RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 IGKV2D-24A0A075B6R9 120 aa10.86□□□□□ -0.67
LIG1-206ENST00000594067 Q6ZRP5 223 aa10.86□□□□□ -0.67
LIG1-206ENST00000594067 TM2D3Q9BRN9 247 aa10.86□□□□□ -0.67
LIG1-206ENST00000594067 LINC00528Q8N1L1 170 aa10.84□□□□□ -0.67
LIG1-206ENST00000594067 F8WEM9 126 aa10.84□□□□□ -0.67
LIG1-206ENST00000594067 ANK2Q01484 3957 aa10.82□□□□□ -0.68
LIG1-206ENST00000594067 DEFB131BA0A096LNP1 70 aa10.81□□□□□ -0.68
LIG1-206ENST00000594067 SYCNQ0VAF6 134 aa10.81□□□□□ -0.68
LIG1-206ENST00000594067 LINC01556Q5JQF7 62 aa10.8□□□□□ -0.68
LIG1-206ENST00000594067 TENM3Q9P273 2699 aa10.79□□□□□ -0.68
LIG1-206ENST00000594067 NREPQ16612 68 aa10.78□□□□□ -0.68
LIG1-206ENST00000594067 SERTAD4-AS1Q5TG53 156 aa10.78□□□□□ -0.68
LIG1-206ENST00000594067 BPY2O14599 106 aa10.78□□□□□ -0.68
LIG1-206ENST00000594067 Q8N9L7 120 aa10.77□□□□□ -0.69
LIG1-206ENST00000594067 C11orf45Q8TAV5 145 aa10.77□□□□□ -0.69
LIG1-206ENST00000594067 NDUFC1O43677 76 aa10.77□□□□□ -0.69
LIG1-206ENST00000594067 NKAPP1Q8N9T2 125 aa10.77□□□□□ -0.69
LIG1-206ENST00000594067 DEFB105AQ8NG35 78 aa10.76□□□□□ -0.69
LIG1-206ENST00000594067 C7orf33Q8WU49 177 aa10.75□□□□□ -0.69
LIG1-206ENST00000594067 IGKV4-1P06312 121 aa10.75□□□□□ -0.69
LIG1-206ENST00000594067 FP248Q71RG6 208 aaPredicted RBP10.74□□□□□ -0.69
LIG1-206ENST00000594067 TMEM254Q8TBM7 123 aa10.74□□□□□ -0.69
LIG1-206ENST00000594067 KCNQ1DNQ9H478 68 aa10.73□□□□□ -0.69
LIG1-206ENST00000594067 SMIM26A0A096LP01 95 aa10.73□□□□□ -0.69
LIG1-206ENST00000594067 F8WDY8 70 aa10.72□□□□□ -0.69
LIG1-206ENST00000594067 ERC2-IT1O76042 136 aa10.72□□□□□ -0.69
LIG1-206ENST00000594067 CMYA5Q8N3K9 4069 aa10.71□□□□□ -0.69
LIG1-206ENST00000594067 RPL37AP8A6NKH3 93 aa10.71□□□□□ -0.7
LIG1-206ENST00000594067 DNAH10OSP0CZ25 163 aa10.71□□□□□ -0.7
LIG1-206ENST00000594067 OCR1Q9BZK8 76 aa10.71□□□□□ -0.7
LIG1-206ENST00000594067 CASC10Q5T4H9 136 aa10.7□□□□□ -0.7
LIG1-206ENST00000594067 Q8N377 158 aa10.7□□□□□ -0.7
LIG1-206ENST00000594067 FAM168BA1KXE4 195 aa10.7□□□□□ -0.7
LIG1-206ENST00000594067 C3orf84H3BNL1 204 aa10.7□□□□□ -0.7
LIG1-206ENST00000594067 LINC00336Q6ZUF6 198 aa10.69□□□□□ -0.7
LIG1-206ENST00000594067 ATP5EP56381 51 aaPredicted RBP10.69□□□□□ -0.7
LIG1-206ENST00000594067 KRTAP24-1Q3LI83 254 aa10.68□□□□□ -0.7
LIG1-206ENST00000594067 LINC00474Q9P2X8 69 aa10.68□□□□□ -0.7
LIG1-206ENST00000594067 LINC00588Q9Y4M8 146 aa10.66□□□□□ -0.7
LIG1-206ENST00000594067 A0A0U1RQV1 116 aa10.66□□□□□ -0.7
LIG1-206ENST00000594067 IGLV5-48A0A075B6I7 105 aa10.65□□□□□ -0.7
LIG1-206ENST00000594067 TLX1NBP0CAT3 122 aa10.65□□□□□ -0.7
LIG1-206ENST00000594067 Q9BRP9 147 aa10.65□□□□□ -0.7
LIG1-206ENST00000594067 MRAPQ8TCY5 172 aa10.64□□□□□ -0.71
LIG1-206ENST00000594067 F8P00451 2351 aa10.64□□□□□ -0.71
LIG1-206ENST00000594067 STAB1Q9NY15 2570 aa10.64□□□□□ -0.71
LIG1-206ENST00000594067 FLNBO75369 2602 aaKnown RBP10.64□□□□□ -0.71
LIG1-206ENST00000594067 Q6ZRX8 168 aa10.64□□□□□ -0.71
LIG1-206ENST00000594067 FBN1P35555 2871 aaKnown RBP10.63□□□□□ -0.71
LIG1-206ENST00000594067 IGLV1-50A0A075B6I6 118 aa10.62□□□□□ -0.71
LIG1-206ENST00000594067 ETDCA0A1B0GVM5 59 aa10.62□□□□□ -0.71
LIG1-206ENST00000594067 PRYO14603 147 aa10.62□□□□□ -0.71
LIG1-206ENST00000594067 PRB2P02812 416 aaPredicted RBP10.62□□□□□ -0.71
LIG1-206ENST00000594067 KRTAP7-1Q8IUC3 87 aa10.62□□□□□ -0.71
LIG1-206ENST00000594067 ST20-AS1Q8NBB2 130 aa10.62□□□□□ -0.71
LIG1-206ENST00000594067 DHRS4-AS1Q9P1J3 65 aa10.62□□□□□ -0.71
LIG1-206ENST00000594067 PLA2G2DQ9UNK4 145 aa10.62□□□□□ -0.71
LIG1-206ENST00000594067 KRTAP4-16G5E9R7 235 aaPredicted RBP10.62□□□□□ -0.71
LIG1-206ENST00000594067 PRO0628Q9UI54 55 aa10.62□□□□□ -0.71
LIG1-206ENST00000594067 DNAH3Q8TD57 4116 aa10.61□□□□□ -0.71
LIG1-206ENST00000594067 DNAH1Q9P2D7 4330 aa10.6□□□□□ -0.71
LIG1-206ENST00000594067 HIGD2AQ9BW72 106 aa10.6□□□□□ -0.71
LIG1-206ENST00000594067 MAST4O15021 2626 aa10.6□□□□□ -0.71
LIG1-206ENST00000594067 A0A1W2PNM2 257 aa10.59□□□□□ -0.71
LIG1-206ENST00000594067 FAM229BQ4G0N7 80 aa10.59□□□□□ -0.71
LIG1-206ENST00000594067 IGLV5-37A0A075B6J1 123 aa10.59□□□□□ -0.71
LIG1-206ENST00000594067 SPRR1AP35321 89 aa10.58□□□□□ -0.72
LIG1-206ENST00000594067 NOTCH1P46531 2555 aa10.58□□□□□ -0.72
LIG1-206ENST00000594067 FUSP35637 526 aaKnown RBP eCLIP10.57□□□□□ -0.72
LIG1-206ENST00000594067 C1orf137Q5JT78 98 aa10.57□□□□□ -0.72
LIG1-206ENST00000594067 TNP2Q05952 138 aa10.56□□□□□ -0.72
LIG1-206ENST00000594067 SMIM29Q86T20 159 aa10.56□□□□□ -0.72
LIG1-206ENST00000594067 A0A1B0GW54 56 aa10.56□□□□□ -0.72
LIG1-206ENST00000594067 MRPL55Q7Z7F7 128 aaKnown RBP10.56□□□□□ -0.72
LIG1-206ENST00000594067 UBE2BP63146 152 aa10.54□□□□□ -0.72
LIG1-206ENST00000594067 FAM30AQ9NZY2 134 aa10.54□□□□□ -0.72
LIG1-206ENST00000594067 Q8NBF4 154 aa10.52□□□□□ -0.73
LIG1-206ENST00000594067 LCE6AA0A183 80 aa10.51□□□□□ -0.73
LIG1-206ENST00000594067 HUWE1Q7Z6Z7 4374 aaKnown RBP10.51□□□□□ -0.73
LIG1-206ENST00000594067 MPLKIPQ8TAP9 179 aa10.51□□□□□ -0.73
LIG1-206ENST00000594067 SPRR4Q96PI1 79 aa10.51□□□□□ -0.73
LIG1-206ENST00000594067 DSCR10P59022 87 aa10.5□□□□□ -0.73
LIG1-206ENST00000594067 REG3GQ6UW15 175 aa10.49□□□□□ -0.73
LIG1-206ENST00000594067 A0A0G2JQZ4 141 aa10.47□□□□□ -0.73
LIG1-206ENST00000594067 A0A1W2PNN7 141 aa10.47□□□□□ -0.73
LIG1-206ENST00000594067 BAHCC1Q9P281 2608 aa10.47□□□□□ -0.73
LIG1-206ENST00000594067 DNAH10Q8IVF4 4471 aa10.46□□□□□ -0.74
LIG1-206ENST00000594067 IGKV2-24A0A0C4DH68 120 aa10.45□□□□□ -0.74
LIG1-206ENST00000594067 K7EQZ3 153 aa10.45□□□□□ -0.74
LIG1-206ENST00000594067 K7EIL1 84 aa10.45□□□□□ -0.74
LIG1-206ENST00000594067 BRK1Q8WUW1 75 aa10.44□□□□□ -0.74
LIG1-206ENST00000594067 ZCCHC13Q8WW36 166 aaKnown RBP10.44□□□□□ -0.74
LIG1-206ENST00000594067 LINC00476Q8WZB0 136 aa10.44□□□□□ -0.74
LIG1-206ENST00000594067 A0A096LNI7 61 aa10.43□□□□□ -0.74
LIG1-206ENST00000594067 PRLHP81277 87 aa10.43□□□□□ -0.74
LIG1-206ENST00000594067 KRTAP1-5Q9BYS1 174 aa10.43□□□□□ -0.74
LIG1-206ENST00000594067 hDV103S1A0JD37 113 aa10.42□□□□□ -0.74
LIG1-206ENST00000594067 NBEAL1Q6ZS30 2694 aa10.42□□□□□ -0.74
LIG1-206ENST00000594067 LYSTQ99698 3801 aa10.4□□□□□ -0.74
LIG1-206ENST00000594067 PKIGQ9Y2B9 76 aa10.4□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 127.9 ms