RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 SPANXCQ9NY87 97 aa15.82■□□□□ 0.12
SMAD4-213ENST00000591914 TRAV23DV6A0A075B6W5 121 aa15.81■□□□□ 0.12
SMAD4-213ENST00000591914 Q6ZRX8 168 aa15.81■□□□□ 0.12
SMAD4-213ENST00000591914 ANKRD39Q53RE8 183 aa15.79■□□□□ 0.12
SMAD4-213ENST00000591914 Q9BRP9 147 aa15.79■□□□□ 0.12
SMAD4-213ENST00000591914 AKR1D1P51857 326 aa15.78■□□□□ 0.12
SMAD4-213ENST00000591914 CTAG1AP78358 180 aa15.78■□□□□ 0.12
SMAD4-213ENST00000591914 ATOH7Q8N100 152 aa15.78■□□□□ 0.12
SMAD4-213ENST00000591914 ERC2-IT1O76042 136 aa15.77■□□□□ 0.12
SMAD4-213ENST00000591914 LINC00483Q53H64 154 aa15.77■□□□□ 0.12
SMAD4-213ENST00000591914 ZNF73O43830 326 aaPredicted RBP15.76■□□□□ 0.11
SMAD4-213ENST00000591914 HIST3H2BBQ8N257 126 aa15.76■□□□□ 0.11
SMAD4-213ENST00000591914 PPDPFQ9H3Y8 114 aa15.75■□□□□ 0.11
SMAD4-213ENST00000591914 CBY1Q9Y3M2 126 aa15.74■□□□□ 0.11
SMAD4-213ENST00000591914 SCGB1D4Q6XE38 83 aa15.73■□□□□ 0.11
SMAD4-213ENST00000591914 HIST1H2BLQ99880 126 aa15.73■□□□□ 0.11
SMAD4-213ENST00000591914 SPANXDQ9BXN6 97 aa15.73■□□□□ 0.11
SMAD4-213ENST00000591914 JOSD1Q15040 202 aaPredicted RBP15.72■□□□□ 0.11
SMAD4-213ENST00000591914 GAGE2AQ6NT46 116 aa15.71■□□□□ 0.11
SMAD4-213ENST00000591914 OR13C6PQ8NH95 151 aa15.7■□□□□ 0.1
SMAD4-213ENST00000591914 S100A2P29034 98 aa15.69■□□□□ 0.1
SMAD4-213ENST00000591914 SPAG11AQ6PDA7 123 aa15.69■□□□□ 0.1
SMAD4-213ENST00000591914 PCP2Q8IVA1 136 aa15.69■□□□□ 0.1
SMAD4-213ENST00000591914 SNRPEP62304 92 aaKnown RBP15.68■□□□□ 0.1
SMAD4-213ENST00000591914 LINC00518Q8N0U6 118 aa15.68■□□□□ 0.1
SMAD4-213ENST00000591914 RETNLBQ9BQ08 111 aa15.67■□□□□ 0.1
SMAD4-213ENST00000591914 HINT1P49773 126 aaPredicted RBP15.65■□□□□ 0.1
SMAD4-213ENST00000591914 Q8NBF4 154 aa15.65■□□□□ 0.1
SMAD4-213ENST00000591914 IFITM1P13164 125 aa15.64■□□□□ 0.09
SMAD4-213ENST00000591914 Q6ZVH6 145 aa15.64■□□□□ 0.09
SMAD4-213ENST00000591914 COPS9Q8WXC6 57 aa15.64■□□□□ 0.09
SMAD4-213ENST00000591914 S100A6P06703 90 aa15.63■□□□□ 0.09
SMAD4-213ENST00000591914 C4orf48Q5BLP8 95 aa15.61■□□□□ 0.09
SMAD4-213ENST00000591914 C5orf52A6NGY3 159 aa15.6■□□□□ 0.09
SMAD4-213ENST00000591914 IGLV9-49A0A0B4J1Y8 123 aa15.59■□□□□ 0.09
SMAD4-213ENST00000591914 MOBPQ13875 183 aa15.59■□□□□ 0.09
SMAD4-213ENST00000591914 ST20-AS1Q8NBB2 130 aa15.58■□□□□ 0.08
SMAD4-213ENST00000591914 SSBP3-AS1Q7Z2R9 100 aa15.57■□□□□ 0.08
SMAD4-213ENST00000591914 MUSTN1Q8IVN3 82 aa15.57■□□□□ 0.08
SMAD4-213ENST00000591914 C6orf99Q4VX62 202 aa15.56■□□□□ 0.08
SMAD4-213ENST00000591914 DHRS4-AS1Q9P1J3 65 aa15.56■□□□□ 0.08
SMAD4-213ENST00000591914 SPINK1P00995 79 aa15.55■□□□□ 0.08
SMAD4-213ENST00000591914 ELOF1P60002 83 aaKnown RBP15.55■□□□□ 0.08
SMAD4-213ENST00000591914 HSBP1L1C9JCN9 74 aa15.53■□□□□ 0.08
SMAD4-213ENST00000591914 COX7BP24311 80 aa15.53■□□□□ 0.08
SMAD4-213ENST00000591914 IGLV7-46A0A075B6I9 117 aa15.52■□□□□ 0.08
SMAD4-213ENST00000591914 TPRXLQ17RH7 258 aa15.51■□□□□ 0.07
SMAD4-213ENST00000591914 TRBV7-6A0A0J9YX20 115 aa15.5■□□□□ 0.07
SMAD4-213ENST00000591914 A6NDN8 102 aa15.49■□□□□ 0.07
SMAD4-213ENST00000591914 SPRR1BP22528 89 aa15.49■□□□□ 0.07
SMAD4-213ENST00000591914 RPS29P62273 56 aaKnown RBP15.47■□□□□ 0.07
SMAD4-213ENST00000591914 C9orf153Q5TBE3 101 aa15.46■□□□□ 0.07
SMAD4-213ENST00000591914 FP248Q71RG6 208 aaPredicted RBP15.46■□□□□ 0.07
SMAD4-213ENST00000591914 TRAV13-2A0A0B4J235 113 aa15.44■□□□□ 0.06
SMAD4-213ENST00000591914 SCGB1D1O95968 90 aa15.44■□□□□ 0.06
SMAD4-213ENST00000591914 A0A1B0GWB2 263 aa15.43■□□□□ 0.06
SMAD4-213ENST00000591914 SLC25A34Q6PIV7 304 aa15.42■□□□□ 0.06
SMAD4-213ENST00000591914 MUC2Q02817 5179 aa15.42■□□□□ 0.06
SMAD4-213ENST00000591914 CDIP1Q9H305 208 aa15.4■□□□□ 0.06
SMAD4-213ENST00000591914 Q8N377 158 aa15.39■□□□□ 0.05
SMAD4-213ENST00000591914 SMIM11BQ8TCY0 68 aa15.38■□□□□ 0.05
SMAD4-213ENST00000591914 A4D1N5 150 aa15.36■□□□□ 0.05
SMAD4-213ENST00000591914 LAMTOR3Q9UHA4 124 aa15.36■□□□□ 0.05
SMAD4-213ENST00000591914 TAL2Q16559 108 aa15.35■□□□□ 0.05
SMAD4-213ENST00000591914 COX8AP10176 69 aa15.34■□□□□ 0.05
SMAD4-213ENST00000591914 DEFB105AQ8NG35 78 aa15.34■□□□□ 0.05
SMAD4-213ENST00000591914 TEX49A0A1B0GTD5 131 aa15.33■□□□□ 0.04
SMAD4-213ENST00000591914 SLC25A20O43772 301 aa15.33■□□□□ 0.04
SMAD4-213ENST00000591914 IGLV5-48A0A075B6I7 105 aa15.31■□□□□ 0.04
SMAD4-213ENST00000591914 KRTAP13-3Q3SY46 172 aa15.31■□□□□ 0.04
SMAD4-213ENST00000591914 LINC01547P58512 204 aaPredicted RBP15.3■□□□□ 0.04
SMAD4-213ENST00000591914 DLEU1O43261 78 aa15.29■□□□□ 0.04
SMAD4-213ENST00000591914 Q1RN00 199 aa15.29■□□□□ 0.04
SMAD4-213ENST00000591914 NHP2Q9NX24 153 aaKnown RBP15.28■□□□□ 0.04
SMAD4-213ENST00000591914 SMIM29Q86T20 159 aa15.27■□□□□ 0.04
SMAD4-213ENST00000591914 HIST1H4GQ99525 98 aa15.27■□□□□ 0.04
SMAD4-213ENST00000591914 MUC17Q685J3 4493 aa15.25■□□□□ 0.03
SMAD4-213ENST00000591914 VAMP3Q15836 100 aa15.24■□□□□ 0.03
SMAD4-213ENST00000591914 PRO1933Q9H354 126 aa15.22■□□□□ 0.03
SMAD4-213ENST00000591914 HRCT1Q6UXD1 115 aa15.21■□□□□ 0.03
SMAD4-213ENST00000591914 C14orf144Q96I85 54 aa15.21■□□□□ 0.03
SMAD4-213ENST00000591914 PAM16Q9Y3D7 125 aa15.21■□□□□ 0.03
SMAD4-213ENST00000591914 LINC00575Q6W349 94 aa15.2■□□□□ 0.02
SMAD4-213ENST00000591914 C12orf57Q99622 126 aa15.2■□□□□ 0.02
SMAD4-213ENST00000591914 CD164Q04900 197 aa15.19■□□□□ 0.02
SMAD4-213ENST00000591914 SPATA45Q537H7 98 aa15.19■□□□□ 0.02
SMAD4-213ENST00000591914 LIMD2Q9BT23 127 aa15.19■□□□□ 0.02
SMAD4-213ENST00000591914 VAMP8Q9BV40 100 aa15.17■□□□□ 0.02
SMAD4-213ENST00000591914 HIGD1BQ9P298 99 aa15.17■□□□□ 0.02
SMAD4-213ENST00000591914 hADV29S1A0JD25 119 aa15.13■□□□□ 0.01
SMAD4-213ENST00000591914 A0A0U1RQV1 116 aa15.12■□□□□ 0.01
SMAD4-213ENST00000591914 H7C2G1 150 aa15.12■□□□□ 0.01
SMAD4-213ENST00000591914 C2orf91Q6ZV80 131 aa15.12■□□□□ 0.01
SMAD4-213ENST00000591914 Q6ZQY7 126 aa15.11■□□□□ 0.01
SMAD4-213ENST00000591914 CFC1BP0CG36 223 aa15.1■□□□□ 0.01
SMAD4-213ENST00000591914 CFC1P0CG37 223 aa15.1■□□□□ 0.01
SMAD4-213ENST00000591914 BVES-AS1Q5T3Y7 98 aa15.1■□□□□ 0.01
SMAD4-213ENST00000591914 A0A0G2JQZ4 141 aa15.08■□□□□ 0
SMAD4-213ENST00000591914 ASB16-AS1Q495Z4 193 aa15.07■□□□□ 0
SMAD4-213ENST00000591914 Q5XG85 94 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms