RNA–Protein interactions for RNA: ENST00000594213.5

GTF2F1-203, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 1,002 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-203ENST00000594213 ZNF73O43830 326 aaPredicted RBP8.69□□□□□ -1.02
GTF2F1-203ENST00000594213 PLNP26678 52 aa8.69□□□□□ -1.02
GTF2F1-203ENST00000594213 NDUFA5Q16718 116 aa8.69□□□□□ -1.02
GTF2F1-203ENST00000594213 S100A7L2Q5SY68 101 aa8.69□□□□□ -1.02
GTF2F1-203ENST00000594213 C9orf153Q5TBE3 101 aa8.69□□□□□ -1.02
GTF2F1-203ENST00000594213 LEPROTL1O95214 131 aa8.68□□□□□ -1.02
GTF2F1-203ENST00000594213 ADAMTSL4-AS1Q5T5F5 129 aa8.68□□□□□ -1.02
GTF2F1-203ENST00000594213 SPRR1BP22528 89 aa8.67□□□□□ -1.02
GTF2F1-203ENST00000594213 MT1HP80294 61 aa8.67□□□□□ -1.02
GTF2F1-203ENST00000594213 MIEN1Q9BRT3 115 aa8.67□□□□□ -1.02
GTF2F1-203ENST00000594213 DPM2O94777 84 aa8.66□□□□□ -1.02
GTF2F1-203ENST00000594213 SERF1AO75920 110 aa8.65□□□□□ -1.02
GTF2F1-203ENST00000594213 LGALS3P17931 250 aaKnown RBP8.65□□□□□ -1.02
GTF2F1-203ENST00000594213 HERVK_113P61574 105 aa8.65□□□□□ -1.02
GTF2F1-203ENST00000594213 PMCHL2Q9BQD1 86 aa8.65□□□□□ -1.02
GTF2F1-203ENST00000594213 A0A0J9YXY3 114 aa8.64□□□□□ -1.03
GTF2F1-203ENST00000594213 TRGC2P03986 189 aa8.64□□□□□ -1.03
GTF2F1-203ENST00000594213 PCOTHQ58A44 107 aa8.64□□□□□ -1.03
GTF2F1-203ENST00000594213 IGKCP01834 107 aa8.63□□□□□ -1.03
GTF2F1-203ENST00000594213 S100A1P23297 94 aa8.63□□□□□ -1.03
GTF2F1-203ENST00000594213 NPC2P61916 151 aa8.62□□□□□ -1.03
GTF2F1-203ENST00000594213 HSPB8Q9UJY1 196 aa8.62□□□□□ -1.03
GTF2F1-203ENST00000594213 FABP4P15090 132 aa8.61□□□□□ -1.03
GTF2F1-203ENST00000594213 IGLV8-61A0A075B6I0 122 aa8.6□□□□□ -1.03
GTF2F1-203ENST00000594213 LITAFQ99732 161 aa8.6□□□□□ -1.03
GTF2F1-203ENST00000594213 LIMD2Q9BT23 127 aa8.6□□□□□ -1.03
GTF2F1-203ENST00000594213 CBY1Q9Y3M2 126 aa8.6□□□□□ -1.03
GTF2F1-203ENST00000594213 E9PLD3 99 aa8.59□□□□□ -1.03
GTF2F1-203ENST00000594213 HINT1P49773 126 aaPredicted RBP8.59□□□□□ -1.03
GTF2F1-203ENST00000594213 HRCT1Q6UXD1 115 aa8.59□□□□□ -1.03
GTF2F1-203ENST00000594213 C9orf92A6NGG3 77 aa8.58□□□□□ -1.04
GTF2F1-203ENST00000594213 CFC1BP0CG36 223 aa8.58□□□□□ -1.04
GTF2F1-203ENST00000594213 SLC25A34Q6PIV7 304 aa8.58□□□□□ -1.04
GTF2F1-203ENST00000594213 LINC00308Q8TCZ7 52 aa8.58□□□□□ -1.04
GTF2F1-203ENST00000594213 DHRS4-AS1Q9P1J3 65 aa8.58□□□□□ -1.04
GTF2F1-203ENST00000594213 LORP23490 312 aaPredicted RBP8.57□□□□□ -1.04
GTF2F1-203ENST00000594213 SPANXCQ9NY87 97 aa8.57□□□□□ -1.04
GTF2F1-203ENST00000594213 CD164Q04900 197 aa8.56□□□□□ -1.04
GTF2F1-203ENST00000594213 LAMTOR3Q9UHA4 124 aa8.56□□□□□ -1.04
GTF2F1-203ENST00000594213 TIMM17BO60830 172 aa8.54□□□□□ -1.04
GTF2F1-203ENST00000594213 ELOF1P60002 83 aaKnown RBP8.54□□□□□ -1.04
GTF2F1-203ENST00000594213 KRTAP10-6P60371 365 aaPredicted RBP8.54□□□□□ -1.04
GTF2F1-203ENST00000594213 Q5XG85 94 aa8.54□□□□□ -1.04
GTF2F1-203ENST00000594213 OR13C6PQ8NH95 151 aa8.54□□□□□ -1.04
GTF2F1-203ENST00000594213 SPANXDQ9BXN6 97 aa8.54□□□□□ -1.04
GTF2F1-203ENST00000594213 FLGP20930 4061 aaPredicted RBP8.54□□□□□ -1.04
GTF2F1-203ENST00000594213 COX7BP24311 80 aa8.51□□□□□ -1.05
GTF2F1-203ENST00000594213 SMIM29Q86T20 159 aa8.51□□□□□ -1.05
GTF2F1-203ENST00000594213 PRO1933Q9H354 126 aa8.51□□□□□ -1.05
GTF2F1-203ENST00000594213 Q1RN00 199 aa8.5□□□□□ -1.05
GTF2F1-203ENST00000594213 C6orf99Q4VX62 202 aa8.5□□□□□ -1.05
GTF2F1-203ENST00000594213 C1orf195Q5TG92 126 aa8.5□□□□□ -1.05
GTF2F1-203ENST00000594213 COLCA2A8K830 154 aa8.49□□□□□ -1.05
GTF2F1-203ENST00000594213 SYS1-DBNDD2H3BUS1 97 aa8.49□□□□□ -1.05
GTF2F1-203ENST00000594213 TAL2Q16559 108 aa8.49□□□□□ -1.05
GTF2F1-203ENST00000594213 TEX49A0A1B0GTD5 131 aa8.48□□□□□ -1.05
GTF2F1-203ENST00000594213 H7C2G1 150 aa8.48□□□□□ -1.05
GTF2F1-203ENST00000594213 LINC00518Q8N0U6 118 aa8.48□□□□□ -1.05
GTF2F1-203ENST00000594213 DEFB105AQ8NG35 78 aa8.48□□□□□ -1.05
GTF2F1-203ENST00000594213 TRBV7-6A0A0J9YX20 115 aa8.47□□□□□ -1.05
GTF2F1-203ENST00000594213 AKR1D1P51857 326 aa8.46□□□□□ -1.06
GTF2F1-203ENST00000594213 RPL37P61927 97 aaKnown RBP8.46□□□□□ -1.06
GTF2F1-203ENST00000594213 LINC01545Q5VT33 79 aa8.46□□□□□ -1.06
GTF2F1-203ENST00000594213 TTTY13Q9BZ97 58 aa8.46□□□□□ -1.06
GTF2F1-203ENST00000594213 IGLV5-48A0A075B6I7 105 aa8.45□□□□□ -1.06
GTF2F1-203ENST00000594213 ZNF815PA8K554 130 aa8.45□□□□□ -1.06
GTF2F1-203ENST00000594213 A0A0G2JQZ4 141 aa8.44□□□□□ -1.06
GTF2F1-203ENST00000594213 PET117Q6UWS5 81 aa8.42□□□□□ -1.06
GTF2F1-203ENST00000594213 A0A1B0GWB2 263 aa8.41□□□□□ -1.06
GTF2F1-203ENST00000594213 M0R2T5 61 aa8.39□□□□□ -1.07
GTF2F1-203ENST00000594213 HIST1H2BKO60814 126 aa8.38□□□□□ -1.07
GTF2F1-203ENST00000594213 HIST1H2BJP06899 126 aa8.38□□□□□ -1.07
GTF2F1-203ENST00000594213 HIST1H2BOP23527 126 aa8.38□□□□□ -1.07
GTF2F1-203ENST00000594213 HIST1H2BBP33778 126 aa8.38□□□□□ -1.07
GTF2F1-203ENST00000594213 HIST1H2BDP58876 126 aa8.38□□□□□ -1.07
GTF2F1-203ENST00000594213 HIST1H2BCP62807 126 aa8.38□□□□□ -1.07
GTF2F1-203ENST00000594213 HIST2H2BEQ16778 126 aa8.38□□□□□ -1.07
GTF2F1-203ENST00000594213 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.38□□□□□ -1.07
GTF2F1-203ENST00000594213 SLC7A5P1Q8MH63 180 aa8.38□□□□□ -1.07
GTF2F1-203ENST00000594213 HIST1H2BHQ93079 126 aa8.38□□□□□ -1.07
GTF2F1-203ENST00000594213 HIST1H2BNQ99877 126 aa8.38□□□□□ -1.07
GTF2F1-203ENST00000594213 HIST1H2BMQ99879 126 aa8.38□□□□□ -1.07
GTF2F1-203ENST00000594213 IFITM1P13164 125 aa8.36□□□□□ -1.07
GTF2F1-203ENST00000594213 COX6B2Q6YFQ2 88 aa8.36□□□□□ -1.07
GTF2F1-203ENST00000594213 C3orf79P0CE67 100 aa8.35□□□□□ -1.07
GTF2F1-203ENST00000594213 A4D1N5 150 aa8.34□□□□□ -1.07
GTF2F1-203ENST00000594213 A6NDN8 102 aa8.34□□□□□ -1.07
GTF2F1-203ENST00000594213 TCL1BO95988 128 aa8.34□□□□□ -1.07
GTF2F1-203ENST00000594213 SCGB1D4Q6XE38 83 aa8.33□□□□□ -1.08
GTF2F1-203ENST00000594213 Q6ZVH6 145 aa8.33□□□□□ -1.08
GTF2F1-203ENST00000594213 ANKRD39Q53RE8 183 aa8.32□□□□□ -1.08
GTF2F1-203ENST00000594213 MUSTN1Q8IVN3 82 aa8.32□□□□□ -1.08
GTF2F1-203ENST00000594213 COPS9Q8WXC6 57 aa8.32□□□□□ -1.08
GTF2F1-203ENST00000594213 SMIM11BQ8TCY0 68 aa8.31□□□□□ -1.08
GTF2F1-203ENST00000594213 NHP2Q9NX24 153 aaKnown RBP8.3□□□□□ -1.08
GTF2F1-203ENST00000594213 TRAV13-2A0A0B4J235 113 aa8.28□□□□□ -1.08
GTF2F1-203ENST00000594213 COA6Q5JTJ3 125 aaKnown RBP8.28□□□□□ -1.08
GTF2F1-203ENST00000594213 KRTDAPP60985 99 aa8.27□□□□□ -1.09
GTF2F1-203ENST00000594213 PCP2Q8IVA1 136 aa8.27□□□□□ -1.09
GTF2F1-203ENST00000594213 LINC00575Q6W349 94 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms