RNA–Protein interactions for RNA: ENST00000592790.1

VMP1-216, Transcript of vacuole membrane protein 1, humanhuman

Gene VMP1, Length 4,325 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-216ENST00000592790 MPLKIPQ8TAP9 179 aa2.41□□□□□ -2.02
VMP1-216ENST00000592790 SORL1Q92673 2214 aa2.41□□□□□ -2.02
VMP1-216ENST00000592790 TRBV7-4A0A0J9YYF1 115 aa2.41□□□□□ -2.02
VMP1-216ENST00000592790 hDV103S1A0JD37 113 aa2.41□□□□□ -2.02
VMP1-216ENST00000592790 DEFB4AO15263 64 aa2.41□□□□□ -2.02
VMP1-216ENST00000592790 B9D2Q9BPU9 175 aa2.41□□□□□ -2.02
VMP1-216ENST00000592790 C11orf45Q8TAV5 145 aa2.41□□□□□ -2.02
VMP1-216ENST00000592790 CELSR2Q9HCU4 2923 aa2.41□□□□□ -2.02
VMP1-216ENST00000592790 H7BZZ5 65 aa2.41□□□□□ -2.02
VMP1-216ENST00000592790 UBE2AP49459 152 aa2.41□□□□□ -2.02
VMP1-216ENST00000592790 PRR15Q8IV56 129 aa2.41□□□□□ -2.02
VMP1-216ENST00000592790 DEFB131BA0A096LNP1 70 aa2.4□□□□□ -2.02
VMP1-216ENST00000592790 C6orf48Q9UBA6 75 aa2.4□□□□□ -2.02
VMP1-216ENST00000592790 TRAV10A0A0B4J240 114 aa2.4□□□□□ -2.03
VMP1-216ENST00000592790 PRR34Q9NV39 138 aa2.4□□□□□ -2.03
VMP1-216ENST00000592790 PIEZO2Q9H5I5 2752 aa2.4□□□□□ -2.03
VMP1-216ENST00000592790 GIG44P09565 113 aaPredicted RBP2.4□□□□□ -2.03
VMP1-216ENST00000592790 PLA2G2AP14555 144 aa2.4□□□□□ -2.03
VMP1-216ENST00000592790 CELA1Q9UNI1 258 aa2.4□□□□□ -2.03
VMP1-216ENST00000592790 HCG22E2RYF7 251 aa2.39□□□□□ -2.03
VMP1-216ENST00000592790 LINC01556Q5JQF7 62 aa2.39□□□□□ -2.03
VMP1-216ENST00000592790 Q8NBF4 154 aa2.39□□□□□ -2.03
VMP1-216ENST00000592790 LIMD2Q9BT23 127 aa2.39□□□□□ -2.03
VMP1-216ENST00000592790 C10orf25Q5T742 122 aa2.39□□□□□ -2.03
VMP1-216ENST00000592790 REG3GQ6UW15 175 aa2.39□□□□□ -2.03
VMP1-216ENST00000592790 FAM30AQ9NZY2 134 aa2.39□□□□□ -2.03
VMP1-216ENST00000592790 PRB1P04280 392 aa2.38□□□□□ -2.03
VMP1-216ENST00000592790 TM2D3Q9BRN9 247 aa2.38□□□□□ -2.03
VMP1-216ENST00000592790 KCNQ1DNQ9H478 68 aa2.38□□□□□ -2.03
VMP1-216ENST00000592790 LINC00474Q9P2X8 69 aa2.38□□□□□ -2.03
VMP1-216ENST00000592790 NANOS2P60321 138 aaKnown RBP2.38□□□□□ -2.03
VMP1-216ENST00000592790 Q6ZRX8 168 aa2.38□□□□□ -2.03
VMP1-216ENST00000592790 C22orf24Q9Y442 160 aa2.38□□□□□ -2.03
VMP1-216ENST00000592790 ZNF706Q9Y5V0 76 aaPredicted RBP2.38□□□□□ -2.03
VMP1-216ENST00000592790 C9orf129Q5T035 196 aaKnown RBP2.38□□□□□ -2.03
VMP1-216ENST00000592790 KRTAP10-9P60411 292 aa2.38□□□□□ -2.03
VMP1-216ENST00000592790 Q8NAQ8 132 aa2.38□□□□□ -2.03
VMP1-216ENST00000592790 H0Y9J4 135 aa2.37□□□□□ -2.03
VMP1-216ENST00000592790 C7orf33Q8WU49 177 aa2.37□□□□□ -2.03
VMP1-216ENST00000592790 BAHCC1Q9P281 2608 aa2.37□□□□□ -2.03
VMP1-216ENST00000592790 TLX1NBP0CAT3 122 aa2.37□□□□□ -2.03
VMP1-216ENST00000592790 SMIM29Q86T20 159 aa2.37□□□□□ -2.03
VMP1-216ENST00000592790 HIGD2AQ9BW72 106 aa2.37□□□□□ -2.03
VMP1-216ENST00000592790 IGKV4-1P06312 121 aa2.37□□□□□ -2.03
VMP1-216ENST00000592790 CASC2Q6XLA1 102 aa2.37□□□□□ -2.03
VMP1-216ENST00000592790 TP53AIP1Q9HCN2 124 aa2.37□□□□□ -2.03
VMP1-216ENST00000592790 COL12A1Q99715 3063 aa2.37□□□□□ -2.03
VMP1-216ENST00000592790 NDUFS5O43920 106 aa2.36□□□□□ -2.03
VMP1-216ENST00000592790 WFDC10BQ8IUB3 73 aa2.36□□□□□ -2.03
VMP1-216ENST00000592790 PRR15LQ9BU68 103 aa2.36□□□□□ -2.03
VMP1-216ENST00000592790 LINC00208Q96KT6 92 aa2.36□□□□□ -2.03
VMP1-216ENST00000592790 IGLV5-48A0A075B6I7 105 aa2.36□□□□□ -2.03
VMP1-216ENST00000592790 PMAIP1Q13794 54 aa2.36□□□□□ -2.03
VMP1-216ENST00000592790 WFDC13Q8IUB5 93 aa2.36□□□□□ -2.03
VMP1-216ENST00000592790 H0Y9P7 68 aa2.36□□□□□ -2.03
VMP1-216ENST00000592790 IGF2RP11717 2491 aa2.35□□□□□ -2.03
VMP1-216ENST00000592790 CHKB-CPT1BH3BT56 60 aa2.35□□□□□ -2.03
VMP1-216ENST00000592790 CYP4F30PQ9H0H9 118 aa2.35□□□□□ -2.03
VMP1-216ENST00000592790 IGLV5-37A0A075B6J1 123 aa2.35□□□□□ -2.03
VMP1-216ENST00000592790 A6NED7 52 aa2.35□□□□□ -2.03
VMP1-216ENST00000592790 Q6ZTC4 211 aa2.35□□□□□ -2.03
VMP1-216ENST00000592790 OCR1Q9BZK8 76 aa2.35□□□□□ -2.03
VMP1-216ENST00000592790 DNAH10OSP0CZ25 163 aa2.35□□□□□ -2.03
VMP1-216ENST00000592790 Q8N9L7 120 aa2.35□□□□□ -2.03
VMP1-216ENST00000592790 Q9BRP9 147 aa2.35□□□□□ -2.03
VMP1-216ENST00000592790 SETD2Q9BYW2 2564 aaPredicted RBP2.35□□□□□ -2.03
VMP1-216ENST00000592790 PKHD1P08F94 4074 aa2.34□□□□□ -2.03
VMP1-216ENST00000592790 Q6ZRP5 223 aa2.34□□□□□ -2.03
VMP1-216ENST00000592790 SPANXA2-OT1Q8N9U9 137 aa2.34□□□□□ -2.03
VMP1-216ENST00000592790 IGLV1-50A0A075B6I6 118 aa2.34□□□□□ -2.03
VMP1-216ENST00000592790 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.34□□□□□ -2.03
VMP1-216ENST00000592790 A0A087WSZ3 146 aa2.34□□□□□ -2.03
VMP1-216ENST00000592790 FP248Q71RG6 208 aaPredicted RBP2.34□□□□□ -2.03
VMP1-216ENST00000592790 IGKV2-24A0A0C4DH68 120 aa2.34□□□□□ -2.04
VMP1-216ENST00000592790 INAFM1C9JVW0 142 aa2.34□□□□□ -2.04
VMP1-216ENST00000592790 Q1T7F1 81 aa2.33□□□□□ -2.04
VMP1-216ENST00000592790 Q8N377 158 aa2.33□□□□□ -2.04
VMP1-216ENST00000592790 C1orf64Q8NEQ6 169 aa2.33□□□□□ -2.04
VMP1-216ENST00000592790 PRRC2CQ9Y520 2896 aaKnown RBP2.33□□□□□ -2.04
VMP1-216ENST00000592790 ATRQ13535 2644 aa2.33□□□□□ -2.04
VMP1-216ENST00000592790 C15orf56Q8N910 161 aa2.33□□□□□ -2.04
VMP1-216ENST00000592790 SPTSSBQ8NFR3 76 aa2.33□□□□□ -2.04
VMP1-216ENST00000592790 LINC00476Q8WZB0 136 aa2.33□□□□□ -2.04
VMP1-216ENST00000592790 SPRR4Q96PI1 79 aa2.33□□□□□ -2.04
VMP1-216ENST00000592790 MOBPQ13875 183 aa2.33□□□□□ -2.04
VMP1-216ENST00000592790 TRAV22A0A0B4J277 110 aa2.32□□□□□ -2.04
VMP1-216ENST00000592790 RPL37AP61513 92 aaKnown RBP2.32□□□□□ -2.04
VMP1-216ENST00000592790 A8MWP4 228 aa2.32□□□□□ -2.04
VMP1-216ENST00000592790 C16orf90A8MZG2 172 aa2.32□□□□□ -2.04
VMP1-216ENST00000592790 PSPHP1O15172 72 aa2.32□□□□□ -2.04
VMP1-216ENST00000592790 CYSTM1Q9H1C7 97 aa2.32□□□□□ -2.04
VMP1-216ENST00000592790 COL7A1Q02388 2944 aa2.32□□□□□ -2.04
VMP1-216ENST00000592790 STAB1Q9NY15 2570 aa2.32□□□□□ -2.04
VMP1-216ENST00000592790 PRR4Q16378 134 aa2.32□□□□□ -2.04
VMP1-216ENST00000592790 VPS13BQ7Z7G8 4022 aa2.32□□□□□ -2.04
VMP1-216ENST00000592790 VPS13DQ5THJ4 4388 aa2.32□□□□□ -2.04
VMP1-216ENST00000592790 K7EQZ3 153 aa2.31□□□□□ -2.04
VMP1-216ENST00000592790 KRTAP1-3Q8IUG1 177 aa2.31□□□□□ -2.04
VMP1-216ENST00000592790 M0R2N4 97 aa2.31□□□□□ -2.04
VMP1-216ENST00000592790 PRR26Q8N8Z3 221 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms