RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 H3BQ85 93 aa9.72□□□□□ -0.85
RETREG3-208ENST00000589797 WFDC13Q8IUB5 93 aa9.72□□□□□ -0.85
RETREG3-208ENST00000589797 DHRS4-AS1Q9P1J3 65 aa9.72□□□□□ -0.85
RETREG3-208ENST00000589797 C1orf137Q5JT78 98 aa9.72□□□□□ -0.85
RETREG3-208ENST00000589797 MUC7Q8TAX7 377 aa9.72□□□□□ -0.85
RETREG3-208ENST00000589797 UQCRQO14949 82 aa9.71□□□□□ -0.85
RETREG3-208ENST00000589797 SPINK6Q6UWN8 80 aa9.71□□□□□ -0.85
RETREG3-208ENST00000589797 PRR34Q9NV39 138 aa9.71□□□□□ -0.85
RETREG3-208ENST00000589797 REG3GQ6UW15 175 aa9.71□□□□□ -0.86
RETREG3-208ENST00000589797 FAM19A3Q7Z5A8 133 aa9.71□□□□□ -0.86
RETREG3-208ENST00000589797 TENM3Q9P273 2699 aa9.71□□□□□ -0.86
RETREG3-208ENST00000589797 VPS13CQ709C8 3753 aa9.7□□□□□ -0.86
RETREG3-208ENST00000589797 H3BNG1 76 aa9.69□□□□□ -0.86
RETREG3-208ENST00000589797 SERTAD4-AS1Q5TG53 156 aa9.69□□□□□ -0.86
RETREG3-208ENST00000589797 ST20-AS1Q8NBB2 130 aa9.69□□□□□ -0.86
RETREG3-208ENST00000589797 IMUPQ9GZP8 106 aa9.69□□□□□ -0.86
RETREG3-208ENST00000589797 Q6ZVQ6 151 aa9.68□□□□□ -0.86
RETREG3-208ENST00000589797 NUPR2A6NF83 97 aa9.67□□□□□ -0.86
RETREG3-208ENST00000589797 PRR4Q16378 134 aa9.67□□□□□ -0.86
RETREG3-208ENST00000589797 Q6JHZ5 121 aa9.67□□□□□ -0.86
RETREG3-208ENST00000589797 C15orf56Q8N910 161 aa9.67□□□□□ -0.86
RETREG3-208ENST00000589797 SMCR5Q8TEV8 140 aa9.67□□□□□ -0.86
RETREG3-208ENST00000589797 VPREB1P12018 145 aa9.67□□□□□ -0.86
RETREG3-208ENST00000589797 NDUFB1O75438 58 aa9.66□□□□□ -0.86
RETREG3-208ENST00000589797 SERP2Q8N6R1 65 aa9.65□□□□□ -0.86
RETREG3-208ENST00000589797 DNAH10OSP0CZ25 163 aa9.65□□□□□ -0.86
RETREG3-208ENST00000589797 A0A087WSZ3 146 aa9.64□□□□□ -0.87
RETREG3-208ENST00000589797 PHF5AQ7RTV0 110 aaKnown RBP9.64□□□□□ -0.87
RETREG3-208ENST00000589797 COX7CP15954 63 aa9.64□□□□□ -0.87
RETREG3-208ENST00000589797 A0A0G2JQZ4 141 aa9.63□□□□□ -0.87
RETREG3-208ENST00000589797 A0A1W2PNN7 141 aa9.63□□□□□ -0.87
RETREG3-208ENST00000589797 Q6Q795 121 aa9.63□□□□□ -0.87
RETREG3-208ENST00000589797 FAM30AQ9NZY2 134 aa9.63□□□□□ -0.87
RETREG3-208ENST00000589797 ATP5EP2Q5VTU8 51 aa9.63□□□□□ -0.87
RETREG3-208ENST00000589797 LINC01547P58512 204 aaPredicted RBP9.62□□□□□ -0.87
RETREG3-208ENST00000589797 PKD1L1Q8TDX9 2849 aa9.62□□□□□ -0.87
RETREG3-208ENST00000589797 IGLV6-57P01721 117 aa9.61□□□□□ -0.87
RETREG3-208ENST00000589797 PKIGQ9Y2B9 76 aa9.61□□□□□ -0.87
RETREG3-208ENST00000589797 Q9BRP9 147 aa9.61□□□□□ -0.87
RETREG3-208ENST00000589797 ELOF1P60002 83 aaKnown RBP9.6□□□□□ -0.87
RETREG3-208ENST00000589797 GVQW2A0A096LPI5 108 aaPredicted RBP9.6□□□□□ -0.87
RETREG3-208ENST00000589797 Q8NDZ9 215 aa9.6□□□□□ -0.87
RETREG3-208ENST00000589797 IGLV5-52A0A0A0MRZ9 124 aa9.59□□□□□ -0.87
RETREG3-208ENST00000589797 J3KT08 172 aa9.59□□□□□ -0.87
RETREG3-208ENST00000589797 MP68P56378 58 aa9.57□□□□□ -0.88
RETREG3-208ENST00000589797 TRBV7-7A0A0K0K1E9 115 aa9.56□□□□□ -0.88
RETREG3-208ENST00000589797 PRYO14603 147 aa9.56□□□□□ -0.88
RETREG3-208ENST00000589797 Q6ZQT0 140 aa9.56□□□□□ -0.88
RETREG3-208ENST00000589797 NBDYA0A0U1RRE5 68 aa9.55□□□□□ -0.88
RETREG3-208ENST00000589797 C1orf134Q5TEV5 83 aa9.55□□□□□ -0.88
RETREG3-208ENST00000589797 TM2D3Q9BRN9 247 aa9.55□□□□□ -0.88
RETREG3-208ENST00000589797 Q6ZRX8 168 aa9.54□□□□□ -0.88
RETREG3-208ENST00000589797 LINC00474Q9P2X8 69 aa9.53□□□□□ -0.88
RETREG3-208ENST00000589797 CIRBP-AS1Q8TBR5 109 aa9.53□□□□□ -0.88
RETREG3-208ENST00000589797 C4orf48Q5BLP8 95 aa9.53□□□□□ -0.88
RETREG3-208ENST00000589797 IGKV4-1P06312 121 aa9.52□□□□□ -0.89
RETREG3-208ENST00000589797 NHLRC4P0CG21 123 aaPredicted RBP9.5□□□□□ -0.89
RETREG3-208ENST00000589797 MPLKIPQ8TAP9 179 aa9.5□□□□□ -0.89
RETREG3-208ENST00000589797 LINC00528Q8N1L1 170 aa9.5□□□□□ -0.89
RETREG3-208ENST00000589797 TENM2Q9NT68 2774 aa9.5□□□□□ -0.89
RETREG3-208ENST00000589797 F8WDY8 70 aa9.49□□□□□ -0.89
RETREG3-208ENST00000589797 FAM236DA0A1B0GTK5 79 aa9.49□□□□□ -0.89
RETREG3-208ENST00000589797 EPM2AB3EWF7 344 aa9.49□□□□□ -0.89
RETREG3-208ENST00000589797 FAM236CP0DP71 79 aa9.49□□□□□ -0.89
RETREG3-208ENST00000589797 A0A0U1RQV1 116 aa9.48□□□□□ -0.89
RETREG3-208ENST00000589797 ERC2-IT1O76042 136 aa9.48□□□□□ -0.89
RETREG3-208ENST00000589797 C16orf90A8MZG2 172 aa9.47□□□□□ -0.89
RETREG3-208ENST00000589797 LINC00476Q8WZB0 136 aa9.46□□□□□ -0.89
RETREG3-208ENST00000589797 IGLV1-50A0A075B6I6 118 aa9.46□□□□□ -0.89
RETREG3-208ENST00000589797 WIPF1O43516 503 aa9.46□□□□□ -0.9
RETREG3-208ENST00000589797 Q8N377 158 aa9.45□□□□□ -0.9
RETREG3-208ENST00000589797 TRAV7A0A075B6U4 112 aa9.45□□□□□ -0.9
RETREG3-208ENST00000589797 KCNQ1DNQ9H478 68 aa9.45□□□□□ -0.9
RETREG3-208ENST00000589797 RPL37AP61513 92 aaKnown RBP9.44□□□□□ -0.9
RETREG3-208ENST00000589797 BRK1Q8WUW1 75 aa9.44□□□□□ -0.9
RETREG3-208ENST00000589797 LINC00208Q96KT6 92 aa9.44□□□□□ -0.9
RETREG3-208ENST00000589797 IGHV6-1A0A0B4J1U7 121 aa9.43□□□□□ -0.9
RETREG3-208ENST00000589797 ANAPC11Q9NYG5 84 aa9.43□□□□□ -0.9
RETREG3-208ENST00000589797 TRRAPQ9Y4A5 3859 aa9.42□□□□□ -0.9
RETREG3-208ENST00000589797 RTL8CO15255 209 aa9.42□□□□□ -0.9
RETREG3-208ENST00000589797 C5orf47Q569G3 176 aa9.42□□□□□ -0.9
RETREG3-208ENST00000589797 SMIM29Q86T20 159 aa9.42□□□□□ -0.9
RETREG3-208ENST00000589797 MOBPQ13875 183 aa9.41□□□□□ -0.9
RETREG3-208ENST00000589797 RETNLBQ9BQ08 111 aa9.41□□□□□ -0.9
RETREG3-208ENST00000589797 TRBV7-6A0A0J9YX20 115 aa9.4□□□□□ -0.9
RETREG3-208ENST00000589797 LOC110117498A0A087WWA1 95 aa9.4□□□□□ -0.91
RETREG3-208ENST00000589797 SVIPQ8NHG7 77 aa9.4□□□□□ -0.91
RETREG3-208ENST00000589797 Q8NBF4 154 aa9.39□□□□□ -0.91
RETREG3-208ENST00000589797 TMEM258P61165 79 aa9.39□□□□□ -0.91
RETREG3-208ENST00000589797 APLNQ9ULZ1 77 aa9.39□□□□□ -0.91
RETREG3-208ENST00000589797 TMEM254Q8TBM7 123 aa9.38□□□□□ -0.91
RETREG3-208ENST00000589797 CXCL6P80162 114 aa9.37□□□□□ -0.91
RETREG3-208ENST00000589797 KRTAP1-5Q9BYS1 174 aa9.37□□□□□ -0.91
RETREG3-208ENST00000589797 ZNF706Q9Y5V0 76 aaPredicted RBP9.37□□□□□ -0.91
RETREG3-208ENST00000589797 CASC2Q6XLA1 102 aa9.36□□□□□ -0.91
RETREG3-208ENST00000589797 PCOTHQ58A44 107 aa9.35□□□□□ -0.91
RETREG3-208ENST00000589797 C9orf163Q8N9P6 203 aa9.34□□□□□ -0.91
RETREG3-208ENST00000589797 ZNF469Q96JG9 3925 aaPredicted RBP9.32□□□□□ -0.92
RETREG3-208ENST00000589797 TRBV7-4A0A0J9YYF1 115 aa9.32□□□□□ -0.92
RETREG3-208ENST00000589797 TGP01266 2768 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms