RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-223ENST00000588516 ELOF1P60002 83 aaKnown RBP9.36□□□□□ -0.91
NEDD4L-223ENST00000588516 USP17L23D6RBM5 183 aa9.35□□□□□ -0.91
NEDD4L-223ENST00000588516 VPREB1P12018 145 aa9.35□□□□□ -0.91
NEDD4L-223ENST00000588516 Q6ZQY7 126 aa9.35□□□□□ -0.91
NEDD4L-223ENST00000588516 WFDC10BQ8IUB3 73 aa9.35□□□□□ -0.91
NEDD4L-223ENST00000588516 Q8NDZ9 215 aa9.35□□□□□ -0.91
NEDD4L-223ENST00000588516 DNAH1Q9P2D7 4330 aa9.35□□□□□ -0.91
NEDD4L-223ENST00000588516 KRTAP26-1Q6PEX3 210 aa9.34□□□□□ -0.91
NEDD4L-223ENST00000588516 C11orf45Q8TAV5 145 aa9.34□□□□□ -0.91
NEDD4L-223ENST00000588516 RMI2Q96E14 147 aa9.34□□□□□ -0.91
NEDD4L-223ENST00000588516 DEFB131BA0A096LNP1 70 aa9.33□□□□□ -0.92
NEDD4L-223ENST00000588516 Q6ZTC4 211 aa9.33□□□□□ -0.92
NEDD4L-223ENST00000588516 STAB2Q8WWQ8 2551 aa9.33□□□□□ -0.92
NEDD4L-223ENST00000588516 CXCL6P80162 114 aa9.32□□□□□ -0.92
NEDD4L-223ENST00000588516 SYCNQ0VAF6 134 aa9.32□□□□□ -0.92
NEDD4L-223ENST00000588516 ESRGQ1W209 222 aa9.32□□□□□ -0.92
NEDD4L-223ENST00000588516 XAGE1AQ9HD64 81 aa9.32□□□□□ -0.92
NEDD4L-223ENST00000588516 HIGD2BQ4VC39 106 aa9.31□□□□□ -0.92
NEDD4L-223ENST00000588516 Q6ZRU5 148 aa9.31□□□□□ -0.92
NEDD4L-223ENST00000588516 IGKV2D-24A0A075B6R9 120 aa9.31□□□□□ -0.92
NEDD4L-223ENST00000588516 DNAH10OSP0CZ25 163 aa9.31□□□□□ -0.92
NEDD4L-223ENST00000588516 C15orf56Q8N910 161 aa9.31□□□□□ -0.92
NEDD4L-223ENST00000588516 NKAPP1Q8N9T2 125 aa9.31□□□□□ -0.92
NEDD4L-223ENST00000588516 PLA2G2DQ9UNK4 145 aa9.31□□□□□ -0.92
NEDD4L-223ENST00000588516 TRAV10A0A0B4J240 114 aa9.3□□□□□ -0.92
NEDD4L-223ENST00000588516 TLX1NBP0CAT3 122 aa9.3□□□□□ -0.92
NEDD4L-223ENST00000588516 UPK3BQ9BT76 320 aa9.3□□□□□ -0.92
NEDD4L-223ENST00000588516 TRBV7-4A0A0J9YYF1 115 aa9.29□□□□□ -0.92
NEDD4L-223ENST00000588516 A0A1B0GW54 56 aa9.29□□□□□ -0.92
NEDD4L-223ENST00000588516 TMEM258P61165 79 aa9.29□□□□□ -0.92
NEDD4L-223ENST00000588516 HYDINQ4G0P3 5121 aa9.28□□□□□ -0.92
NEDD4L-223ENST00000588516 LINC00528Q8N1L1 170 aa9.28□□□□□ -0.92
NEDD4L-223ENST00000588516 RETNQ9HD89 108 aa9.28□□□□□ -0.92
NEDD4L-223ENST00000588516 RPS28P62857 69 aaKnown RBP9.27□□□□□ -0.93
NEDD4L-223ENST00000588516 KCNQ1DNQ9H478 68 aa9.27□□□□□ -0.93
NEDD4L-223ENST00000588516 DHRS4-AS1Q9P1J3 65 aa9.27□□□□□ -0.93
NEDD4L-223ENST00000588516 Q6ZVQ6 151 aa9.26□□□□□ -0.93
NEDD4L-223ENST00000588516 A0A087WVE0 104 aa9.25□□□□□ -0.93
NEDD4L-223ENST00000588516 LINC01547P58512 204 aaPredicted RBP9.25□□□□□ -0.93
NEDD4L-223ENST00000588516 HAMPP81172 84 aa9.25□□□□□ -0.93
NEDD4L-223ENST00000588516 LYSTQ99698 3801 aa9.24□□□□□ -0.93
NEDD4L-223ENST00000588516 TRAV7A0A075B6U4 112 aa9.24□□□□□ -0.93
NEDD4L-223ENST00000588516 J3KT08 172 aa9.24□□□□□ -0.93
NEDD4L-223ENST00000588516 HERC2O95714 4834 aa9.24□□□□□ -0.93
NEDD4L-223ENST00000588516 DNAH7Q8WXX0 4024 aa9.23□□□□□ -0.93
NEDD4L-223ENST00000588516 IGLV5-37A0A075B6J1 123 aa9.23□□□□□ -0.93
NEDD4L-223ENST00000588516 LOC107984640A0A0U1RRK4 108 aa9.23□□□□□ -0.93
NEDD4L-223ENST00000588516 PRYO14603 147 aa9.23□□□□□ -0.93
NEDD4L-223ENST00000588516 Q6ZRP5 223 aa9.22□□□□□ -0.93
NEDD4L-223ENST00000588516 HUWE1Q7Z6Z7 4374 aaKnown RBP9.21□□□□□ -0.93
NEDD4L-223ENST00000588516 FAM19A1Q7Z5A9 133 aa9.21□□□□□ -0.94
NEDD4L-223ENST00000588516 STARD9Q9P2P6 4700 aa9.19□□□□□ -0.94
NEDD4L-223ENST00000588516 ETDCA0A1B0GVM5 59 aa9.17□□□□□ -0.94
NEDD4L-223ENST00000588516 C7orf33Q8WU49 177 aa9.17□□□□□ -0.94
NEDD4L-223ENST00000588516 CSMD3Q7Z407 3707 aa9.17□□□□□ -0.94
NEDD4L-223ENST00000588516 PCLOQ9Y6V0 5065 aa9.16□□□□□ -0.94
NEDD4L-223ENST00000588516 FUSP35637 526 aaKnown RBP eCLIP9.15□□□□□ -0.946e-8■□□□□ 8.3
NEDD4L-223ENST00000588516 NREPQ16612 68 aa9.15□□□□□ -0.94
NEDD4L-223ENST00000588516 RYR1P21817 5038 aa9.15□□□□□ -0.95
NEDD4L-223ENST00000588516 NDUFC1O43677 76 aa9.14□□□□□ -0.95
NEDD4L-223ENST00000588516 TM2D3Q9BRN9 247 aa9.14□□□□□ -0.95
NEDD4L-223ENST00000588516 PKIGQ9Y2B9 76 aa9.14□□□□□ -0.95
NEDD4L-223ENST00000588516 LINC00588Q9Y4M8 146 aa9.14□□□□□ -0.95
NEDD4L-223ENST00000588516 IGLV5-48A0A075B6I7 105 aa9.13□□□□□ -0.95
NEDD4L-223ENST00000588516 Q6ZRX8 168 aa9.13□□□□□ -0.95
NEDD4L-223ENST00000588516 IGLV1-50A0A075B6I6 118 aa9.12□□□□□ -0.95
NEDD4L-223ENST00000588516 SPRR1AP35321 89 aa9.12□□□□□ -0.95
NEDD4L-223ENST00000588516 ERC2-IT1O76042 136 aa9.11□□□□□ -0.95
NEDD4L-223ENST00000588516 M0R2N4 97 aa9.1□□□□□ -0.95
NEDD4L-223ENST00000588516 SERTAD4-AS1Q5TG53 156 aa9.1□□□□□ -0.95
NEDD4L-223ENST00000588516 C14orf177Q52M58 125 aa9.09□□□□□ -0.95
NEDD4L-223ENST00000588516 DPH3Q96FX2 82 aa9.09□□□□□ -0.95
NEDD4L-223ENST00000588516 BPY2O14599 106 aa9.08□□□□□ -0.96
NEDD4L-223ENST00000588516 KLKP1Q107X0 134 aa9.08□□□□□ -0.96
NEDD4L-223ENST00000588516 MRPL55Q7Z7F7 128 aaKnown RBP9.08□□□□□ -0.96
NEDD4L-223ENST00000588516 C20orf197Q8N268 126 aa9.08□□□□□ -0.96
NEDD4L-223ENST00000588516 Q8N377 158 aa9.08□□□□□ -0.96
NEDD4L-223ENST00000588516 PLECQ15149 4684 aaKnown RBP9.08□□□□□ -0.96
NEDD4L-223ENST00000588516 ATP5EP56381 51 aaPredicted RBP9.07□□□□□ -0.96
NEDD4L-223ENST00000588516 KRTAP4-16G5E9R7 235 aaPredicted RBP9.06□□□□□ -0.96
NEDD4L-223ENST00000588516 DEFB105AQ8NG35 78 aa9.06□□□□□ -0.96
NEDD4L-223ENST00000588516 LCE2AQ5TA79 106 aaPredicted RBP9.05□□□□□ -0.96
NEDD4L-223ENST00000588516 FAM236DA0A1B0GTK5 79 aa9.05□□□□□ -0.96
NEDD4L-223ENST00000588516 F8WEM9 126 aa9.05□□□□□ -0.96
NEDD4L-223ENST00000588516 FAM236CP0DP71 79 aa9.05□□□□□ -0.96
NEDD4L-223ENST00000588516 REG3GQ6UW15 175 aa9.05□□□□□ -0.96
NEDD4L-223ENST00000588516 C1orf137Q5JT78 98 aa9.04□□□□□ -0.96
NEDD4L-223ENST00000588516 RPL37AP8A6NKH3 93 aa9.03□□□□□ -0.96
NEDD4L-223ENST00000588516 CNBPP62633 177 aaKnown RBP9.03□□□□□ -0.96
NEDD4L-223ENST00000588516 UBE2BP63146 152 aa9.03□□□□□ -0.96
NEDD4L-223ENST00000588516 Q8NBF4 154 aa9.03□□□□□ -0.96
NEDD4L-223ENST00000588516 FRAS1Q86XX4 4008 aa9.02□□□□□ -0.97
NEDD4L-223ENST00000588516 LY6G6CO95867 125 aa9.02□□□□□ -0.97
NEDD4L-223ENST00000588516 IGKV4-1P06312 121 aa9.01□□□□□ -0.97
NEDD4L-223ENST00000588516 TNP2Q05952 138 aa9.01□□□□□ -0.97
NEDD4L-223ENST00000588516 SPRR4Q96PI1 79 aa9.01□□□□□ -0.97
NEDD4L-223ENST00000588516 Q9BRP9 147 aa9.01□□□□□ -0.97
NEDD4L-223ENST00000588516 SERP1Q9Y6X1 66 aa9.01□□□□□ -0.97
NEDD4L-223ENST00000588516 ALMS1Q8TCU4 4167 aa9□□□□□ -0.97
NEDD4L-223ENST00000588516 C16orf90A8MZG2 172 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms