RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 HMGN4O00479 90 aa-0.19□□□□□ -2.44
SMAD4-207ENST00000589076 MYOZ3Q8TDC0 251 aa-0.19□□□□□ -2.44
SMAD4-207ENST00000589076 LINC01558Q9Y6Z2 57 aa-0.19□□□□□ -2.44
SMAD4-207ENST00000589076 MYOM2P54296 1465 aa-0.19□□□□□ -2.44
SMAD4-207ENST00000589076 KIF14Q15058 1648 aa-0.2□□□□□ -2.44
SMAD4-207ENST00000589076 SPRR1AP35321 89 aa-0.2□□□□□ -2.44
SMAD4-207ENST00000589076 RPL13AP3Q6NVV1 102 aa-0.2□□□□□ -2.44
SMAD4-207ENST00000589076 MRPL54Q6P161 138 aaKnown RBP-0.2□□□□□ -2.44
SMAD4-207ENST00000589076 NHSQ6T4R5 1651 aa-0.21□□□□□ -2.44
SMAD4-207ENST00000589076 TRBV6-1A0A0K0K1D8 114 aa-0.21□□□□□ -2.44
SMAD4-207ENST00000589076 EFCAB10A6NFE3 127 aa-0.21□□□□□ -2.44
SMAD4-207ENST00000589076 TNFP01375 233 aa-0.21□□□□□ -2.44
SMAD4-207ENST00000589076 PIGYQ3MUY2 71 aa-0.21□□□□□ -2.44
SMAD4-207ENST00000589076 SAMD9Q5K651 1589 aa-0.21□□□□□ -2.44
SMAD4-207ENST00000589076 LRRC9Q6ZRR7 1453 aa-0.22□□□□□ -2.44
SMAD4-207ENST00000589076 UBR3Q6ZT12 1888 aa-0.22□□□□□ -2.44
SMAD4-207ENST00000589076 GOLGA4Q13439 2230 aaKnown RBP-0.22□□□□□ -2.44
SMAD4-207ENST00000589076 OOSP1A8MZH6 123 aa-0.22□□□□□ -2.44
SMAD4-207ENST00000589076 SFT2D2O95562 160 aa-0.22□□□□□ -2.44
SMAD4-207ENST00000589076 ATP5EP56381 51 aaPredicted RBP-0.22□□□□□ -2.44
SMAD4-207ENST00000589076 KRTAP6-1Q3LI64 71 aa-0.22□□□□□ -2.44
SMAD4-207ENST00000589076 C9orf153Q5TBE3 101 aa-0.22□□□□□ -2.44
SMAD4-207ENST00000589076 SCN7AQ01118 1682 aa-0.22□□□□□ -2.44
SMAD4-207ENST00000589076 PRDM15P57071 1507 aaPredicted RBP-0.23□□□□□ -2.45
SMAD4-207ENST00000589076 UGGT2Q9NYU1 1516 aa-0.23□□□□□ -2.45
SMAD4-207ENST00000589076 LTN1O94822 1766 aa-0.23□□□□□ -2.45
SMAD4-207ENST00000589076 UBE2L5PA0A1B0GUS4 154 aa-0.23□□□□□ -2.45
SMAD4-207ENST00000589076 UBE2L3P68036 154 aaKnown RBP-0.23□□□□□ -2.45
SMAD4-207ENST00000589076 DIP2CQ9Y2E4 1556 aa-0.23□□□□□ -2.45
SMAD4-207ENST00000589076 DOT1LQ8TEK3 1739 aa-0.24□□□□□ -2.45
SMAD4-207ENST00000589076 MGPP08493 103 aa-0.24□□□□□ -2.45
SMAD4-207ENST00000589076 LINC00474Q9P2X8 69 aa-0.24□□□□□ -2.45
SMAD4-207ENST00000589076 UQCR10Q9UDW1 63 aa-0.24□□□□□ -2.45
SMAD4-207ENST00000589076 MAGI1Q96QZ7 1491 aaPredicted RBP-0.24□□□□□ -2.45
SMAD4-207ENST00000589076 ITSN2Q9NZM3 1697 aa-0.24□□□□□ -2.45
SMAD4-207ENST00000589076 UBR1Q8IWV7 1749 aa-0.24□□□□□ -2.45
SMAD4-207ENST00000589076 FAIMQ9NVQ4 179 aa-0.25□□□□□ -2.45
SMAD4-207ENST00000589076 LRRC37AA6NMS7 1700 aa-0.26□□□□□ -2.45
SMAD4-207ENST00000589076 CHKB-CPT1BH3BT56 60 aa-0.26□□□□□ -2.45
SMAD4-207ENST00000589076 DLEU1O43261 78 aa-0.26□□□□□ -2.45
SMAD4-207ENST00000589076 SNAPC5O75971 98 aa-0.26□□□□□ -2.45
SMAD4-207ENST00000589076 NXT2Q9NPJ8 142 aaKnown RBP-0.26□□□□□ -2.45
SMAD4-207ENST00000589076 CDC42SE2Q9NRR3 84 aa-0.26□□□□□ -2.45
SMAD4-207ENST00000589076 C5P01031 1676 aa-0.27□□□□□ -2.45
SMAD4-207ENST00000589076 NSD3Q9BZ95 1437 aa-0.27□□□□□ -2.45
SMAD4-207ENST00000589076 NCOA3Q9Y6Q9 1424 aa-0.27□□□□□ -2.45
SMAD4-207ENST00000589076 FAM24AA6NFZ4 105 aa-0.27□□□□□ -2.45
SMAD4-207ENST00000589076 MT1HP80294 61 aa-0.27□□□□□ -2.45
SMAD4-207ENST00000589076 SARNPP82979 210 aaKnown RBP-0.27□□□□□ -2.45
SMAD4-207ENST00000589076 WHAMMP3Q1A5X7 153 aa-0.27□□□□□ -2.45
SMAD4-207ENST00000589076 FAM167A-AS1Q96KT0 104 aa-0.27□□□□□ -2.45
SMAD4-207ENST00000589076 ABCA8O94911 1581 aa-0.28□□□□□ -2.45
SMAD4-207ENST00000589076 POLA1P09884 1462 aaPredicted RBP-0.28□□□□□ -2.45
SMAD4-207ENST00000589076 COX6B1P14854 86 aa-0.28□□□□□ -2.45
SMAD4-207ENST00000589076 GNG4P50150 75 aa-0.28□□□□□ -2.45
SMAD4-207ENST00000589076 TMEM263Q8WUH6 116 aaKnown RBP-0.28□□□□□ -2.45
SMAD4-207ENST00000589076 DPH3P1Q9H4G8 78 aa-0.28□□□□□ -2.45
SMAD4-207ENST00000589076 IER3IP1Q9Y5U9 82 aa-0.28□□□□□ -2.45
SMAD4-207ENST00000589076 MAGI3Q5TCQ9 1506 aa-0.28□□□□□ -2.45
SMAD4-207ENST00000589076 SCAPERQ9BY12 1400 aa-0.29□□□□□ -2.46
SMAD4-207ENST00000589076 A0A1B0GV90 55 aa-0.29□□□□□ -2.46
SMAD4-207ENST00000589076 PRM1P04553 51 aa-0.29□□□□□ -2.46
SMAD4-207ENST00000589076 IGLC1P0CG04 106 aa-0.29□□□□□ -2.46
SMAD4-207ENST00000589076 GNG11P61952 73 aa-0.29□□□□□ -2.46
SMAD4-207ENST00000589076 SPRR4Q96PI1 79 aa-0.29□□□□□ -2.46
SMAD4-207ENST00000589076 GLI2P10070 1586 aa-0.29□□□□□ -2.46
SMAD4-207ENST00000589076 NEXMIFQ5QGS0 1516 aa-0.29□□□□□ -2.46
SMAD4-207ENST00000589076 TIAM1Q13009 1591 aa-0.3□□□□□ -2.46
SMAD4-207ENST00000589076 F6UZH7 168 aa-0.3□□□□□ -2.46
SMAD4-207ENST00000589076 FAM223AQ8IWN6 122 aa-0.3□□□□□ -2.46
SMAD4-207ENST00000589076 XRN1Q8IZH2 1706 aaKnown RBP-0.3□□□□□ -2.46
SMAD4-207ENST00000589076 PDCD11Q14690 1871 aaKnown RBP-0.31□□□□□ -2.46
SMAD4-207ENST00000589076 ARHGAP5Q13017 1502 aa-0.31□□□□□ -2.46
SMAD4-207ENST00000589076 DUOX2Q9NRD8 1548 aa-0.31□□□□□ -2.46
SMAD4-207ENST00000589076 PPP3R1P63098 170 aa-0.31□□□□□ -2.46
SMAD4-207ENST00000589076 C10orf113Q5VZT2 155 aa-0.31□□□□□ -2.46
SMAD4-207ENST00000589076 SVBPQ8N300 66 aa-0.31□□□□□ -2.46
SMAD4-207ENST00000589076 ARL2-SNX15V9GYD0 113 aa-0.31□□□□□ -2.46
SMAD4-207ENST00000589076 IQGAP1P46940 1657 aa-0.32□□□□□ -2.46
SMAD4-207ENST00000589076 K7EQZ3 153 aa-0.32□□□□□ -2.46
SMAD4-207ENST00000589076 COX6CP09669 75 aa-0.32□□□□□ -2.46
SMAD4-207ENST00000589076 UBE2D3P61077 147 aa-0.32□□□□□ -2.46
SMAD4-207ENST00000589076 UBE2D2P62837 147 aa-0.32□□□□□ -2.46
SMAD4-207ENST00000589076 UBA52P62987 128 aaKnown RBP-0.32□□□□□ -2.46
SMAD4-207ENST00000589076 Q0VG73 95 aa-0.32□□□□□ -2.46
SMAD4-207ENST00000589076 ZFYVE16Q7Z3T8 1539 aa-0.33□□□□□ -2.46
SMAD4-207ENST00000589076 PZPP20742 1482 aa-0.33□□□□□ -2.46
SMAD4-207ENST00000589076 TRBV7-4A0A0J9YYF1 115 aa-0.33□□□□□ -2.46
SMAD4-207ENST00000589076 NAP1L6A6NFF2 107 aa-0.33□□□□□ -2.46
SMAD4-207ENST00000589076 CORTO00230 105 aa-0.33□□□□□ -2.46
SMAD4-207ENST00000589076 SPRR1BP22528 89 aa-0.33□□□□□ -2.46
SMAD4-207ENST00000589076 MANBALQ9NQG1 85 aa-0.33□□□□□ -2.46
SMAD4-207ENST00000589076 RGPD3A6NKT7 1758 aaPredicted RBP-0.33□□□□□ -2.46
SMAD4-207ENST00000589076 RGPD4Q7Z3J3 1758 aa-0.33□□□□□ -2.46
SMAD4-207ENST00000589076 NFAT5O94916 1531 aa-0.33□□□□□ -2.46
SMAD4-207ENST00000589076 LOC730098B7Z3J9 87 aa-0.34□□□□□ -2.46
SMAD4-207ENST00000589076 TMEM203Q969S6 136 aa-0.34□□□□□ -2.46
SMAD4-207ENST00000589076 FXYD6Q9H0Q3 95 aa-0.34□□□□□ -2.46
SMAD4-207ENST00000589076 PRO1854Q9UHT4 67 aa-0.34□□□□□ -2.46
SMAD4-207ENST00000589076 TOGARAM1Q9Y4F4 1720 aa-0.34□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms