RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 AKR1D1P51857 326 aa5.43□□□□□ -1.54
DNMT1-223ENST00000591239 S100A12P80511 92 aa5.43□□□□□ -1.54
DNMT1-223ENST00000591239 TYMSOSQ8TAI1 123 aa5.43□□□□□ -1.54
DNMT1-223ENST00000591239 HIST1H2BLQ99880 126 aa5.43□□□□□ -1.54
DNMT1-223ENST00000591239 HIGD2AQ9BW72 106 aa5.43□□□□□ -1.54
DNMT1-223ENST00000591239 ETDCA0A1B0GVM5 59 aa5.42□□□□□ -1.54
DNMT1-223ENST00000591239 IGLV6-57P01721 117 aa5.42□□□□□ -1.54
DNMT1-223ENST00000591239 S100A6P06703 90 aa5.42□□□□□ -1.54
DNMT1-223ENST00000591239 FAM229BQ4G0N7 80 aa5.42□□□□□ -1.54
DNMT1-223ENST00000591239 KRTAP13-2Q52LG2 175 aa5.42□□□□□ -1.54
DNMT1-223ENST00000591239 S100A7L2Q5SY68 101 aa5.42□□□□□ -1.54
DNMT1-223ENST00000591239 LINC00308Q8TCZ7 52 aa5.42□□□□□ -1.54
DNMT1-223ENST00000591239 LRP2P98164 4655 aa5.41□□□□□ -1.54
DNMT1-223ENST00000591239 B5MCH6 92 aa5.4□□□□□ -1.54
DNMT1-223ENST00000591239 SCGB1D4Q6XE38 83 aa5.4□□□□□ -1.54
DNMT1-223ENST00000591239 SPANXCQ9NY87 97 aa5.4□□□□□ -1.54
DNMT1-223ENST00000591239 TRAV23DV6A0A075B6W5 121 aa5.39□□□□□ -1.55
DNMT1-223ENST00000591239 SNRPEP62304 92 aaKnown RBP5.39□□□□□ -1.55
DNMT1-223ENST00000591239 PCP2Q8IVA1 136 aa5.39□□□□□ -1.55
DNMT1-223ENST00000591239 SMCR5Q8TEV8 140 aa5.39□□□□□ -1.55
DNMT1-223ENST00000591239 SPRR4Q96PI1 79 aa5.39□□□□□ -1.55
DNMT1-223ENST00000591239 SPANXDQ9BXN6 97 aa5.39□□□□□ -1.55
DNMT1-223ENST00000591239 ZNF706Q9Y5V0 76 aaPredicted RBP5.39□□□□□ -1.55
DNMT1-223ENST00000591239 TSPAN13O95857 204 aa5.38□□□□□ -1.55
DNMT1-223ENST00000591239 Q6ZRX8 168 aa5.38□□□□□ -1.55
DNMT1-223ENST00000591239 UBR4Q5T4S7 5183 aa5.38□□□□□ -1.55
DNMT1-223ENST00000591239 ZNF73O43830 326 aaPredicted RBP5.37□□□□□ -1.55
DNMT1-223ENST00000591239 C3orf22Q8N5N4 141 aa5.37□□□□□ -1.55
DNMT1-223ENST00000591239 OR13C6PQ8NH95 151 aa5.37□□□□□ -1.55
DNMT1-223ENST00000591239 Q9BRP9 147 aa5.37□□□□□ -1.55
DNMT1-223ENST00000591239 CBY1Q9Y3M2 126 aa5.37□□□□□ -1.55
DNMT1-223ENST00000591239 C5orf52A6NGY3 159 aa5.36□□□□□ -1.55
DNMT1-223ENST00000591239 ERC2-IT1O76042 136 aa5.36□□□□□ -1.55
DNMT1-223ENST00000591239 IFITM1P13164 125 aa5.36□□□□□ -1.55
DNMT1-223ENST00000591239 JOSD1Q15040 202 aaPredicted RBP5.36□□□□□ -1.55
DNMT1-223ENST00000591239 Q6ZVH6 145 aa5.36□□□□□ -1.55
DNMT1-223ENST00000591239 LINC00518Q8N0U6 118 aa5.36□□□□□ -1.55
DNMT1-223ENST00000591239 LINC00304Q8N9R0 145 aa5.36□□□□□ -1.55
DNMT1-223ENST00000591239 COPS9Q8WXC6 57 aa5.36□□□□□ -1.55
DNMT1-223ENST00000591239 HSBP1L1C9JCN9 74 aa5.35□□□□□ -1.55
DNMT1-223ENST00000591239 HINT1P49773 126 aaPredicted RBP5.35□□□□□ -1.55
DNMT1-223ENST00000591239 PPDPFQ9H3Y8 114 aa5.35□□□□□ -1.55
DNMT1-223ENST00000591239 SCGB1D1O95968 90 aa5.34□□□□□ -1.55
DNMT1-223ENST00000591239 PRR4Q16378 134 aa5.34□□□□□ -1.55
DNMT1-223ENST00000591239 LINC00483Q53H64 154 aa5.34□□□□□ -1.55
DNMT1-223ENST00000591239 GAGE2AQ6NT46 116 aa5.34□□□□□ -1.55
DNMT1-223ENST00000591239 MUSTN1Q8IVN3 82 aa5.34□□□□□ -1.55
DNMT1-223ENST00000591239 LPAP08519 4548 aa5.34□□□□□ -1.56
DNMT1-223ENST00000591239 C9orf118A6NHY6 69 aa5.32□□□□□ -1.56
DNMT1-223ENST00000591239 CTAG1AP78358 180 aa5.32□□□□□ -1.56
DNMT1-223ENST00000591239 A6NDN8 102 aa5.31□□□□□ -1.56
DNMT1-223ENST00000591239 C6orf99Q4VX62 202 aa5.31□□□□□ -1.56
DNMT1-223ENST00000591239 IGLV9-49A0A0B4J1Y8 123 aa5.3□□□□□ -1.56
DNMT1-223ENST00000591239 COX7BP24311 80 aa5.3□□□□□ -1.56
DNMT1-223ENST00000591239 ELOF1P60002 83 aaKnown RBP5.3□□□□□ -1.56
DNMT1-223ENST00000591239 SPAG11AQ6PDA7 123 aa5.3□□□□□ -1.56
DNMT1-223ENST00000591239 ST20-AS1Q8NBB2 130 aa5.3□□□□□ -1.56
DNMT1-223ENST00000591239 Q8NBF4 154 aa5.3□□□□□ -1.56
DNMT1-223ENST00000591239 DHRS4-AS1Q9P1J3 65 aa5.3□□□□□ -1.56
DNMT1-223ENST00000591239 TRAV13-2A0A0B4J235 113 aa5.29□□□□□ -1.56
DNMT1-223ENST00000591239 TRBV7-6A0A0J9YX20 115 aa5.29□□□□□ -1.56
DNMT1-223ENST00000591239 MOBPQ13875 183 aa5.29□□□□□ -1.56
DNMT1-223ENST00000591239 RETNLBQ9BQ08 111 aa5.29□□□□□ -1.56
DNMT1-223ENST00000591239 COX8AP10176 69 aa5.28□□□□□ -1.56
DNMT1-223ENST00000591239 SSBP3-AS1Q7Z2R9 100 aa5.28□□□□□ -1.56
DNMT1-223ENST00000591239 A0A1B0GWB2 263 aa5.27□□□□□ -1.57
DNMT1-223ENST00000591239 RNF213Q63HN8 5207 aa5.26□□□□□ -1.57
DNMT1-223ENST00000591239 A4D1N5 150 aa5.26□□□□□ -1.57
DNMT1-223ENST00000591239 DLEU1O43261 78 aa5.26□□□□□ -1.57
DNMT1-223ENST00000591239 SPINK1P00995 79 aa5.26□□□□□ -1.57
DNMT1-223ENST00000591239 SMIM11BQ8TCY0 68 aa5.26□□□□□ -1.57
DNMT1-223ENST00000591239 HIST1H4GQ99525 98 aa5.26□□□□□ -1.57
DNMT1-223ENST00000591239 PAM16Q9Y3D7 125 aa5.26□□□□□ -1.57
DNMT1-223ENST00000591239 SPRR1BP22528 89 aa5.25□□□□□ -1.57
DNMT1-223ENST00000591239 SPATA45Q537H7 98 aa5.25□□□□□ -1.57
DNMT1-223ENST00000591239 C9orf153Q5TBE3 101 aa5.25□□□□□ -1.57
DNMT1-223ENST00000591239 SLC25A34Q6PIV7 304 aa5.25□□□□□ -1.57
DNMT1-223ENST00000591239 C14orf144Q96I85 54 aa5.25□□□□□ -1.57
DNMT1-223ENST00000591239 TAL2Q16559 108 aa5.24□□□□□ -1.57
DNMT1-223ENST00000591239 DEFB105AQ8NG35 78 aa5.24□□□□□ -1.57
DNMT1-223ENST00000591239 VAMP8Q9BV40 100 aa5.24□□□□□ -1.57
DNMT1-223ENST00000591239 IGLV7-46A0A075B6I9 117 aa5.23□□□□□ -1.57
DNMT1-223ENST00000591239 LAMTOR3Q9UHA4 124 aa5.23□□□□□ -1.57
DNMT1-223ENST00000591239 TEX49A0A1B0GTD5 131 aa5.22□□□□□ -1.57
DNMT1-223ENST00000591239 RPS29P62273 56 aaKnown RBP5.22□□□□□ -1.57
DNMT1-223ENST00000591239 VAMP3Q15836 100 aa5.22□□□□□ -1.57
DNMT1-223ENST00000591239 C12orf57Q99622 126 aa5.22□□□□□ -1.57
DNMT1-223ENST00000591239 NHP2Q9NX24 153 aaKnown RBP5.22□□□□□ -1.57
DNMT1-223ENST00000591239 HIGD1BQ9P298 99 aa5.22□□□□□ -1.57
DNMT1-223ENST00000591239 LINC01547P58512 204 aaPredicted RBP5.21□□□□□ -1.58
DNMT1-223ENST00000591239 TPRXLQ17RH7 258 aa5.21□□□□□ -1.58
DNMT1-223ENST00000591239 Q1RN00 199 aa5.21□□□□□ -1.58
DNMT1-223ENST00000591239 FP248Q71RG6 208 aaPredicted RBP5.21□□□□□ -1.58
DNMT1-223ENST00000591239 Q8N377 158 aa5.21□□□□□ -1.58
DNMT1-223ENST00000591239 IGLV5-48A0A075B6I7 105 aa5.2□□□□□ -1.58
DNMT1-223ENST00000591239 SLC25A20O43772 301 aa5.2□□□□□ -1.58
DNMT1-223ENST00000591239 LINC00575Q6W349 94 aa5.2□□□□□ -1.58
DNMT1-223ENST00000591239 C2orf91Q6ZV80 131 aa5.2□□□□□ -1.58
DNMT1-223ENST00000591239 CFC1BP0CG36 223 aa5.19□□□□□ -1.58
DNMT1-223ENST00000591239 CFC1P0CG37 223 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms