RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 BAALC-AS2P0C853 105 aa5.7□□□□□ -1.5
SMAD4-206ENST00000588860 TLX1NBP0CAT3 122 aa5.7□□□□□ -1.5
SMAD4-206ENST00000588860 C6orf99Q4VX62 202 aa5.7□□□□□ -1.5
SMAD4-206ENST00000588860 C9orf129Q5T035 196 aaKnown RBP5.7□□□□□ -1.5
SMAD4-206ENST00000588860 LOC107984640A0A0U1RRK4 108 aa5.69□□□□□ -1.5
SMAD4-206ENST00000588860 GAGE2BQ13066 116 aa5.69□□□□□ -1.5
SMAD4-206ENST00000588860 TEX49A0A1B0GTD5 131 aa5.68□□□□□ -1.5
SMAD4-206ENST00000588860 C14orf177Q52M58 125 aa5.68□□□□□ -1.5
SMAD4-206ENST00000588860 NKAPP1Q8N9T2 125 aa5.68□□□□□ -1.5
SMAD4-206ENST00000588860 DIRC1Q969H9 104 aa5.68□□□□□ -1.5
SMAD4-206ENST00000588860 A0A1B0GX51 115 aa5.67□□□□□ -1.5
SMAD4-206ENST00000588860 SERTAD4-AS1Q5TG53 156 aa5.67□□□□□ -1.5
SMAD4-206ENST00000588860 M0R2N4 97 aa5.66□□□□□ -1.5
SMAD4-206ENST00000588860 SNCGO76070 127 aa5.66□□□□□ -1.5
SMAD4-206ENST00000588860 CNBPP62633 177 aaKnown RBP5.66□□□□□ -1.5
SMAD4-206ENST00000588860 Q8N814 137 aa5.66□□□□□ -1.5
SMAD4-206ENST00000588860 LINC00167Q96N53 147 aa5.66□□□□□ -1.5
SMAD4-206ENST00000588860 ORMDL1Q9P0S3 153 aa5.66□□□□□ -1.5
SMAD4-206ENST00000588860 PLA2G2DQ9UNK4 145 aa5.66□□□□□ -1.5
SMAD4-206ENST00000588860 CBY1Q9Y3M2 126 aa5.66□□□□□ -1.5
SMAD4-206ENST00000588860 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.65□□□□□ -1.5
SMAD4-206ENST00000588860 FAM168BA1KXE4 195 aa5.65□□□□□ -1.5
SMAD4-206ENST00000588860 ZNF73O43830 326 aaPredicted RBP5.65□□□□□ -1.5
SMAD4-206ENST00000588860 COX7BP24311 80 aa5.65□□□□□ -1.5
SMAD4-206ENST00000588860 LINC00575Q6W349 94 aa5.65□□□□□ -1.5
SMAD4-206ENST00000588860 C7orf33Q8WU49 177 aa5.65□□□□□ -1.5
SMAD4-206ENST00000588860 PLECQ15149 4684 aaKnown RBP5.64□□□□□ -1.51
SMAD4-206ENST00000588860 IGLV5-37A0A075B6J1 123 aa5.64□□□□□ -1.51
SMAD4-206ENST00000588860 LRCOL1A6NCL2 159 aa5.64□□□□□ -1.51
SMAD4-206ENST00000588860 FAM19A5Q7Z5A7 132 aaPredicted RBP5.64□□□□□ -1.51
SMAD4-206ENST00000588860 C22orf24Q9Y442 160 aa5.64□□□□□ -1.51
SMAD4-206ENST00000588860 STARD9Q9P2P6 4700 aa5.64□□□□□ -1.51
SMAD4-206ENST00000588860 TRBV7-6A0A0J9YX20 115 aa5.63□□□□□ -1.51
SMAD4-206ENST00000588860 hADV29S1A0JD25 119 aa5.63□□□□□ -1.51
SMAD4-206ENST00000588860 Q6ZRN7 208 aaPredicted RBP5.63□□□□□ -1.51
SMAD4-206ENST00000588860 KRTAP9-3Q9BYQ3 159 aa5.63□□□□□ -1.51
SMAD4-206ENST00000588860 VPS13DQ5THJ4 4388 aa5.63□□□□□ -1.51
SMAD4-206ENST00000588860 A0A096LNI7 61 aa5.62□□□□□ -1.51
SMAD4-206ENST00000588860 IGKV2-24A0A0C4DH68 120 aa5.62□□□□□ -1.51
SMAD4-206ENST00000588860 ELOF1P60002 83 aaKnown RBP5.62□□□□□ -1.51
SMAD4-206ENST00000588860 RPL37AP8A6NKH3 93 aa5.61□□□□□ -1.51
SMAD4-206ENST00000588860 C16orf90A8MZG2 172 aa5.61□□□□□ -1.51
SMAD4-206ENST00000588860 PRYO14603 147 aa5.61□□□□□ -1.51
SMAD4-206ENST00000588860 INAFM2P0DMQ5 153 aa5.61□□□□□ -1.51
SMAD4-206ENST00000588860 KRTAP7-1Q8IUC3 87 aa5.61□□□□□ -1.51
SMAD4-206ENST00000588860 KCNQ1DNQ9H478 68 aa5.61□□□□□ -1.51
SMAD4-206ENST00000588860 DNAH10Q8IVF4 4471 aa5.61□□□□□ -1.51
SMAD4-206ENST00000588860 A0A1B0GV72 72 aa5.6□□□□□ -1.51
SMAD4-206ENST00000588860 TMEM256-PLSCR3K7ERE1 68 aa5.6□□□□□ -1.51
SMAD4-206ENST00000588860 LY6G6CO95867 125 aa5.6□□□□□ -1.51
SMAD4-206ENST00000588860 Q6ZR54 194 aa5.6□□□□□ -1.51
SMAD4-206ENST00000588860 MRPL55Q7Z7F7 128 aaKnown RBP5.6□□□□□ -1.51
SMAD4-206ENST00000588860 CDIP1Q9H305 208 aa5.6□□□□□ -1.51
SMAD4-206ENST00000588860 PKIGQ9Y2B9 76 aa5.6□□□□□ -1.51
SMAD4-206ENST00000588860 KIAA1109Q2LD37 5005 aa5.6□□□□□ -1.51
SMAD4-206ENST00000588860 IGLV1-50A0A075B6I6 118 aa5.59□□□□□ -1.51
SMAD4-206ENST00000588860 KRTAP5-3Q6L8H2 238 aa5.59□□□□□ -1.51
SMAD4-206ENST00000588860 Q6ZQY7 126 aa5.59□□□□□ -1.51
SMAD4-206ENST00000588860 FRAS1Q86XX4 4008 aa5.58□□□□□ -1.52
SMAD4-206ENST00000588860 DNAH6Q9C0G6 4158 aa5.58□□□□□ -1.52
SMAD4-206ENST00000588860 A0A087WTM6 91 aa5.58□□□□□ -1.52
SMAD4-206ENST00000588860 ETDCA0A1B0GVM5 59 aa5.58□□□□□ -1.52
SMAD4-206ENST00000588860 CHTF8P0CG12 524 aa5.58□□□□□ -1.52
SMAD4-206ENST00000588860 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.58□□□□□ -1.52
SMAD4-206ENST00000588860 C9orf163Q8N9P6 203 aa5.58□□□□□ -1.52
SMAD4-206ENST00000588860 OBSCN-AS1Q96MR7 158 aa5.58□□□□□ -1.52
SMAD4-206ENST00000588860 SIGMAR1Q99720 223 aa5.58□□□□□ -1.52
SMAD4-206ENST00000588860 C14orf132Q9NPU4 83 aa5.58□□□□□ -1.52
SMAD4-206ENST00000588860 FAM240AA0A1B0GVK7 77 aa5.57□□□□□ -1.52
SMAD4-206ENST00000588860 A0A1W2PNN7 141 aa5.57□□□□□ -1.52
SMAD4-206ENST00000588860 H3BQ85 93 aa5.57□□□□□ -1.52
SMAD4-206ENST00000588860 C1orf134Q5TEV5 83 aa5.57□□□□□ -1.52
SMAD4-206ENST00000588860 GAGE2AQ6NT46 116 aa5.57□□□□□ -1.52
SMAD4-206ENST00000588860 ALMS1Q8TCU4 4167 aa5.57□□□□□ -1.52
SMAD4-206ENST00000588860 B5MCH6 92 aa5.56□□□□□ -1.52
SMAD4-206ENST00000588860 JMJD7-PLA2G4BH0Y9G9 81 aa5.56□□□□□ -1.52
SMAD4-206ENST00000588860 LINC00476Q8WZB0 136 aa5.56□□□□□ -1.52
SMAD4-206ENST00000588860 LAMTOR3Q9UHA4 124 aa5.56□□□□□ -1.52
SMAD4-206ENST00000588860 ACYP1P07311 99 aa5.55□□□□□ -1.52
SMAD4-206ENST00000588860 SPRR1AP35321 89 aa5.55□□□□□ -1.52
SMAD4-206ENST00000588860 XGP55808 180 aa5.55□□□□□ -1.52
SMAD4-206ENST00000588860 REG3GQ6UW15 175 aa5.55□□□□□ -1.52
SMAD4-206ENST00000588860 SDIM1Q6ZPB5 146 aa5.55□□□□□ -1.52
SMAD4-206ENST00000588860 Q6ZRX8 168 aa5.55□□□□□ -1.52
SMAD4-206ENST00000588860 DHRS4-AS1Q9P1J3 65 aa5.55□□□□□ -1.52
SMAD4-206ENST00000588860 KRTAP4-16G5E9R7 235 aaPredicted RBP5.54□□□□□ -1.52
SMAD4-206ENST00000588860 MT-ATP8P03928 68 aa5.54□□□□□ -1.52
SMAD4-206ENST00000588860 LINC00474Q9P2X8 69 aa5.54□□□□□ -1.52
SMAD4-206ENST00000588860 RTL8CO15255 209 aa5.53□□□□□ -1.52
SMAD4-206ENST00000588860 FUSP35637 526 aaKnown RBP eCLIP5.53□□□□□ -1.52
SMAD4-206ENST00000588860 UBE2BP63146 152 aa5.53□□□□□ -1.52
SMAD4-206ENST00000588860 PHF5AQ7RTV0 110 aaKnown RBP5.53□□□□□ -1.52
SMAD4-206ENST00000588860 ABCA13Q86UQ4 5058 aa5.53□□□□□ -1.52
SMAD4-206ENST00000588860 RBM3P98179 157 aaKnown RBP5.52□□□□□ -1.53
SMAD4-206ENST00000588860 DEFB105AQ8NG35 78 aa5.52□□□□□ -1.53
SMAD4-206ENST00000588860 DPH3Q96FX2 82 aa5.52□□□□□ -1.53
SMAD4-206ENST00000588860 Q9BRP9 147 aa5.52□□□□□ -1.53
SMAD4-206ENST00000588860 HECTD4Q9Y4D8 3996 aa5.51□□□□□ -1.53
SMAD4-206ENST00000588860 PANO1I0J062 215 aa5.51□□□□□ -1.53
SMAD4-206ENST00000588860 CCKP06307 115 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 166.7 ms