RNA–Protein interactions for RNA: ENST00000600387.5

ARHGEF1-221, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 2,272 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-221ENST00000600387 Q6ZTC4 211 aa12.21□□□□□ -0.45
ARHGEF1-221ENST00000600387 H3BNG1 76 aa12.21□□□□□ -0.46
ARHGEF1-221ENST00000600387 ESRGQ1W209 222 aa12.21□□□□□ -0.46
ARHGEF1-221ENST00000600387 FAM229BQ4G0N7 80 aa12.21□□□□□ -0.46
ARHGEF1-221ENST00000600387 DEFB105AQ8NG35 78 aa12.21□□□□□ -0.46
ARHGEF1-221ENST00000600387 HIGD2AQ9BW72 106 aa12.21□□□□□ -0.46
ARHGEF1-221ENST00000600387 NKAPP1Q8N9T2 125 aa12.2□□□□□ -0.46
ARHGEF1-221ENST00000600387 C1orf43Q9BWL3 253 aa12.2□□□□□ -0.46
ARHGEF1-221ENST00000600387 DHRS4-AS1Q9P1J3 65 aa12.17□□□□□ -0.46
ARHGEF1-221ENST00000600387 SYCNQ0VAF6 134 aa12.16□□□□□ -0.46
ARHGEF1-221ENST00000600387 SMIM29Q86T20 159 aa12.16□□□□□ -0.46
ARHGEF1-221ENST00000600387 PDZD2O15018 2839 aa12.16□□□□□ -0.46
ARHGEF1-221ENST00000600387 MPLKIPQ8TAP9 179 aa12.16□□□□□ -0.46
ARHGEF1-221ENST00000600387 C7orf33Q8WU49 177 aa12.16□□□□□ -0.46
ARHGEF1-221ENST00000600387 BRK1Q8WUW1 75 aa12.16□□□□□ -0.46
ARHGEF1-221ENST00000600387 LCE6AA0A183 80 aa12.15□□□□□ -0.46
ARHGEF1-221ENST00000600387 FAM30AQ9NZY2 134 aa12.14□□□□□ -0.47
ARHGEF1-221ENST00000600387 A0A1W2PNM2 257 aa12.13□□□□□ -0.47
ARHGEF1-221ENST00000600387 SERTAD4-AS1Q5TG53 156 aa12.13□□□□□ -0.47
ARHGEF1-221ENST00000600387 VWFP04275 2813 aa12.13□□□□□ -0.47
ARHGEF1-221ENST00000600387 Q6ZRX8 168 aa12.12□□□□□ -0.47
ARHGEF1-221ENST00000600387 TNP2Q05952 138 aa12.11□□□□□ -0.47
ARHGEF1-221ENST00000600387 C1orf137Q5JT78 98 aa12.11□□□□□ -0.47
ARHGEF1-221ENST00000600387 IGKV2D-24A0A075B6R9 120 aa12.11□□□□□ -0.47
ARHGEF1-221ENST00000600387 PLA2G2DQ9UNK4 145 aa12.11□□□□□ -0.47
ARHGEF1-221ENST00000600387 Q8NBF4 154 aa12.1□□□□□ -0.47
ARHGEF1-221ENST00000600387 PKIGQ9Y2B9 76 aa12.09□□□□□ -0.47
ARHGEF1-221ENST00000600387 LINC01556Q5JQF7 62 aa12.08□□□□□ -0.48
ARHGEF1-221ENST00000600387 SPRR4Q96PI1 79 aa12.08□□□□□ -0.48
ARHGEF1-221ENST00000600387 SMR3AQ99954 134 aa12.08□□□□□ -0.48
ARHGEF1-221ENST00000600387 KRTAP4-16G5E9R7 235 aaPredicted RBP12.08□□□□□ -0.48
ARHGEF1-221ENST00000600387 TLX1NBP0CAT3 122 aa12.08□□□□□ -0.48
ARHGEF1-221ENST00000600387 Q9BRP9 147 aa12.08□□□□□ -0.48
ARHGEF1-221ENST00000600387 hDV103S1A0JD37 113 aa12.07□□□□□ -0.48
ARHGEF1-221ENST00000600387 ETDCA0A1B0GVM5 59 aa12.06□□□□□ -0.48
ARHGEF1-221ENST00000600387 SPRR1AP35321 89 aa12.06□□□□□ -0.48
ARHGEF1-221ENST00000600387 IGLV1-50A0A075B6I6 118 aa12.05□□□□□ -0.48
ARHGEF1-221ENST00000600387 IGLV5-37A0A075B6J1 123 aa12.04□□□□□ -0.48
ARHGEF1-221ENST00000600387 ZCCHC13Q8WW36 166 aaKnown RBP12.04□□□□□ -0.48
ARHGEF1-221ENST00000600387 DSCR10P59022 87 aa12.04□□□□□ -0.48
ARHGEF1-221ENST00000600387 RPL37AP8A6NKH3 93 aa12.03□□□□□ -0.48
ARHGEF1-221ENST00000600387 HIVEP1P15822 2718 aa12.02□□□□□ -0.49
ARHGEF1-221ENST00000600387 ST20-AS1Q8NBB2 130 aa12.02□□□□□ -0.49
ARHGEF1-221ENST00000600387 K7EQZ3 153 aa12□□□□□ -0.49
ARHGEF1-221ENST00000600387 Q1T7F1 81 aa11.99□□□□□ -0.49
ARHGEF1-221ENST00000600387 C1orf64Q8NEQ6 169 aa11.99□□□□□ -0.49
ARHGEF1-221ENST00000600387 C1orf195Q5TG92 126 aa11.98□□□□□ -0.49
ARHGEF1-221ENST00000600387 RETNQ9HD89 108 aa11.98□□□□□ -0.49
ARHGEF1-221ENST00000600387 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.97□□□□□ -0.49
ARHGEF1-221ENST00000600387 FAM168BA1KXE4 195 aa11.97□□□□□ -0.49
ARHGEF1-221ENST00000600387 HCG22E2RYF7 251 aa11.97□□□□□ -0.49
ARHGEF1-221ENST00000600387 ITPR2Q14571 2701 aa11.96□□□□□ -0.49
ARHGEF1-221ENST00000600387 CYP4F30PQ9H0H9 118 aa11.95□□□□□ -0.5
ARHGEF1-221ENST00000600387 NOTCH2Q04721 2471 aa11.94□□□□□ -0.5
ARHGEF1-221ENST00000600387 DNAH10OSP0CZ25 163 aa11.94□□□□□ -0.5
ARHGEF1-221ENST00000600387 TENM4Q6N022 2769 aa11.94□□□□□ -0.5
ARHGEF1-221ENST00000600387 UNC79Q9P2D8 2635 aa11.94□□□□□ -0.5
ARHGEF1-221ENST00000600387 UBE2BP63146 152 aa11.93□□□□□ -0.5
ARHGEF1-221ENST00000600387 MRPL55Q7Z7F7 128 aaKnown RBP11.93□□□□□ -0.5
ARHGEF1-221ENST00000600387 DEFB131BA0A096LNP1 70 aa11.91□□□□□ -0.5
ARHGEF1-221ENST00000600387 NDUFB1O75438 58 aa11.91□□□□□ -0.5
ARHGEF1-221ENST00000600387 KRTAP7-1Q8IUC3 87 aa11.91□□□□□ -0.5
ARHGEF1-221ENST00000600387 PSCAO43653 123 aa11.91□□□□□ -0.5
ARHGEF1-221ENST00000600387 LRCOL1A6NCL2 159 aa11.9□□□□□ -0.5
ARHGEF1-221ENST00000600387 LINC00476Q8WZB0 136 aa11.9□□□□□ -0.5
ARHGEF1-221ENST00000600387 J3QKU1 62 aa11.89□□□□□ -0.51
ARHGEF1-221ENST00000600387 PRR15Q8IV56 129 aa11.89□□□□□ -0.51
ARHGEF1-221ENST00000600387 TENM1Q9UKZ4 2725 aa11.88□□□□□ -0.51
ARHGEF1-221ENST00000600387 INAFM1C9JVW0 142 aa11.88□□□□□ -0.51
ARHGEF1-221ENST00000600387 REG3GQ6UW15 175 aa11.88□□□□□ -0.51
ARHGEF1-221ENST00000600387 V9GYY9 64 aa11.86□□□□□ -0.51
ARHGEF1-221ENST00000600387 MP68P56378 58 aa11.85□□□□□ -0.51
ARHGEF1-221ENST00000600387 IGFL1Q6UW32 110 aa11.85□□□□□ -0.51
ARHGEF1-221ENST00000600387 C11orf45Q8TAV5 145 aa11.85□□□□□ -0.51
ARHGEF1-221ENST00000600387 PKD1L1Q8TDX9 2849 aa11.83□□□□□ -0.52
ARHGEF1-221ENST00000600387 TRAV22A0A0B4J277 110 aa11.82□□□□□ -0.52
ARHGEF1-221ENST00000600387 CASC10Q5T4H9 136 aa11.82□□□□□ -0.52
ARHGEF1-221ENST00000600387 IGLV8-61A0A075B6I0 122 aa11.81□□□□□ -0.52
ARHGEF1-221ENST00000600387 PRR4Q16378 134 aa11.81□□□□□ -0.52
ARHGEF1-221ENST00000600387 WFDC13Q8IUB5 93 aa11.81□□□□□ -0.52
ARHGEF1-221ENST00000600387 KRTAP10-11P60412 298 aa11.8□□□□□ -0.52
ARHGEF1-221ENST00000600387 OXLD1Q5BKU9 147 aa11.8□□□□□ -0.52
ARHGEF1-221ENST00000600387 TRRAPQ9Y4A5 3859 aa11.8□□□□□ -0.52
ARHGEF1-221ENST00000600387 TEP1Q99973 2627 aaKnown RBP11.8□□□□□ -0.52
ARHGEF1-221ENST00000600387 PSPHP1O15172 72 aa11.79□□□□□ -0.52
ARHGEF1-221ENST00000600387 A0A0G2JQZ4 141 aa11.78□□□□□ -0.52
ARHGEF1-221ENST00000600387 A0A1W2PNN7 141 aa11.78□□□□□ -0.52
ARHGEF1-221ENST00000600387 DEFB116Q30KQ4 102 aa11.78□□□□□ -0.52
ARHGEF1-221ENST00000600387 ATRQ13535 2644 aa11.78□□□□□ -0.52
ARHGEF1-221ENST00000600387 A0A087WSZ3 146 aa11.77□□□□□ -0.52
ARHGEF1-221ENST00000600387 LINC00588Q9Y4M8 146 aa11.77□□□□□ -0.53
ARHGEF1-221ENST00000600387 FASNP49327 2511 aaKnown RBP11.77□□□□□ -0.53
ARHGEF1-221ENST00000600387 H3BPC8 53 aa11.76□□□□□ -0.53
ARHGEF1-221ENST00000600387 B9D2Q9BPU9 175 aa11.76□□□□□ -0.53
ARHGEF1-221ENST00000600387 KRTAP29-1A8MX34 341 aaPredicted RBP11.75□□□□□ -0.53
ARHGEF1-221ENST00000600387 LINC00208Q96KT6 92 aa11.75□□□□□ -0.53
ARHGEF1-221ENST00000600387 SPANXA2-OT1Q8N9U9 137 aa11.75□□□□□ -0.53
ARHGEF1-221ENST00000600387 NSD1Q96L73 2696 aaPredicted RBP11.73□□□□□ -0.53
ARHGEF1-221ENST00000600387 KMT2BQ9UMN6 2715 aaPredicted RBP11.72□□□□□ -0.53
ARHGEF1-221ENST00000600387 RPL37AP61513 92 aaKnown RBP11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms