RNA–Protein interactions for RNA: ENST00000586486.1

PRKCSH-203, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 1 (best)

Gene PRKCSH, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-203ENST00000586486 TRAV23DV6A0A075B6W5 121 aa10.45□□□□□ -0.74
PRKCSH-203ENST00000586486 M0R143 59 aa10.45□□□□□ -0.74
PRKCSH-203ENST00000586486 PLA2G1BP04054 148 aaKnown RBP10.45□□□□□ -0.74
PRKCSH-203ENST00000586486 KRTAP17-1Q9BYP8 105 aa10.45□□□□□ -0.74
PRKCSH-203ENST00000586486 VPS13BQ7Z7G8 4022 aa10.44□□□□□ -0.74
PRKCSH-203ENST00000586486 BCE1O60756 84 aa10.44□□□□□ -0.74
PRKCSH-203ENST00000586486 C1orf137Q5JT78 98 aa10.44□□□□□ -0.74
PRKCSH-203ENST00000586486 BVES-AS1Q5T3Y7 98 aa10.44□□□□□ -0.74
PRKCSH-203ENST00000586486 A0A1B0GWB2 263 aa10.43□□□□□ -0.74
PRKCSH-203ENST00000586486 RAB37Q96AX2 223 aa10.43□□□□□ -0.74
PRKCSH-203ENST00000586486 KRTAP4-16G5E9R7 235 aaPredicted RBP10.42□□□□□ -0.74
PRKCSH-203ENST00000586486 RPL13AP40429 203 aaKnown RBP10.42□□□□□ -0.74
PRKCSH-203ENST00000586486 NHP2Q9NX24 153 aaKnown RBP10.42□□□□□ -0.74
PRKCSH-203ENST00000586486 ZNF73O43830 326 aaPredicted RBP10.41□□□□□ -0.74
PRKCSH-203ENST00000586486 HINT1P49773 126 aaPredicted RBP10.41□□□□□ -0.74
PRKCSH-203ENST00000586486 IGLV7-43P04211 117 aa10.4□□□□□ -0.74
PRKCSH-203ENST00000586486 PRO1854Q9UHT4 67 aa10.4□□□□□ -0.74
PRKCSH-203ENST00000586486 HERC2O95714 4834 aa10.39□□□□□ -0.75
PRKCSH-203ENST00000586486 KRTAP13-1Q8IUC0 172 aa10.39□□□□□ -0.75
PRKCSH-203ENST00000586486 SMIM11BQ8TCY0 68 aa10.39□□□□□ -0.75
PRKCSH-203ENST00000586486 DIRC1Q969H9 104 aa10.39□□□□□ -0.75
PRKCSH-203ENST00000586486 ETDCA0A1B0GVM5 59 aa10.38□□□□□ -0.75
PRKCSH-203ENST00000586486 H0Y9J4 135 aa10.37□□□□□ -0.75
PRKCSH-203ENST00000586486 FAM19A1Q7Z5A9 133 aa10.37□□□□□ -0.75
PRKCSH-203ENST00000586486 K7ERJ3 54 aa10.36□□□□□ -0.75
PRKCSH-203ENST00000586486 C6orf99Q4VX62 202 aa10.36□□□□□ -0.75
PRKCSH-203ENST00000586486 TRBV7-6A0A0J9YX20 115 aa10.36□□□□□ -0.75
PRKCSH-203ENST00000586486 B5MCH6 92 aa10.36□□□□□ -0.75
PRKCSH-203ENST00000586486 ZNF861PO60384 105 aa10.36□□□□□ -0.75
PRKCSH-203ENST00000586486 RPL28P46779 137 aaKnown RBP10.36□□□□□ -0.75
PRKCSH-203ENST00000586486 UBE2AP49459 152 aa10.36□□□□□ -0.75
PRKCSH-203ENST00000586486 SRRM2Q9UQ35 2752 aaKnown RBP10.35□□□□□ -0.75
PRKCSH-203ENST00000586486 PRLHP81277 87 aa10.35□□□□□ -0.75
PRKCSH-203ENST00000586486 Q6ZRX8 168 aa10.35□□□□□ -0.75
PRKCSH-203ENST00000586486 H7C2G1 150 aa10.33□□□□□ -0.76
PRKCSH-203ENST00000586486 ELOF1P60002 83 aaKnown RBP10.33□□□□□ -0.76
PRKCSH-203ENST00000586486 Q1RN00 199 aa10.32□□□□□ -0.76
PRKCSH-203ENST00000586486 SPINK6Q6UWN8 80 aa10.32□□□□□ -0.76
PRKCSH-203ENST00000586486 COX7BP24311 80 aa10.31□□□□□ -0.76
PRKCSH-203ENST00000586486 PCP4L1A6NKN8 68 aa10.3□□□□□ -0.76
PRKCSH-203ENST00000586486 BATFQ16520 125 aa10.3□□□□□ -0.76
PRKCSH-203ENST00000586486 TSPAN13O95857 204 aa10.29□□□□□ -0.76
PRKCSH-203ENST00000586486 VAMP3Q15836 100 aa10.29□□□□□ -0.76
PRKCSH-203ENST00000586486 Q9BRP9 147 aa10.29□□□□□ -0.76
PRKCSH-203ENST00000586486 KRTAP4-5Q9BYR2 181 aa10.29□□□□□ -0.76
PRKCSH-203ENST00000586486 SMCR5Q8TEV8 140 aa10.29□□□□□ -0.76
PRKCSH-203ENST00000586486 HIGD2AQ9BW72 106 aa10.29□□□□□ -0.76
PRKCSH-203ENST00000586486 SNHG12Q9BXW3 62 aa10.27□□□□□ -0.77
PRKCSH-203ENST00000586486 DHRS4-AS1Q9P1J3 65 aa10.27□□□□□ -0.77
PRKCSH-203ENST00000586486 INAFM2P0DMQ5 153 aa10.26□□□□□ -0.77
PRKCSH-203ENST00000586486 TRIAP1O43715 76 aa10.25□□□□□ -0.77
PRKCSH-203ENST00000586486 PKHD1L1Q86WI1 4243 aa10.25□□□□□ -0.77
PRKCSH-203ENST00000586486 H0YGX0 51 aa10.24□□□□□ -0.77
PRKCSH-203ENST00000586486 ERC2-IT1O76042 136 aa10.22□□□□□ -0.77
PRKCSH-203ENST00000586486 PSMB2P49721 201 aa10.22□□□□□ -0.77
PRKCSH-203ENST00000586486 LINC00575Q6W349 94 aa10.22□□□□□ -0.77
PRKCSH-203ENST00000586486 COX6CP09669 75 aa10.22□□□□□ -0.77
PRKCSH-203ENST00000586486 SLC25A20O43772 301 aa10.21□□□□□ -0.78
PRKCSH-203ENST00000586486 SMCPP49901 116 aaPredicted RBP10.21□□□□□ -0.78
PRKCSH-203ENST00000586486 ZNF706Q9Y5V0 76 aaPredicted RBP10.21□□□□□ -0.78
PRKCSH-203ENST00000586486 TAX1BP3O14907 124 aa10.18□□□□□ -0.78
PRKCSH-203ENST00000586486 COL5A1-AS1Q5SY13 56 aa10.18□□□□□ -0.78
PRKCSH-203ENST00000586486 hADV29S1A0JD25 119 aa10.18□□□□□ -0.78
PRKCSH-203ENST00000586486 KRTAP1-4P0C5Y4 121 aa10.18□□□□□ -0.78
PRKCSH-203ENST00000586486 SPRR4Q96PI1 79 aa10.18□□□□□ -0.78
PRKCSH-203ENST00000586486 A0A1B0GX51 115 aa10.17□□□□□ -0.78
PRKCSH-203ENST00000586486 FAM218AQ96MZ4 157 aa10.17□□□□□ -0.78
PRKCSH-203ENST00000586486 ABCA13Q86UQ4 5058 aa10.16□□□□□ -0.78
PRKCSH-203ENST00000586486 C9orf118A6NHY6 69 aa10.15□□□□□ -0.78
PRKCSH-203ENST00000586486 CLEC2BQ92478 149 aa10.15□□□□□ -0.78
PRKCSH-203ENST00000586486 NAA38Q9BRA0 125 aaKnown RBP10.15□□□□□ -0.78
PRKCSH-203ENST00000586486 SNCGO76070 127 aa10.15□□□□□ -0.79
PRKCSH-203ENST00000586486 ST20-AS1Q8NBB2 130 aa10.15□□□□□ -0.79
PRKCSH-203ENST00000586486 H3BUT2 72 aa10.14□□□□□ -0.79
PRKCSH-203ENST00000586486 SCGB1C2P0DMR2 95 aa10.14□□□□□ -0.79
PRKCSH-203ENST00000586486 LINC00483Q53H64 154 aa10.14□□□□□ -0.79
PRKCSH-203ENST00000586486 LYRM7Q5U5X0 104 aa10.14□□□□□ -0.79
PRKCSH-203ENST00000586486 FLG2Q5D862 2391 aaPredicted RBP10.13□□□□□ -0.79
PRKCSH-203ENST00000586486 IGLV5-48A0A075B6I7 105 aa10.13□□□□□ -0.79
PRKCSH-203ENST00000586486 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.13□□□□□ -0.79
PRKCSH-203ENST00000586486 FAM229BQ4G0N7 80 aa10.12□□□□□ -0.79
PRKCSH-203ENST00000586486 Q6ZQY7 126 aa10.12□□□□□ -0.79
PRKCSH-203ENST00000586486 SPRR1BP22528 89 aa10.11□□□□□ -0.79
PRKCSH-203ENST00000586486 LST1O00453 97 aa10.11□□□□□ -0.79
PRKCSH-203ENST00000586486 LINC01547P58512 204 aaPredicted RBP10.11□□□□□ -0.79
PRKCSH-203ENST00000586486 GAGE2AQ6NT46 116 aa10.11□□□□□ -0.79
PRKCSH-203ENST00000586486 LINC01600Q96MT4 127 aa10.11□□□□□ -0.79
PRKCSH-203ENST00000586486 MYCBP2O75592 4640 aa10.09□□□□□ -0.79
PRKCSH-203ENST00000586486 A0A1W2PPM0 123 aa10.09□□□□□ -0.79
PRKCSH-203ENST00000586486 TEX49A0A1B0GTD5 131 aa10.08□□□□□ -0.8
PRKCSH-203ENST00000586486 OXTP01178 125 aa10.08□□□□□ -0.8
PRKCSH-203ENST00000586486 TRACP01848 142 aa10.08□□□□□ -0.8
PRKCSH-203ENST00000586486 OCIAD2Q56VL3 154 aa10.08□□□□□ -0.8
PRKCSH-203ENST00000586486 ANAPC11Q9NYG5 84 aa10.08□□□□□ -0.8
PRKCSH-203ENST00000586486 LRP1Q07954 4544 aaKnown RBP10.08□□□□□ -0.8
PRKCSH-203ENST00000586486 FAT3Q8TDW7 4589 aa10.07□□□□□ -0.8
PRKCSH-203ENST00000586486 TRBV20-1A0A075B6N2 111 aa10.07□□□□□ -0.8
PRKCSH-203ENST00000586486 A0A087X002 238 aa10.07□□□□□ -0.8
PRKCSH-203ENST00000586486 TCL1BO95988 128 aa10.07□□□□□ -0.8
PRKCSH-203ENST00000586486 DNAL4O96015 105 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms