RNA–Protein interactions for RNA: ENST00000592604.5

SMARCA4-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best)

Gene SMARCA4, Length 2,940 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-219ENST00000592604 SNURFQ9Y675 71 aa9.8□□□□□ -0.84
SMARCA4-219ENST00000592604 NDUFC1O43677 76 aa9.78□□□□□ -0.84
SMARCA4-219ENST00000592604 F8WEM9 126 aa9.77□□□□□ -0.85
SMARCA4-219ENST00000592604 KPRPQ5T749 579 aaPredicted RBP9.77□□□□□ -0.85
SMARCA4-219ENST00000592604 H3BS24 57 aa9.76□□□□□ -0.85
SMARCA4-219ENST00000592604 Q6ZRP5 223 aa9.76□□□□□ -0.85
SMARCA4-219ENST00000592604 BPY2O14599 106 aa9.75□□□□□ -0.85
SMARCA4-219ENST00000592604 ERC2-IT1O76042 136 aa9.75□□□□□ -0.85
SMARCA4-219ENST00000592604 NREPQ16612 68 aa9.75□□□□□ -0.85
SMARCA4-219ENST00000592604 NOTCH2Q04721 2471 aa9.75□□□□□ -0.85
SMARCA4-219ENST00000592604 FAM229BQ4G0N7 80 aa9.74□□□□□ -0.85
SMARCA4-219ENST00000592604 RBM12B-AS1Q9P1G2 102 aa9.74□□□□□ -0.85
SMARCA4-219ENST00000592604 IGKV4-1P06312 121 aa9.74□□□□□ -0.85
SMARCA4-219ENST00000592604 UNC79Q9P2D8 2635 aa9.74□□□□□ -0.85
SMARCA4-219ENST00000592604 KCNQ1DNQ9H478 68 aa9.73□□□□□ -0.85
SMARCA4-219ENST00000592604 HIVEP1P15822 2718 aa9.73□□□□□ -0.85
SMARCA4-219ENST00000592604 ATP5EP56381 51 aaPredicted RBP9.71□□□□□ -0.85
SMARCA4-219ENST00000592604 TMEM254Q8TBM7 123 aa9.71□□□□□ -0.85
SMARCA4-219ENST00000592604 TENM1Q9UKZ4 2725 aa9.71□□□□□ -0.86
SMARCA4-219ENST00000592604 ESRGQ1W209 222 aa9.71□□□□□ -0.86
SMARCA4-219ENST00000592604 IGLV5-48A0A075B6I7 105 aa9.7□□□□□ -0.86
SMARCA4-219ENST00000592604 SYCNQ0VAF6 134 aa9.7□□□□□ -0.86
SMARCA4-219ENST00000592604 Q8N377 158 aa9.7□□□□□ -0.86
SMARCA4-219ENST00000592604 Q8N9L7 120 aa9.7□□□□□ -0.86
SMARCA4-219ENST00000592604 INAFM1C9JVW0 142 aa9.69□□□□□ -0.86
SMARCA4-219ENST00000592604 OCR1Q9BZK8 76 aa9.69□□□□□ -0.86
SMARCA4-219ENST00000592604 FASNP49327 2511 aaKnown RBP9.69□□□□□ -0.86
SMARCA4-219ENST00000592604 J3QKU1 62 aa9.69□□□□□ -0.86
SMARCA4-219ENST00000592604 LINC01556Q5JQF7 62 aa9.69□□□□□ -0.86
SMARCA4-219ENST00000592604 Q6ZTC4 211 aa9.69□□□□□ -0.86
SMARCA4-219ENST00000592604 C7orf33Q8WU49 177 aa9.68□□□□□ -0.86
SMARCA4-219ENST00000592604 NKAPP1Q8N9T2 125 aa9.68□□□□□ -0.86
SMARCA4-219ENST00000592604 IGKV2D-24A0A075B6R9 120 aa9.67□□□□□ -0.86
SMARCA4-219ENST00000592604 A0A1B0GW54 56 aa9.67□□□□□ -0.86
SMARCA4-219ENST00000592604 SERTAD4-AS1Q5TG53 156 aa9.67□□□□□ -0.86
SMARCA4-219ENST00000592604 TRRAPQ9Y4A5 3859 aa9.66□□□□□ -0.86
SMARCA4-219ENST00000592604 C3orf84H3BNL1 204 aa9.66□□□□□ -0.86
SMARCA4-219ENST00000592604 PLA2G2DQ9UNK4 145 aa9.66□□□□□ -0.86
SMARCA4-219ENST00000592604 DEFB105AQ8NG35 78 aa9.65□□□□□ -0.86
SMARCA4-219ENST00000592604 TLX1NBP0CAT3 122 aa9.65□□□□□ -0.87
SMARCA4-219ENST00000592604 DHRS4-AS1Q9P1J3 65 aa9.65□□□□□ -0.87
SMARCA4-219ENST00000592604 HELZ2Q9BYK8 2649 aaKnown RBP9.64□□□□□ -0.87
SMARCA4-219ENST00000592604 KRTAP4-16G5E9R7 235 aaPredicted RBP9.63□□□□□ -0.87
SMARCA4-219ENST00000592604 ATRQ13535 2644 aa9.62□□□□□ -0.87
SMARCA4-219ENST00000592604 Q6ZRX8 168 aa9.62□□□□□ -0.87
SMARCA4-219ENST00000592604 NSD1Q96L73 2696 aaPredicted RBP9.62□□□□□ -0.87
SMARCA4-219ENST00000592604 TEP1Q99973 2627 aaKnown RBP9.62□□□□□ -0.87
SMARCA4-219ENST00000592604 FUSP35637 526 aaKnown RBP eCLIP9.62□□□□□ -0.87
SMARCA4-219ENST00000592604 TNP2Q05952 138 aa9.62□□□□□ -0.87
SMARCA4-219ENST00000592604 PRYO14603 147 aa9.61□□□□□ -0.87
SMARCA4-219ENST00000592604 IGLV5-37A0A075B6J1 123 aa9.61□□□□□ -0.87
SMARCA4-219ENST00000592604 A0A1W2PNM2 257 aa9.61□□□□□ -0.87
SMARCA4-219ENST00000592604 SPRR1AP35321 89 aa9.61□□□□□ -0.87
SMARCA4-219ENST00000592604 Q9BRP9 147 aa9.61□□□□□ -0.87
SMARCA4-219ENST00000592604 IGLV1-50A0A075B6I6 118 aa9.6□□□□□ -0.87
SMARCA4-219ENST00000592604 DNAH10OSP0CZ25 163 aa9.59□□□□□ -0.87
SMARCA4-219ENST00000592604 OTOGQ6ZRI0 2925 aa9.59□□□□□ -0.87
SMARCA4-219ENST00000592604 PKD1L1Q8TDX9 2849 aa9.58□□□□□ -0.88
SMARCA4-219ENST00000592604 DEFB131BA0A096LNP1 70 aa9.58□□□□□ -0.88
SMARCA4-219ENST00000592604 KRTAP10-11P60412 298 aa9.58□□□□□ -0.88
SMARCA4-219ENST00000592604 C1orf137Q5JT78 98 aa9.58□□□□□ -0.88
SMARCA4-219ENST00000592604 OXLD1Q5BKU9 147 aa9.57□□□□□ -0.88
SMARCA4-219ENST00000592604 Q8NBF4 154 aa9.57□□□□□ -0.88
SMARCA4-219ENST00000592604 RPL37AP8A6NKH3 93 aa9.57□□□□□ -0.88
SMARCA4-219ENST00000592604 SPRR4Q96PI1 79 aa9.56□□□□□ -0.88
SMARCA4-219ENST00000592604 LCE6AA0A183 80 aa9.56□□□□□ -0.88
SMARCA4-219ENST00000592604 ETDCA0A1B0GVM5 59 aa9.56□□□□□ -0.88
SMARCA4-219ENST00000592604 KTN1-AS1Q86SY8 53 aa9.56□□□□□ -0.88
SMARCA4-219ENST00000592604 HIGD2AQ9BW72 106 aa9.55□□□□□ -0.88
SMARCA4-219ENST00000592604 FAM168BA1KXE4 195 aa9.55□□□□□ -0.88
SMARCA4-219ENST00000592604 SMIM29Q86T20 159 aa9.55□□□□□ -0.88
SMARCA4-219ENST00000592604 KRTAP7-1Q8IUC3 87 aa9.55□□□□□ -0.88
SMARCA4-219ENST00000592604 ST20-AS1Q8NBB2 130 aa9.55□□□□□ -0.88
SMARCA4-219ENST00000592604 KMT2BQ9UMN6 2715 aaPredicted RBP9.53□□□□□ -0.88
SMARCA4-219ENST00000592604 DSCR10P59022 87 aa9.52□□□□□ -0.89
SMARCA4-219ENST00000592604 FAM30AQ9NZY2 134 aa9.52□□□□□ -0.89
SMARCA4-219ENST00000592604 C8orf87E5RJ46 101 aa9.51□□□□□ -0.89
SMARCA4-219ENST00000592604 LRCOL1A6NCL2 159 aa9.5□□□□□ -0.89
SMARCA4-219ENST00000592604 PSPHP1O15172 72 aa9.5□□□□□ -0.89
SMARCA4-219ENST00000592604 A8MU10 97 aa9.49□□□□□ -0.89
SMARCA4-219ENST00000592604 CASC10Q5T4H9 136 aa9.49□□□□□ -0.89
SMARCA4-219ENST00000592604 TENM3Q9P273 2699 aa9.49□□□□□ -0.89
SMARCA4-219ENST00000592604 LINC00588Q9Y4M8 146 aa9.47□□□□□ -0.89
SMARCA4-219ENST00000592604 ANK2Q01484 3957 aa9.47□□□□□ -0.89
SMARCA4-219ENST00000592604 ZCCHC13Q8WW36 166 aaKnown RBP9.47□□□□□ -0.89
SMARCA4-219ENST00000592604 UBE2BP63146 152 aa9.46□□□□□ -0.89
SMARCA4-219ENST00000592604 HECTD1Q9ULT8 2610 aa9.46□□□□□ -0.9
SMARCA4-219ENST00000592604 K7EQZ3 153 aa9.46□□□□□ -0.9
SMARCA4-219ENST00000592604 FLNBO75369 2602 aaKnown RBP9.46□□□□□ -0.9
SMARCA4-219ENST00000592604 DNAH1Q9P2D7 4330 aa9.45□□□□□ -0.9
SMARCA4-219ENST00000592604 REG3GQ6UW15 175 aa9.45□□□□□ -0.9
SMARCA4-219ENST00000592604 PRR26Q8N8Z3 221 aa9.43□□□□□ -0.9
SMARCA4-219ENST00000592604 LINC00476Q8WZB0 136 aa9.43□□□□□ -0.9
SMARCA4-219ENST00000592604 hDV103S1A0JD37 113 aa9.42□□□□□ -0.9
SMARCA4-219ENST00000592604 CMYA5Q8N3K9 4069 aa9.41□□□□□ -0.9
SMARCA4-219ENST00000592604 HCG22E2RYF7 251 aa9.41□□□□□ -0.9
SMARCA4-219ENST00000592604 IGFL1Q6UW32 110 aa9.4□□□□□ -0.9
SMARCA4-219ENST00000592604 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.39□□□□□ -0.91
SMARCA4-219ENST00000592604 Q1T7F1 81 aa9.39□□□□□ -0.91
SMARCA4-219ENST00000592604 PSCAO43653 123 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms