RNA–Protein interactions for RNA: ENST00000592158.1

SMARCA4-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 409 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-218ENST00000592158 NDUFA12Q9UI09 145 aa4.71□□□□□ -1.66
SMARCA4-218ENST00000592158 TRBV10-3A0A0K0K1G6 114 aa4.7□□□□□ -1.66
SMARCA4-218ENST00000592158 SPRR1AP35321 89 aa4.7□□□□□ -1.66
SMARCA4-218ENST00000592158 KRTAP10-10P60014 251 aa4.7□□□□□ -1.66
SMARCA4-218ENST00000592158 LINC00483Q53H64 154 aa4.7□□□□□ -1.66
SMARCA4-218ENST00000592158 MIR7-3HGQ8N6C7 128 aa4.7□□□□□ -1.66
SMARCA4-218ENST00000592158 Q8N377 158 aa4.69□□□□□ -1.66
SMARCA4-218ENST00000592158 FAM19A2Q8N3H0 131 aa4.69□□□□□ -1.66
SMARCA4-218ENST00000592158 CHCHD1Q96BP2 118 aaKnown RBP4.69□□□□□ -1.66
SMARCA4-218ENST00000592158 B5MCH6 92 aa4.68□□□□□ -1.66
SMARCA4-218ENST00000592158 ERC2-IT1O76042 136 aa4.68□□□□□ -1.66
SMARCA4-218ENST00000592158 TRGC2P03986 189 aa4.68□□□□□ -1.66
SMARCA4-218ENST00000592158 S100A12P80511 92 aa4.68□□□□□ -1.66
SMARCA4-218ENST00000592158 IFI27L1Q96BM0 104 aa4.68□□□□□ -1.66
SMARCA4-218ENST00000592158 TRAV12-1A0A0B4J245 112 aa4.67□□□□□ -1.66
SMARCA4-218ENST00000592158 DDTP30046 118 aa4.67□□□□□ -1.66
SMARCA4-218ENST00000592158 HERV-K104P63124 156 aa4.67□□□□□ -1.66
SMARCA4-218ENST00000592158 SLC25A20O43772 301 aa4.66□□□□□ -1.66
SMARCA4-218ENST00000592158 RPS29P62273 56 aaKnown RBP4.66□□□□□ -1.66
SMARCA4-218ENST00000592158 C9orf153Q5TBE3 101 aa4.66□□□□□ -1.66
SMARCA4-218ENST00000592158 SSBP3-AS1Q7Z2R9 100 aa4.66□□□□□ -1.66
SMARCA4-218ENST00000592158 Q9BRP9 147 aa4.66□□□□□ -1.66
SMARCA4-218ENST00000592158 MAP1LC3CQ9BXW4 147 aa4.66□□□□□ -1.66
SMARCA4-218ENST00000592158 MYMXA0A1B0GTQ4 84 aa4.65□□□□□ -1.67
SMARCA4-218ENST00000592158 LINC00587B1AMM8 73 aa4.65□□□□□ -1.67
SMARCA4-218ENST00000592158 H0Y8G0 127 aa4.65□□□□□ -1.67
SMARCA4-218ENST00000592158 TSPEAR-AS2P59090 65 aa4.65□□□□□ -1.67
SMARCA4-218ENST00000592158 COA6Q5JTJ3 125 aaKnown RBP4.65□□□□□ -1.67
SMARCA4-218ENST00000592158 Q6Q795 121 aa4.65□□□□□ -1.67
SMARCA4-218ENST00000592158 Q6ZRX8 168 aa4.64□□□□□ -1.67
SMARCA4-218ENST00000592158 TRBV10-2A0A0K0K1G8 114 aa4.63□□□□□ -1.67
SMARCA4-218ENST00000592158 HIST1H2BKO60814 126 aa4.63□□□□□ -1.67
SMARCA4-218ENST00000592158 HIST1H2BJP06899 126 aa4.63□□□□□ -1.67
SMARCA4-218ENST00000592158 HIST1H2BOP23527 126 aa4.63□□□□□ -1.67
SMARCA4-218ENST00000592158 HIST1H2BBP33778 126 aa4.63□□□□□ -1.67
SMARCA4-218ENST00000592158 HIST1H2BDP58876 126 aa4.63□□□□□ -1.67
SMARCA4-218ENST00000592158 LINC00310P59036 64 aa4.63□□□□□ -1.67
SMARCA4-218ENST00000592158 HIST1H2BCP62807 126 aa4.63□□□□□ -1.67
SMARCA4-218ENST00000592158 HIST2H2BEQ16778 126 aa4.63□□□□□ -1.67
SMARCA4-218ENST00000592158 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.63□□□□□ -1.67
SMARCA4-218ENST00000592158 S100A7L2Q5SY68 101 aa4.63□□□□□ -1.67
SMARCA4-218ENST00000592158 HIST1H2BHQ93079 126 aa4.63□□□□□ -1.67
SMARCA4-218ENST00000592158 HIST1H2BNQ99877 126 aa4.63□□□□□ -1.67
SMARCA4-218ENST00000592158 HIST1H2BMQ99879 126 aa4.63□□□□□ -1.67
SMARCA4-218ENST00000592158 MIEN1Q9BRT3 115 aa4.63□□□□□ -1.67
SMARCA4-218ENST00000592158 SPANXB1Q9NS25 103 aaPredicted RBP4.63□□□□□ -1.67
SMARCA4-218ENST00000592158 TRAV23DV6A0A075B6W5 121 aa4.62□□□□□ -1.67
SMARCA4-218ENST00000592158 LEPROTO15243 131 aa4.62□□□□□ -1.67
SMARCA4-218ENST00000592158 LOC107984156A0A0G2JMH3 177 aa4.61□□□□□ -1.67
SMARCA4-218ENST00000592158 HSBP1O75506 76 aa4.61□□□□□ -1.67
SMARCA4-218ENST00000592158 SERF1AO75920 110 aa4.61□□□□□ -1.67
SMARCA4-218ENST00000592158 NPC2P61916 151 aa4.61□□□□□ -1.67
SMARCA4-218ENST00000592158 JOSD1Q15040 202 aaPredicted RBP4.61□□□□□ -1.67
SMARCA4-218ENST00000592158 ARL17AQ8IVW1 177 aa4.61□□□□□ -1.67
SMARCA4-218ENST00000592158 ST20-AS1Q8NBB2 130 aa4.61□□□□□ -1.67
SMARCA4-218ENST00000592158 C9orf92A6NGG3 77 aa4.6□□□□□ -1.67
SMARCA4-218ENST00000592158 J3QQQ9 107 aa4.6□□□□□ -1.67
SMARCA4-218ENST00000592158 IGLV6-57P01721 117 aa4.6□□□□□ -1.67
SMARCA4-218ENST00000592158 SPRR2EP22531 72 aa4.6□□□□□ -1.67
SMARCA4-218ENST00000592158 SPRR2BP35325 72 aa4.6□□□□□ -1.67
SMARCA4-218ENST00000592158 SPRR2AP35326 72 aa4.6□□□□□ -1.67
SMARCA4-218ENST00000592158 HRCT1Q6UXD1 115 aa4.6□□□□□ -1.67
SMARCA4-218ENST00000592158 HSPB8Q9UJY1 196 aa4.6□□□□□ -1.67
SMARCA4-218ENST00000592158 ZNF73O43830 326 aaPredicted RBP4.59□□□□□ -1.67
SMARCA4-218ENST00000592158 NDUFC2O95298 119 aa4.59□□□□□ -1.67
SMARCA4-218ENST00000592158 PLNP26678 52 aa4.59□□□□□ -1.67
SMARCA4-218ENST00000592158 HERVK_113P61574 105 aa4.59□□□□□ -1.67
SMARCA4-218ENST00000592158 LEPROTL1O95214 131 aa4.58□□□□□ -1.68
SMARCA4-218ENST00000592158 NMUP48645 174 aa4.58□□□□□ -1.68
SMARCA4-218ENST00000592158 SOSTDC1Q6X4U4 206 aa4.58□□□□□ -1.68
SMARCA4-218ENST00000592158 PMCHL2Q9BQD1 86 aa4.58□□□□□ -1.68
SMARCA4-218ENST00000592158 LIMD2Q9BT23 127 aa4.58□□□□□ -1.68
SMARCA4-218ENST00000592158 EIF4EBP3O60516 100 aaPredicted RBP4.57□□□□□ -1.68
SMARCA4-218ENST00000592158 DPM2O94777 84 aa4.57□□□□□ -1.68
SMARCA4-218ENST00000592158 IGKCP01834 107 aa4.56□□□□□ -1.68
SMARCA4-218ENST00000592158 FABP4P15090 132 aa4.56□□□□□ -1.68
SMARCA4-218ENST00000592158 HINT1P49773 126 aaPredicted RBP4.56□□□□□ -1.68
SMARCA4-218ENST00000592158 OR13C6PQ8NH95 151 aa4.56□□□□□ -1.68
SMARCA4-218ENST00000592158 A0A0J9YXY3 114 aa4.55□□□□□ -1.68
SMARCA4-218ENST00000592158 C5orf52A6NGY3 159 aa4.55□□□□□ -1.68
SMARCA4-218ENST00000592158 AKR1D1P51857 326 aa4.55□□□□□ -1.68
SMARCA4-218ENST00000592158 ADAMTSL4-AS1Q5T5F5 129 aa4.55□□□□□ -1.68
SMARCA4-218ENST00000592158 SLC25A34Q6PIV7 304 aa4.55□□□□□ -1.68
SMARCA4-218ENST00000592158 PET117Q6UWS5 81 aa4.54□□□□□ -1.68
SMARCA4-218ENST00000592158 DHRS4-AS1Q9P1J3 65 aa4.54□□□□□ -1.68
SMARCA4-218ENST00000592158 LAMTOR3Q9UHA4 124 aa4.54□□□□□ -1.68
SMARCA4-218ENST00000592158 CBY1Q9Y3M2 126 aa4.54□□□□□ -1.68
SMARCA4-218ENST00000592158 SYS1-DBNDD2H3BUS1 97 aa4.53□□□□□ -1.68
SMARCA4-218ENST00000592158 H7C2G1 150 aa4.53□□□□□ -1.68
SMARCA4-218ENST00000592158 SPRR1BP22528 89 aa4.53□□□□□ -1.68
SMARCA4-218ENST00000592158 LINC01545Q5VT33 79 aa4.53□□□□□ -1.68
SMARCA4-218ENST00000592158 E9PLD3 99 aa4.52□□□□□ -1.69
SMARCA4-218ENST00000592158 Q1RN00 199 aa4.52□□□□□ -1.69
SMARCA4-218ENST00000592158 HIST3H2BBQ8N257 126 aa4.52□□□□□ -1.69
SMARCA4-218ENST00000592158 DEFB105AQ8NG35 78 aa4.52□□□□□ -1.69
SMARCA4-218ENST00000592158 SPANXCQ9NY87 97 aa4.52□□□□□ -1.69
SMARCA4-218ENST00000592158 COX7BP24311 80 aa4.51□□□□□ -1.69
SMARCA4-218ENST00000592158 TAL2Q16559 108 aa4.51□□□□□ -1.69
SMARCA4-218ENST00000592158 LINC00308Q8TCZ7 52 aa4.51□□□□□ -1.69
SMARCA4-218ENST00000592158 S100A6P06703 90 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms