RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 CEP250Q9BV73 2442 aa5.4□□□□□ -1.55
COMMD3-215ENST00000602574 FRYQ5TBA9 3013 aa5.39□□□□□ -1.55
COMMD3-215ENST00000602574 WDFY3Q8IZQ1 3526 aa5.39□□□□□ -1.55
COMMD3-215ENST00000602574 NBEAQ8NFP9 2946 aa5.39□□□□□ -1.55
COMMD3-215ENST00000602574 KRTAP4-16G5E9R7 235 aaPredicted RBP5.39□□□□□ -1.55
COMMD3-215ENST00000602574 CSNK1G2-AS1Q8NCQ2 148 aa5.39□□□□□ -1.55
COMMD3-215ENST00000602574 C10orf99Q6UWK7 81 aa5.38□□□□□ -1.55
COMMD3-215ENST00000602574 DEFB105AQ8NG35 78 aa5.38□□□□□ -1.55
COMMD3-215ENST00000602574 GPR179Q6PRD1 2367 aa5.38□□□□□ -1.55
COMMD3-215ENST00000602574 IGLV7-43P04211 117 aa5.37□□□□□ -1.55
COMMD3-215ENST00000602574 CLPSL2Q6UWE3 100 aa5.37□□□□□ -1.55
COMMD3-215ENST00000602574 CAMK2N2Q96S95 79 aa5.37□□□□□ -1.55
COMMD3-215ENST00000602574 SPEGQ15772 3267 aa5.37□□□□□ -1.55
COMMD3-215ENST00000602574 TNRC18O15417 2968 aaPredicted RBP5.37□□□□□ -1.55
COMMD3-215ENST00000602574 KMT2BQ9UMN6 2715 aaPredicted RBP5.37□□□□□ -1.55
COMMD3-215ENST00000602574 Q6ZRX8 168 aa5.37□□□□□ -1.55
COMMD3-215ENST00000602574 C6orf48Q9UBA6 75 aa5.37□□□□□ -1.55
COMMD3-215ENST00000602574 EGFEM1PQ0D2K5 195 aa5.36□□□□□ -1.55
COMMD3-215ENST00000602574 FRYLO94915 3013 aa5.36□□□□□ -1.55
COMMD3-215ENST00000602574 ABCA2Q9BZC7 2435 aa5.36□□□□□ -1.55
COMMD3-215ENST00000602574 FAM168BA1KXE4 195 aa5.35□□□□□ -1.55
COMMD3-215ENST00000602574 KRTAP15-1Q3LI76 137 aa5.35□□□□□ -1.55
COMMD3-215ENST00000602574 PRO0255Q9UI72 69 aa5.35□□□□□ -1.55
COMMD3-215ENST00000602574 PIEZO2Q9H5I5 2752 aa5.35□□□□□ -1.55
COMMD3-215ENST00000602574 WNK1Q9H4A3 2382 aa5.34□□□□□ -1.55
COMMD3-215ENST00000602574 EP300Q09472 2414 aaPredicted RBP5.34□□□□□ -1.55
COMMD3-215ENST00000602574 OTOGLQ3ZCN5 2332 aa5.34□□□□□ -1.55
COMMD3-215ENST00000602574 TLX1NBP0CAT3 122 aa5.34□□□□□ -1.55
COMMD3-215ENST00000602574 ALMS1Q8TCU4 4167 aa5.34□□□□□ -1.55
COMMD3-215ENST00000602574 A0A087WTM6 91 aa5.34□□□□□ -1.56
COMMD3-215ENST00000602574 RPL37AP8A6NKH3 93 aa5.34□□□□□ -1.56
COMMD3-215ENST00000602574 IGFL1Q6UW32 110 aa5.34□□□□□ -1.56
COMMD3-215ENST00000602574 SPRR1AP35321 89 aa5.33□□□□□ -1.56
COMMD3-215ENST00000602574 RPL37AP61513 92 aaKnown RBP5.33□□□□□ -1.56
COMMD3-215ENST00000602574 LINC00304Q8N9R0 145 aa5.33□□□□□ -1.56
COMMD3-215ENST00000602574 TRIOBPQ9H2D6 2365 aa5.33□□□□□ -1.56
COMMD3-215ENST00000602574 J3QL48 77 aa5.32□□□□□ -1.56
COMMD3-215ENST00000602574 GIG44P09565 113 aaPredicted RBP5.32□□□□□ -1.56
COMMD3-215ENST00000602574 DSPP15924 2871 aaKnown RBP5.32□□□□□ -1.56
COMMD3-215ENST00000602574 FREM2Q5SZK8 3169 aa5.32□□□□□ -1.56
COMMD3-215ENST00000602574 CFAP47Q6ZTR5 3102 aa5.32□□□□□ -1.56
COMMD3-215ENST00000602574 DEFB136Q30KP8 78 aa5.31□□□□□ -1.56
COMMD3-215ENST00000602574 RP1L1Q8IWN7 2480 aaPredicted RBP5.31□□□□□ -1.56
COMMD3-215ENST00000602574 NCOR1O75376 2440 aa5.3□□□□□ -1.56
COMMD3-215ENST00000602574 MAP1BP46821 2468 aaKnown RBP5.29□□□□□ -1.56
COMMD3-215ENST00000602574 PLA2G2DQ9UNK4 145 aa5.29□□□□□ -1.56
COMMD3-215ENST00000602574 ACACAQ13085 2346 aa5.28□□□□□ -1.56
COMMD3-215ENST00000602574 COL6A6A6NMZ7 2263 aa5.28□□□□□ -1.56
COMMD3-215ENST00000602574 SPINT4Q6UDR6 99 aa5.28□□□□□ -1.56
COMMD3-215ENST00000602574 CACNA1HO95180 2353 aa5.28□□□□□ -1.56
COMMD3-215ENST00000602574 MUC3AQ02505 3323 aa5.27□□□□□ -1.57
COMMD3-215ENST00000602574 LELP1Q5T871 98 aa5.27□□□□□ -1.57
COMMD3-215ENST00000602574 DMDP11532 3685 aa5.27□□□□□ -1.57
COMMD3-215ENST00000602574 LCE2BO14633 110 aa5.25□□□□□ -1.57
COMMD3-215ENST00000602574 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.25□□□□□ -1.571e-7■■■■□ 21.5
COMMD3-215ENST00000602574 KRTAP11-1Q8IUC1 163 aa5.24□□□□□ -1.57
COMMD3-215ENST00000602574 ANAPC11Q9NYG5 84 aa5.24□□□□□ -1.57
COMMD3-215ENST00000602574 KALRNO60229 2985 aa5.23□□□□□ -1.57
COMMD3-215ENST00000602574 LY6G6CO95867 125 aa5.23□□□□□ -1.57
COMMD3-215ENST00000602574 WDFY4Q6ZS81 3184 aa5.22□□□□□ -1.57
COMMD3-215ENST00000602574 DEFB130BP0DP73 79 aa5.21□□□□□ -1.58
COMMD3-215ENST00000602574 DEFB130AP0DP74 79 aa5.21□□□□□ -1.58
COMMD3-215ENST00000602574 KRTAP13-3Q3SY46 172 aa5.21□□□□□ -1.58
COMMD3-215ENST00000602574 Q96NJ1 140 aa5.21□□□□□ -1.58
COMMD3-215ENST00000602574 PTPRZ1P23471 2315 aaPredicted RBP5.2□□□□□ -1.58
COMMD3-215ENST00000602574 PRRC2CQ9Y520 2896 aaKnown RBP5.2□□□□□ -1.58
COMMD3-215ENST00000602574 LOC100996750A0A140TA64 210 aa5.2□□□□□ -1.58
COMMD3-215ENST00000602574 MRPL34Q9BQ48 92 aaKnown RBP5.2□□□□□ -1.58
COMMD3-215ENST00000602574 KRTAP4-6Q9BYQ5 205 aa5.2□□□□□ -1.58
COMMD3-215ENST00000602574 H3BNG1 76 aa5.19□□□□□ -1.58
COMMD3-215ENST00000602574 CIRBP-AS1Q8TBR5 109 aa5.18□□□□□ -1.58
COMMD3-215ENST00000602574 ANKRD17O75179 2603 aaKnown RBP5.17□□□□□ -1.58
COMMD3-215ENST00000602574 CELSR3Q9NYQ7 3312 aa5.17□□□□□ -1.58
COMMD3-215ENST00000602574 HRNRQ86YZ3 2850 aaPredicted RBP5.17□□□□□ -1.58
COMMD3-215ENST00000602574 PANO1I0J062 215 aa5.17□□□□□ -1.58
COMMD3-215ENST00000602574 SPRR1BP22528 89 aa5.16□□□□□ -1.58
COMMD3-215ENST00000602574 DMXL2Q8TDJ6 3036 aa5.16□□□□□ -1.58
COMMD3-215ENST00000602574 A0A1B0GVX0 72 aa5.16□□□□□ -1.58
COMMD3-215ENST00000602574 NBDYA0A0U1RRE5 68 aa5.15□□□□□ -1.58
COMMD3-215ENST00000602574 C15orf56Q8N910 161 aa5.15□□□□□ -1.58
COMMD3-215ENST00000602574 ANKRD11Q6UB99 2663 aaPredicted RBP5.15□□□□□ -1.58
COMMD3-215ENST00000602574 SSBP3-AS1Q7Z2R9 100 aa5.14□□□□□ -1.59
COMMD3-215ENST00000602574 H0YAA0 97 aa5.14□□□□□ -1.59
COMMD3-215ENST00000602574 SPART-AS1P0CW21 52 aa5.14□□□□□ -1.59
COMMD3-215ENST00000602574 SPENQ96T58 3664 aaKnown RBP5.14□□□□□ -1.59
COMMD3-215ENST00000602574 SPTA1P02549 2419 aa5.13□□□□□ -1.59
COMMD3-215ENST00000602574 CAMK2N1Q7Z7J9 78 aa5.13□□□□□ -1.59
COMMD3-215ENST00000602574 PSORS1C2Q9UIG4 136 aa5.13□□□□□ -1.59
COMMD3-215ENST00000602574 SPTAN1Q13813 2472 aaKnown RBP5.12□□□□□ -1.59
COMMD3-215ENST00000602574 DCHS1Q96JQ0 3298 aa5.12□□□□□ -1.59
COMMD3-215ENST00000602574 HIVEP3Q5T1R4 2406 aa5.12□□□□□ -1.59
COMMD3-215ENST00000602574 A0A096LPF7 62 aa5.11□□□□□ -1.59
COMMD3-215ENST00000602574 BSNQ9UPA5 3926 aa5.11□□□□□ -1.59
COMMD3-215ENST00000602574 A0A0G2JQZ4 141 aa5.11□□□□□ -1.59
COMMD3-215ENST00000602574 A0A1W2PNN7 141 aa5.11□□□□□ -1.59
COMMD3-215ENST00000602574 TLN1Q9Y490 2541 aaKnown RBP5.1□□□□□ -1.59
COMMD3-215ENST00000602574 TACC2O95359 2948 aa5.09□□□□□ -1.59
COMMD3-215ENST00000602574 BDP1A6H8Y1 2624 aa5.09□□□□□ -1.59
COMMD3-215ENST00000602574 DCHS2Q6V1P9 2916 aa5.08□□□□□ -1.6
COMMD3-215ENST00000602574 LOC400499M0QZD8 3231 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 196.5 ms