RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 CFC1BP0CG36 223 aa9.98□□□□□ -0.81
CCDC43-204ENST00000588687 JOSD1Q15040 202 aaPredicted RBP9.98□□□□□ -0.81
CCDC43-204ENST00000588687 H0Y8G0 127 aa9.97□□□□□ -0.81
CCDC43-204ENST00000588687 SPRR1BP22528 89 aa9.97□□□□□ -0.81
CCDC43-204ENST00000588687 LINC00310P59036 64 aa9.97□□□□□ -0.81
CCDC43-204ENST00000588687 S100A7L2Q5SY68 101 aa9.97□□□□□ -0.81
CCDC43-204ENST00000588687 IGLV8-61A0A075B6I0 122 aa9.96□□□□□ -0.82
CCDC43-204ENST00000588687 C5orf52A6NGY3 159 aa9.96□□□□□ -0.82
CCDC43-204ENST00000588687 HSBP1O75506 76 aa9.96□□□□□ -0.82
CCDC43-204ENST00000588687 APOC3P02656 99 aa9.96□□□□□ -0.82
CCDC43-204ENST00000588687 KRTAP10-6P60371 365 aaPredicted RBP9.96□□□□□ -0.82
CCDC43-204ENST00000588687 MIEN1Q9BRT3 115 aa9.96□□□□□ -0.82
CCDC43-204ENST00000588687 NMUP48645 174 aa9.95□□□□□ -0.82
CCDC43-204ENST00000588687 PLNP26678 52 aa9.94□□□□□ -0.82
CCDC43-204ENST00000588687 ADAMTSL4-AS1Q5T5F5 129 aa9.94□□□□□ -0.82
CCDC43-204ENST00000588687 C9orf92A6NGG3 77 aa9.93□□□□□ -0.82
CCDC43-204ENST00000588687 LIMD2Q9BT23 127 aa9.93□□□□□ -0.82
CCDC43-204ENST00000588687 SNAPINO95295 136 aa9.92□□□□□ -0.82
CCDC43-204ENST00000588687 SVBPQ8N300 66 aa9.92□□□□□ -0.82
CCDC43-204ENST00000588687 LEPROTL1O95214 131 aa9.91□□□□□ -0.82
CCDC43-204ENST00000588687 NPC2P61916 151 aa9.91□□□□□ -0.82
CCDC43-204ENST00000588687 A0A0J9YXY3 114 aa9.9□□□□□ -0.82
CCDC43-204ENST00000588687 DPM2O94777 84 aa9.9□□□□□ -0.82
CCDC43-204ENST00000588687 LGALS3P17931 250 aaKnown RBP9.9□□□□□ -0.82
CCDC43-204ENST00000588687 HRCT1Q6UXD1 115 aa9.9□□□□□ -0.82
CCDC43-204ENST00000588687 PMCHL2Q9BQD1 86 aa9.9□□□□□ -0.82
CCDC43-204ENST00000588687 SERF1AO75920 110 aa9.89□□□□□ -0.83
CCDC43-204ENST00000588687 HERVK_113P61574 105 aa9.88□□□□□ -0.83
CCDC43-204ENST00000588687 LITAFQ99732 161 aa9.87□□□□□ -0.83
CCDC43-204ENST00000588687 IGKCP01834 107 aa9.86□□□□□ -0.83
CCDC43-204ENST00000588687 CD164Q04900 197 aa9.84□□□□□ -0.83
CCDC43-204ENST00000588687 NDUFA5Q16718 116 aa9.84□□□□□ -0.83
CCDC43-204ENST00000588687 SLC25A34Q6PIV7 304 aa9.84□□□□□ -0.83
CCDC43-204ENST00000588687 SPANXCQ9NY87 97 aa9.84□□□□□ -0.83
CCDC43-204ENST00000588687 DHRS4-AS1Q9P1J3 65 aa9.84□□□□□ -0.83
CCDC43-204ENST00000588687 E9PLD3 99 aa9.83□□□□□ -0.84
CCDC43-204ENST00000588687 TRGC2P03986 189 aa9.83□□□□□ -0.84
CCDC43-204ENST00000588687 HSPB8Q9UJY1 196 aa9.83□□□□□ -0.84
CCDC43-204ENST00000588687 HINT1P49773 126 aaPredicted RBP9.82□□□□□ -0.84
CCDC43-204ENST00000588687 ELOF1P60002 83 aaKnown RBP9.82□□□□□ -0.84
CCDC43-204ENST00000588687 Q5XG85 94 aa9.82□□□□□ -0.84
CCDC43-204ENST00000588687 LINC00308Q8TCZ7 52 aa9.82□□□□□ -0.84
CCDC43-204ENST00000588687 LAMTOR3Q9UHA4 124 aa9.82□□□□□ -0.84
CCDC43-204ENST00000588687 CBY1Q9Y3M2 126 aa9.82□□□□□ -0.84
CCDC43-204ENST00000588687 FABP4P15090 132 aa9.81□□□□□ -0.84
CCDC43-204ENST00000588687 RPL37P61927 97 aaKnown RBP9.79□□□□□ -0.84
CCDC43-204ENST00000588687 Q1RN00 199 aa9.79□□□□□ -0.84
CCDC43-204ENST00000588687 C1orf195Q5TG92 126 aa9.79□□□□□ -0.84
CCDC43-204ENST00000588687 SMIM29Q86T20 159 aa9.78□□□□□ -0.84
CCDC43-204ENST00000588687 SPANXDQ9BXN6 97 aa9.78□□□□□ -0.84
CCDC43-204ENST00000588687 H7C2G1 150 aa9.77□□□□□ -0.85
CCDC43-204ENST00000588687 TIMM17BO60830 172 aa9.77□□□□□ -0.85
CCDC43-204ENST00000588687 OR13C6PQ8NH95 151 aa9.77□□□□□ -0.85
CCDC43-204ENST00000588687 PRO1933Q9H354 126 aa9.77□□□□□ -0.85
CCDC43-204ENST00000588687 COX7BP24311 80 aa9.76□□□□□ -0.85
CCDC43-204ENST00000588687 C6orf99Q4VX62 202 aa9.76□□□□□ -0.85
CCDC43-204ENST00000588687 M0R2T5 61 aa9.74□□□□□ -0.85
CCDC43-204ENST00000588687 A0A0G2JQZ4 141 aa9.73□□□□□ -0.85
CCDC43-204ENST00000588687 TEX49A0A1B0GTD5 131 aa9.73□□□□□ -0.85
CCDC43-204ENST00000588687 IGLV5-48A0A075B6I7 105 aa9.72□□□□□ -0.85
CCDC43-204ENST00000588687 DEFB105AQ8NG35 78 aa9.72□□□□□ -0.85
CCDC43-204ENST00000588687 TAL2Q16559 108 aa9.71□□□□□ -0.86
CCDC43-204ENST00000588687 COX6B2Q6YFQ2 88 aa9.7□□□□□ -0.86
CCDC43-204ENST00000588687 TTTY13Q9BZ97 58 aa9.7□□□□□ -0.86
CCDC43-204ENST00000588687 TRBV7-6A0A0J9YX20 115 aa9.69□□□□□ -0.86
CCDC43-204ENST00000588687 AKR1D1P51857 326 aa9.69□□□□□ -0.86
CCDC43-204ENST00000588687 SSPOA2VEC9 5147 aa9.68□□□□□ -0.86
CCDC43-204ENST00000588687 SYS1-DBNDD2H3BUS1 97 aa9.68□□□□□ -0.86
CCDC43-204ENST00000588687 USH2AO75445 5202 aa9.67□□□□□ -0.86
CCDC43-204ENST00000588687 ZNF815PA8K554 130 aa9.67□□□□□ -0.86
CCDC43-204ENST00000588687 LINC00518Q8N0U6 118 aa9.67□□□□□ -0.86
CCDC43-204ENST00000588687 LINC01545Q5VT33 79 aa9.66□□□□□ -0.86
CCDC43-204ENST00000588687 A0A1B0GWB2 263 aa9.64□□□□□ -0.87
CCDC43-204ENST00000588687 COLCA2A8K830 154 aa9.63□□□□□ -0.87
CCDC43-204ENST00000588687 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.58□□□□□ -0.88
CCDC43-204ENST00000588687 TCL1BO95988 128 aa9.57□□□□□ -0.88
CCDC43-204ENST00000588687 PET117Q6UWS5 81 aa9.57□□□□□ -0.88
CCDC43-204ENST00000588687 HIST1H2BKO60814 126 aa9.55□□□□□ -0.88
CCDC43-204ENST00000588687 HIST1H2BJP06899 126 aa9.55□□□□□ -0.88
CCDC43-204ENST00000588687 HIST1H2BOP23527 126 aa9.55□□□□□ -0.88
CCDC43-204ENST00000588687 HIST1H2BBP33778 126 aa9.55□□□□□ -0.88
CCDC43-204ENST00000588687 HIST1H2BDP58876 126 aa9.55□□□□□ -0.88
CCDC43-204ENST00000588687 HIST1H2BCP62807 126 aa9.55□□□□□ -0.88
CCDC43-204ENST00000588687 HIST2H2BEQ16778 126 aa9.55□□□□□ -0.88
CCDC43-204ENST00000588687 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.55□□□□□ -0.88
CCDC43-204ENST00000588687 HIST1H2BHQ93079 126 aa9.55□□□□□ -0.88
CCDC43-204ENST00000588687 HIST1H2BNQ99877 126 aa9.55□□□□□ -0.88
CCDC43-204ENST00000588687 HIST1H2BMQ99879 126 aa9.55□□□□□ -0.88
CCDC43-204ENST00000588687 A4D1N5 150 aa9.54□□□□□ -0.88
CCDC43-204ENST00000588687 KRTAP9-7A8MTY7 169 aa9.54□□□□□ -0.88
CCDC43-204ENST00000588687 A6NDN8 102 aa9.53□□□□□ -0.88
CCDC43-204ENST00000588687 IFITM1P13164 125 aa9.53□□□□□ -0.88
CCDC43-204ENST00000588687 C3orf79P0CE67 100 aa9.52□□□□□ -0.89
CCDC43-204ENST00000588687 SCGB1D4Q6XE38 83 aa9.52□□□□□ -0.89
CCDC43-204ENST00000588687 Q75L30 129 aa9.52□□□□□ -0.89
CCDC43-204ENST00000588687 SMIM11BQ8TCY0 68 aa9.52□□□□□ -0.89
CCDC43-204ENST00000588687 KRTAP9-8Q9BYQ0 159 aa9.52□□□□□ -0.89
CCDC43-204ENST00000588687 ANKRD39Q53RE8 183 aa9.51□□□□□ -0.89
CCDC43-204ENST00000588687 NHP2Q9NX24 153 aaKnown RBP9.51□□□□□ -0.89
CCDC43-204ENST00000588687 Q6ZVH6 145 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms