RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 FAT3Q8TDW7 4589 aa6.04□□□□□ -1.44
TPM4-207ENST00000588032 TRBV10-3A0A0K0K1G6 114 aa6.03□□□□□ -1.44
TPM4-207ENST00000588032 CRYGAP11844 174 aa6.03□□□□□ -1.44
TPM4-207ENST00000588032 DDTP30046 118 aa6.03□□□□□ -1.44
TPM4-207ENST00000588032 S100A7L2Q5SY68 101 aa6.03□□□□□ -1.44
TPM4-207ENST00000588032 LITAFQ99732 161 aa6.03□□□□□ -1.44
TPM4-207ENST00000588032 KRTAP4-2Q9BYR5 136 aa6.03□□□□□ -1.44
TPM4-207ENST00000588032 CBY1Q9Y3M2 126 aa6.03□□□□□ -1.44
TPM4-207ENST00000588032 FAM229BQ4G0N7 80 aa6.02□□□□□ -1.45
TPM4-207ENST00000588032 ANKRD39Q53RE8 183 aa6.02□□□□□ -1.45
TPM4-207ENST00000588032 SOSTDC1Q6X4U4 206 aa6.02□□□□□ -1.45
TPM4-207ENST00000588032 SCGB1D4Q6XE38 83 aa6.02□□□□□ -1.45
TPM4-207ENST00000588032 ATOH7Q8N100 152 aa6.02□□□□□ -1.45
TPM4-207ENST00000588032 LINC00308Q8TCZ7 52 aa6.02□□□□□ -1.45
TPM4-207ENST00000588032 COPS9Q8WXC6 57 aa6.02□□□□□ -1.45
TPM4-207ENST00000588032 SPANXCQ9NY87 97 aa6.02□□□□□ -1.45
TPM4-207ENST00000588032 ETDCA0A1B0GVM5 59 aa6.01□□□□□ -1.45
TPM4-207ENST00000588032 HSBP1L1C9JCN9 74 aa6.01□□□□□ -1.45
TPM4-207ENST00000588032 IGLV6-57P01721 117 aa6.01□□□□□ -1.45
TPM4-207ENST00000588032 NPC2P61916 151 aa6.01□□□□□ -1.45
TPM4-207ENST00000588032 Q6ZVH6 145 aa6.01□□□□□ -1.45
TPM4-207ENST00000588032 TTTY13Q9BZ97 58 aa6.01□□□□□ -1.45
TPM4-207ENST00000588032 HERC1Q15751 4861 aa6□□□□□ -1.45
TPM4-207ENST00000588032 C5orf52A6NGY3 159 aa6□□□□□ -1.45
TPM4-207ENST00000588032 KRTAP4-16G5E9R7 235 aaPredicted RBP6□□□□□ -1.45
TPM4-207ENST00000588032 LINC00518Q8N0U6 118 aa6□□□□□ -1.45
TPM4-207ENST00000588032 HIGD2AQ9BW72 106 aa6□□□□□ -1.45
TPM4-207ENST00000588032 SPANXDQ9BXN6 97 aa6□□□□□ -1.45
TPM4-207ENST00000588032 PPDPFQ9H3Y8 114 aa6□□□□□ -1.45
TPM4-207ENST00000588032 ZNF706Q9Y5V0 76 aaPredicted RBP6□□□□□ -1.45
TPM4-207ENST00000588032 IFITM1P13164 125 aa5.99□□□□□ -1.45
TPM4-207ENST00000588032 TYMSOSQ8TAI1 123 aa5.99□□□□□ -1.45
TPM4-207ENST00000588032 A0A087X002 238 aa5.98□□□□□ -1.45
TPM4-207ENST00000588032 B5MCH6 92 aa5.98□□□□□ -1.45
TPM4-207ENST00000588032 HINT1P49773 126 aaPredicted RBP5.98□□□□□ -1.45
TPM4-207ENST00000588032 PCP2Q8IVA1 136 aa5.98□□□□□ -1.45
TPM4-207ENST00000588032 TRAV23DV6A0A075B6W5 121 aa5.97□□□□□ -1.45
TPM4-207ENST00000588032 JOSD1Q15040 202 aaPredicted RBP5.97□□□□□ -1.45
TPM4-207ENST00000588032 Q6ZRX8 168 aa5.97□□□□□ -1.45
TPM4-207ENST00000588032 OR13C6PQ8NH95 151 aa5.97□□□□□ -1.45
TPM4-207ENST00000588032 SMCR5Q8TEV8 140 aa5.97□□□□□ -1.45
TPM4-207ENST00000588032 ZNF73O43830 326 aaPredicted RBP5.96□□□□□ -1.46
TPM4-207ENST00000588032 SCGB1D1O95968 90 aa5.96□□□□□ -1.46
TPM4-207ENST00000588032 SPRR4Q96PI1 79 aa5.96□□□□□ -1.46
TPM4-207ENST00000588032 ANAPC11Q9NYG5 84 aa5.96□□□□□ -1.46
TPM4-207ENST00000588032 CTAG1AP78358 180 aa5.95□□□□□ -1.46
TPM4-207ENST00000588032 KRTAP13-2Q52LG2 175 aa5.94□□□□□ -1.46
TPM4-207ENST00000588032 MUSTN1Q8IVN3 82 aa5.94□□□□□ -1.46
TPM4-207ENST00000588032 TNXBP22105 4242 aa5.93□□□□□ -1.46
TPM4-207ENST00000588032 LINC00483Q53H64 154 aa5.92□□□□□ -1.46
TPM4-207ENST00000588032 Q9BRP9 147 aa5.92□□□□□ -1.46
TPM4-207ENST00000588032 TRAV13-2A0A0B4J235 113 aa5.91□□□□□ -1.46
TPM4-207ENST00000588032 GAGE2AQ6NT46 116 aa5.91□□□□□ -1.46
TPM4-207ENST00000588032 SPAG11AQ6PDA7 123 aa5.91□□□□□ -1.46
TPM4-207ENST00000588032 LINC00304Q8N9R0 145 aa5.91□□□□□ -1.46
TPM4-207ENST00000588032 DHRS4-AS1Q9P1J3 65 aa5.91□□□□□ -1.46
TPM4-207ENST00000588032 TRBV7-6A0A0J9YX20 115 aa5.9□□□□□ -1.46
TPM4-207ENST00000588032 A6NDN8 102 aa5.9□□□□□ -1.46
TPM4-207ENST00000588032 DLEU1O43261 78 aa5.9□□□□□ -1.46
TPM4-207ENST00000588032 ERC2-IT1O76042 136 aa5.9□□□□□ -1.46
TPM4-207ENST00000588032 TSPAN13O95857 204 aa5.9□□□□□ -1.46
TPM4-207ENST00000588032 COX8AP10176 69 aa5.9□□□□□ -1.46
TPM4-207ENST00000588032 COX7BP24311 80 aa5.89□□□□□ -1.47
TPM4-207ENST00000588032 C6orf99Q4VX62 202 aa5.89□□□□□ -1.47
TPM4-207ENST00000588032 C3orf22Q8N5N4 141 aa5.89□□□□□ -1.47
TPM4-207ENST00000588032 UBR4Q5T4S7 5183 aa5.88□□□□□ -1.47
TPM4-207ENST00000588032 ELOF1P60002 83 aaKnown RBP5.88□□□□□ -1.47
TPM4-207ENST00000588032 SSBP3-AS1Q7Z2R9 100 aa5.88□□□□□ -1.47
TPM4-207ENST00000588032 A0A1B0GWB2 263 aa5.87□□□□□ -1.47
TPM4-207ENST00000588032 A4D1N5 150 aa5.87□□□□□ -1.47
TPM4-207ENST00000588032 SLC25A34Q6PIV7 304 aa5.87□□□□□ -1.47
TPM4-207ENST00000588032 VAMP8Q9BV40 100 aa5.87□□□□□ -1.47
TPM4-207ENST00000588032 PRR4Q16378 134 aa5.86□□□□□ -1.47
TPM4-207ENST00000588032 SPATA45Q537H7 98 aa5.86□□□□□ -1.47
TPM4-207ENST00000588032 HIST1H4GQ99525 98 aa5.86□□□□□ -1.47
TPM4-207ENST00000588032 HMCN2Q8NDA2 5059 aa5.85□□□□□ -1.47
TPM4-207ENST00000588032 SPRR1BP22528 89 aa5.85□□□□□ -1.47
TPM4-207ENST00000588032 HIGD1BQ9P298 99 aa5.85□□□□□ -1.47
TPM4-207ENST00000588032 PAM16Q9Y3D7 125 aa5.85□□□□□ -1.47
TPM4-207ENST00000588032 IGLV9-49A0A0B4J1Y8 123 aa5.84□□□□□ -1.47
TPM4-207ENST00000588032 SPINK1P00995 79 aa5.84□□□□□ -1.47
TPM4-207ENST00000588032 VAMP3Q15836 100 aa5.84□□□□□ -1.47
TPM4-207ENST00000588032 ST20-AS1Q8NBB2 130 aa5.84□□□□□ -1.47
TPM4-207ENST00000588032 Q8NBF4 154 aa5.84□□□□□ -1.47
TPM4-207ENST00000588032 SMIM11BQ8TCY0 68 aa5.84□□□□□ -1.47
TPM4-207ENST00000588032 C14orf144Q96I85 54 aa5.84□□□□□ -1.47
TPM4-207ENST00000588032 NHP2Q9NX24 153 aaKnown RBP5.84□□□□□ -1.47
TPM4-207ENST00000588032 MOBPQ13875 183 aa5.83□□□□□ -1.48
TPM4-207ENST00000588032 TAL2Q16559 108 aa5.83□□□□□ -1.48
TPM4-207ENST00000588032 RPS29P62273 56 aaKnown RBP5.82□□□□□ -1.48
TPM4-207ENST00000588032 LAMTOR3Q9UHA4 124 aa5.82□□□□□ -1.48
TPM4-207ENST00000588032 TEX49A0A1B0GTD5 131 aa5.81□□□□□ -1.48
TPM4-207ENST00000588032 SLC25A20O43772 301 aa5.81□□□□□ -1.48
TPM4-207ENST00000588032 PYY3Q5JQD4 70 aa5.8□□□□□ -1.48
TPM4-207ENST00000588032 C9orf153Q5TBE3 101 aa5.8□□□□□ -1.48
TPM4-207ENST00000588032 TMA7Q9Y2S6 64 aaKnown RBP5.8□□□□□ -1.48
TPM4-207ENST00000588032 BVES-AS1Q5T3Y7 98 aa5.79□□□□□ -1.48
TPM4-207ENST00000588032 DEFB105AQ8NG35 78 aa5.79□□□□□ -1.48
TPM4-207ENST00000588032 KRTAP4-11Q9BYQ6 195 aa5.79□□□□□ -1.48
TPM4-207ENST00000588032 IGLV5-48A0A075B6I7 105 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 180.9 ms