RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 HIGD2AQ9BW72 106 aa12.02□□□□□ -0.49
DDX39A-207ENST00000588542 TRAV23DV6A0A075B6W5 121 aa12.01□□□□□ -0.49
DDX39A-207ENST00000588542 B5MCH6 92 aa12.01□□□□□ -0.49
DDX39A-207ENST00000588542 COX8AP10176 69 aa12.01□□□□□ -0.49
DDX39A-207ENST00000588542 COPS9Q8WXC6 57 aa12.01□□□□□ -0.49
DDX39A-207ENST00000588542 LINC00518Q8N0U6 118 aa12□□□□□ -0.49
DDX39A-207ENST00000588542 ANAPC11Q9NYG5 84 aa12□□□□□ -0.49
DDX39A-207ENST00000588542 A0A087X002 238 aa11.99□□□□□ -0.49
DDX39A-207ENST00000588542 OR13C6PQ8NH95 151 aa11.99□□□□□ -0.49
DDX39A-207ENST00000588542 PAM16Q9Y3D7 125 aa11.99□□□□□ -0.49
DDX39A-207ENST00000588542 SPATA45Q537H7 98 aa11.98□□□□□ -0.49
DDX39A-207ENST00000588542 SMCR5Q8TEV8 140 aa11.98□□□□□ -0.49
DDX39A-207ENST00000588542 ZNF73O43830 326 aaPredicted RBP11.97□□□□□ -0.49
DDX39A-207ENST00000588542 HMCN2Q8NDA2 5059 aa11.97□□□□□ -0.49
DDX39A-207ENST00000588542 DLEU1O43261 78 aa11.96□□□□□ -0.49
DDX39A-207ENST00000588542 RPL13AP40429 203 aaKnown RBP11.96□□□□□ -0.49
DDX39A-207ENST00000588542 PYY3Q5JQD4 70 aa11.96□□□□□ -0.49
DDX39A-207ENST00000588542 Q6ZRX8 168 aa11.96□□□□□ -0.49
DDX39A-207ENST00000588542 VAMP8Q9BV40 100 aa11.96□□□□□ -0.49
DDX39A-207ENST00000588542 C14orf144Q96I85 54 aa11.95□□□□□ -0.5
DDX39A-207ENST00000588542 Q9BRP9 147 aa11.95□□□□□ -0.5
DDX39A-207ENST00000588542 CBY1Q9Y3M2 126 aa11.95□□□□□ -0.5
DDX39A-207ENST00000588542 CRYGAP11844 174 aa11.94□□□□□ -0.5
DDX39A-207ENST00000588542 FAM229BQ4G0N7 80 aa11.94□□□□□ -0.5
DDX39A-207ENST00000588542 SPRR4Q96PI1 79 aa11.94□□□□□ -0.5
DDX39A-207ENST00000588542 KRTAP13-2Q52LG2 175 aa11.93□□□□□ -0.5
DDX39A-207ENST00000588542 ERC2-IT1O76042 136 aa11.92□□□□□ -0.5
DDX39A-207ENST00000588542 A6NDN8 102 aa11.89□□□□□ -0.51
DDX39A-207ENST00000588542 ZNF706Q9Y5V0 76 aaPredicted RBP11.89□□□□□ -0.51
DDX39A-207ENST00000588542 A4D1N5 150 aa11.88□□□□□ -0.51
DDX39A-207ENST00000588542 SLC25A34Q6PIV7 304 aa11.88□□□□□ -0.51
DDX39A-207ENST00000588542 TYMSOSQ8TAI1 123 aa11.88□□□□□ -0.51
DDX39A-207ENST00000588542 HIST1H4GQ99525 98 aa11.88□□□□□ -0.51
DDX39A-207ENST00000588542 TRAV13-2A0A0B4J235 113 aa11.87□□□□□ -0.51
DDX39A-207ENST00000588542 HINT1P49773 126 aaPredicted RBP11.87□□□□□ -0.51
DDX39A-207ENST00000588542 C6orf99Q4VX62 202 aa11.87□□□□□ -0.51
DDX39A-207ENST00000588542 C2orf91Q6ZV80 131 aa11.87□□□□□ -0.51
DDX39A-207ENST00000588542 HIGD1BQ9P298 99 aa11.87□□□□□ -0.51
DDX39A-207ENST00000588542 ELOF1P60002 83 aaKnown RBP11.85□□□□□ -0.51
DDX39A-207ENST00000588542 LINC00483Q53H64 154 aa11.84□□□□□ -0.51
DDX39A-207ENST00000588542 C3orf22Q8N5N4 141 aa11.84□□□□□ -0.51
DDX39A-207ENST00000588542 COX7BP24311 80 aa11.83□□□□□ -0.52
DDX39A-207ENST00000588542 TRBV7-6A0A0J9YX20 115 aa11.82□□□□□ -0.52
DDX39A-207ENST00000588542 SMIM11BQ8TCY0 68 aa11.82□□□□□ -0.52
DDX39A-207ENST00000588542 GAGE2AQ6NT46 116 aa11.81□□□□□ -0.52
DDX39A-207ENST00000588542 DHRS4-AS1Q9P1J3 65 aa11.8□□□□□ -0.52
DDX39A-207ENST00000588542 ST20-AS1Q8NBB2 130 aa11.79□□□□□ -0.52
DDX39A-207ENST00000588542 C12orf57Q99622 126 aa11.79□□□□□ -0.52
DDX39A-207ENST00000588542 A0A1B0GWB2 263 aa11.77□□□□□ -0.53
DDX39A-207ENST00000588542 TAL2Q16559 108 aa11.75□□□□□ -0.53
DDX39A-207ENST00000588542 CFC1BP0CG36 223 aa11.74□□□□□ -0.53
DDX39A-207ENST00000588542 CFC1P0CG37 223 aa11.74□□□□□ -0.53
DDX39A-207ENST00000588542 LINC00304Q8N9R0 145 aa11.74□□□□□ -0.53
DDX39A-207ENST00000588542 TSPAN13O95857 204 aa11.73□□□□□ -0.53
DDX39A-207ENST00000588542 CEND1Q8N111 149 aa11.73□□□□□ -0.53
DDX39A-207ENST00000588542 SPRR1BP22528 89 aa11.71□□□□□ -0.53
DDX39A-207ENST00000588542 IGLV9-49A0A0B4J1Y8 123 aa11.69□□□□□ -0.54
DDX39A-207ENST00000588542 A0A0B4J2C4 111 aa11.69□□□□□ -0.54
DDX39A-207ENST00000588542 FXYD2P54710 66 aa11.68□□□□□ -0.54
DDX39A-207ENST00000588542 MOBPQ13875 183 aa11.68□□□□□ -0.54
DDX39A-207ENST00000588542 Q8NBF4 154 aa11.68□□□□□ -0.54
DDX39A-207ENST00000588542 UQCR10Q9UDW1 63 aa11.68□□□□□ -0.54
DDX39A-207ENST00000588542 LRP2P98164 4655 aa11.68□□□□□ -0.54
DDX39A-207ENST00000588542 VAMP3Q15836 100 aa11.67□□□□□ -0.54
DDX39A-207ENST00000588542 RAB37Q96AX2 223 aa11.67□□□□□ -0.54
DDX39A-207ENST00000588542 LINC01547P58512 204 aaPredicted RBP11.66□□□□□ -0.54
DDX39A-207ENST00000588542 HSD52Q0P140 79 aa11.65□□□□□ -0.54
DDX39A-207ENST00000588542 LINC00575Q6W349 94 aa11.65□□□□□ -0.54
DDX39A-207ENST00000588542 SSBP3-AS1Q7Z2R9 100 aa11.65□□□□□ -0.54
DDX39A-207ENST00000588542 TMEM238LA0A1B0GVL6 79 aa11.64□□□□□ -0.55
DDX39A-207ENST00000588542 A6NJY4 79 aa11.64□□□□□ -0.55
DDX39A-207ENST00000588542 H7C2G1 150 aa11.64□□□□□ -0.55
DDX39A-207ENST00000588542 CTAG1AP78358 180 aa11.64□□□□□ -0.55
DDX39A-207ENST00000588542 DEFB105AQ8NG35 78 aa11.64□□□□□ -0.55
DDX39A-207ENST00000588542 NHP2Q9NX24 153 aaKnown RBP11.64□□□□□ -0.55
DDX39A-207ENST00000588542 LPAP08519 4548 aa11.64□□□□□ -0.55
DDX39A-207ENST00000588542 IGLV5-48A0A075B6I7 105 aa11.63□□□□□ -0.55
DDX39A-207ENST00000588542 SPAG11AQ6PDA7 123 aa11.63□□□□□ -0.55
DDX39A-207ENST00000588542 TEX49A0A1B0GTD5 131 aa11.62□□□□□ -0.55
DDX39A-207ENST00000588542 SMIM6P0DI80 62 aa11.61□□□□□ -0.55
DDX39A-207ENST00000588542 BVES-AS1Q5T3Y7 98 aa11.61□□□□□ -0.55
DDX39A-207ENST00000588542 C9orf153Q5TBE3 101 aa11.61□□□□□ -0.55
DDX39A-207ENST00000588542 SLC25A20O43772 301 aa11.6□□□□□ -0.55
DDX39A-207ENST00000588542 SMIM29Q86T20 159 aa11.6□□□□□ -0.55
DDX39A-207ENST00000588542 PRO1854Q9UHT4 67 aa11.6□□□□□ -0.55
DDX39A-207ENST00000588542 UBR4Q5T4S7 5183 aa11.59□□□□□ -0.55
DDX39A-207ENST00000588542 LOC105371267A0A1B0GV96 52 aa11.59□□□□□ -0.55
DDX39A-207ENST00000588542 hADV29S1A0JD25 119 aa11.59□□□□□ -0.55
DDX39A-207ENST00000588542 C4orf48Q5BLP8 95 aa11.59□□□□□ -0.55
DDX39A-207ENST00000588542 PRO1933Q9H354 126 aa11.59□□□□□ -0.55
DDX39A-207ENST00000588542 LAMTOR3Q9UHA4 124 aa11.59□□□□□ -0.55
DDX39A-207ENST00000588542 PRR4Q16378 134 aa11.58□□□□□ -0.56
DDX39A-207ENST00000588542 Q1RN00 199 aa11.58□□□□□ -0.56
DDX39A-207ENST00000588542 Q8N377 158 aa11.58□□□□□ -0.56
DDX39A-207ENST00000588542 SPINK1P00995 79 aa11.56□□□□□ -0.56
DDX39A-207ENST00000588542 RETNLBQ9BQ08 111 aa11.56□□□□□ -0.56
DDX39A-207ENST00000588542 Q6ZQY7 126 aa11.55□□□□□ -0.56
DDX39A-207ENST00000588542 K7ERJ3 54 aa11.53□□□□□ -0.56
DDX39A-207ENST00000588542 H0YGX0 51 aa11.52□□□□□ -0.57
DDX39A-207ENST00000588542 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms