RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 Q6ZRP5 223 aa9.35□□□□□ -0.91
CDK5RAP3-237ENST00000585163 KRTAP10-11P60412 298 aa9.34□□□□□ -0.91
CDK5RAP3-237ENST00000585163 PKD1L1Q8TDX9 2849 aa9.34□□□□□ -0.91
CDK5RAP3-237ENST00000585163 CD164Q04900 197 aa9.34□□□□□ -0.91
CDK5RAP3-237ENST00000585163 LINC01556Q5JQF7 62 aa9.34□□□□□ -0.91
CDK5RAP3-237ENST00000585163 TRAV7A0A075B6U4 112 aa9.33□□□□□ -0.92
CDK5RAP3-237ENST00000585163 C20orf197Q8N268 126 aa9.33□□□□□ -0.92
CDK5RAP3-237ENST00000585163 PMAIP1Q13794 54 aa9.32□□□□□ -0.92
CDK5RAP3-237ENST00000585163 BRK1Q8WUW1 75 aa9.32□□□□□ -0.92
CDK5RAP3-237ENST00000585163 IGKV2D-24A0A075B6R9 120 aa9.32□□□□□ -0.92
CDK5RAP3-237ENST00000585163 TRAV10A0A0B4J240 114 aa9.31□□□□□ -0.92
CDK5RAP3-237ENST00000585163 SYCNQ0VAF6 134 aa9.31□□□□□ -0.92
CDK5RAP3-237ENST00000585163 SERP1Q9Y6X1 66 aa9.3□□□□□ -0.92
CDK5RAP3-237ENST00000585163 ANK2Q01484 3957 aa9.29□□□□□ -0.92
CDK5RAP3-237ENST00000585163 KCNQ1DNQ9H478 68 aa9.29□□□□□ -0.92
CDK5RAP3-237ENST00000585163 DEFB131BA0A096LNP1 70 aa9.28□□□□□ -0.92
CDK5RAP3-237ENST00000585163 SCXQ7RTU7 201 aa9.28□□□□□ -0.92
CDK5RAP3-237ENST00000585163 SMIM26A0A096LP01 95 aa9.26□□□□□ -0.93
CDK5RAP3-237ENST00000585163 KLKP1Q107X0 134 aa9.26□□□□□ -0.93
CDK5RAP3-237ENST00000585163 SERTAD4-AS1Q5TG53 156 aa9.26□□□□□ -0.93
CDK5RAP3-237ENST00000585163 NKAPP1Q8N9T2 125 aa9.26□□□□□ -0.93
CDK5RAP3-237ENST00000585163 TENM3Q9P273 2699 aa9.26□□□□□ -0.93
CDK5RAP3-237ENST00000585163 C11orf45Q8TAV5 145 aa9.26□□□□□ -0.93
CDK5RAP3-237ENST00000585163 H7BZZ5 65 aa9.25□□□□□ -0.93
CDK5RAP3-237ENST00000585163 DNAH10OSP0CZ25 163 aa9.25□□□□□ -0.93
CDK5RAP3-237ENST00000585163 C7orf33Q8WU49 177 aa9.25□□□□□ -0.93
CDK5RAP3-237ENST00000585163 TLX1NBP0CAT3 122 aa9.24□□□□□ -0.93
CDK5RAP3-237ENST00000585163 Q8N377 158 aa9.23□□□□□ -0.93
CDK5RAP3-237ENST00000585163 PLA2G2DQ9UNK4 145 aa9.23□□□□□ -0.93
CDK5RAP3-237ENST00000585163 FLNBO75369 2602 aaKnown RBP9.22□□□□□ -0.93
CDK5RAP3-237ENST00000585163 FP248Q71RG6 208 aaPredicted RBP9.22□□□□□ -0.93
CDK5RAP3-237ENST00000585163 TM2D3Q9BRN9 247 aa9.22□□□□□ -0.93
CDK5RAP3-237ENST00000585163 BAHCC1Q9P281 2608 aa9.21□□□□□ -0.93
CDK5RAP3-237ENST00000585163 IGLV5-48A0A075B6I7 105 aa9.21□□□□□ -0.94
CDK5RAP3-237ENST00000585163 NREPQ16612 68 aa9.21□□□□□ -0.94
CDK5RAP3-237ENST00000585163 DEFB105AQ8NG35 78 aa9.21□□□□□ -0.94
CDK5RAP3-237ENST00000585163 Q6ZRX8 168 aa9.2□□□□□ -0.94
CDK5RAP3-237ENST00000585163 DHRS4-AS1Q9P1J3 65 aa9.2□□□□□ -0.94
CDK5RAP3-237ENST00000585163 SNURFQ9Y675 71 aa9.2□□□□□ -0.94
CDK5RAP3-237ENST00000585163 KRTAP4-16G5E9R7 235 aaPredicted RBP9.19□□□□□ -0.94
CDK5RAP3-237ENST00000585163 CMYA5Q8N3K9 4069 aa9.19□□□□□ -0.94
CDK5RAP3-237ENST00000585163 BPY2O14599 106 aa9.19□□□□□ -0.94
CDK5RAP3-237ENST00000585163 IGKV4-1P06312 121 aa9.19□□□□□ -0.94
CDK5RAP3-237ENST00000585163 RMI2Q96E14 147 aa9.19□□□□□ -0.94
CDK5RAP3-237ENST00000585163 IGLV5-37A0A075B6J1 123 aa9.18□□□□□ -0.94
CDK5RAP3-237ENST00000585163 Q8N9L7 120 aa9.18□□□□□ -0.94
CDK5RAP3-237ENST00000585163 IGLV1-50A0A075B6I6 118 aa9.17□□□□□ -0.94
CDK5RAP3-237ENST00000585163 C3orf84H3BNL1 204 aa9.17□□□□□ -0.94
CDK5RAP3-237ENST00000585163 FAM168BA1KXE4 195 aa9.17□□□□□ -0.94
CDK5RAP3-237ENST00000585163 RPL37AP8A6NKH3 93 aa9.17□□□□□ -0.94
CDK5RAP3-237ENST00000585163 SPRR1AP35321 89 aa9.17□□□□□ -0.94
CDK5RAP3-237ENST00000585163 Q9BRP9 147 aa9.17□□□□□ -0.94
CDK5RAP3-237ENST00000585163 PRYO14603 147 aa9.16□□□□□ -0.94
CDK5RAP3-237ENST00000585163 LINC00588Q9Y4M8 146 aa9.16□□□□□ -0.94
CDK5RAP3-237ENST00000585163 KRTAP24-1Q3LI83 254 aa9.15□□□□□ -0.94
CDK5RAP3-237ENST00000585163 CASC10Q5T4H9 136 aa9.15□□□□□ -0.94
CDK5RAP3-237ENST00000585163 A0A1B0GW54 56 aa9.15□□□□□ -0.94
CDK5RAP3-237ENST00000585163 F8WEM9 126 aa9.14□□□□□ -0.95
CDK5RAP3-237ENST00000585163 KRTAP7-1Q8IUC3 87 aa9.14□□□□□ -0.95
CDK5RAP3-237ENST00000585163 DNAH3Q8TD57 4116 aa9.14□□□□□ -0.95
CDK5RAP3-237ENST00000585163 NDUFC1O43677 76 aa9.14□□□□□ -0.95
CDK5RAP3-237ENST00000585163 ETDCA0A1B0GVM5 59 aa9.13□□□□□ -0.95
CDK5RAP3-237ENST00000585163 ERC2-IT1O76042 136 aa9.13□□□□□ -0.95
CDK5RAP3-237ENST00000585163 FUSP35637 526 aaKnown RBP eCLIP9.13□□□□□ -0.95
CDK5RAP3-237ENST00000585163 TNP2Q05952 138 aa9.13□□□□□ -0.95
CDK5RAP3-237ENST00000585163 PRR15Q8IV56 129 aa9.13□□□□□ -0.95
CDK5RAP3-237ENST00000585163 DNAH1Q9P2D7 4330 aa9.13□□□□□ -0.95
CDK5RAP3-237ENST00000585163 MRPL55Q7Z7F7 128 aaKnown RBP9.12□□□□□ -0.95
CDK5RAP3-237ENST00000585163 A0A1W2PNM2 257 aa9.12□□□□□ -0.95
CDK5RAP3-237ENST00000585163 OCR1Q9BZK8 76 aa9.12□□□□□ -0.95
CDK5RAP3-237ENST00000585163 TMEM254Q8TBM7 123 aa9.11□□□□□ -0.95
CDK5RAP3-237ENST00000585163 FBN1P35555 2871 aaKnown RBP9.11□□□□□ -0.95
CDK5RAP3-237ENST00000585163 ST20-AS1Q8NBB2 130 aa9.11□□□□□ -0.95
CDK5RAP3-237ENST00000585163 STAB1Q9NY15 2570 aa9.11□□□□□ -0.95
CDK5RAP3-237ENST00000585163 C1orf137Q5JT78 98 aa9.1□□□□□ -0.95
CDK5RAP3-237ENST00000585163 F8P00451 2351 aa9.1□□□□□ -0.95
CDK5RAP3-237ENST00000585163 Q8NBF4 154 aa9.08□□□□□ -0.96
CDK5RAP3-237ENST00000585163 SPRR4Q96PI1 79 aa9.07□□□□□ -0.96
CDK5RAP3-237ENST00000585163 ATP5EP56381 51 aaPredicted RBP9.06□□□□□ -0.96
CDK5RAP3-237ENST00000585163 MAST4O15021 2626 aa9.05□□□□□ -0.96
CDK5RAP3-237ENST00000585163 UBE2BP63146 152 aa9.05□□□□□ -0.96
CDK5RAP3-237ENST00000585163 LINC00474Q9P2X8 69 aa9.05□□□□□ -0.96
CDK5RAP3-237ENST00000585163 NOTCH1P46531 2555 aa9.04□□□□□ -0.96
CDK5RAP3-237ENST00000585163 REG3GQ6UW15 175 aa9.04□□□□□ -0.96
CDK5RAP3-237ENST00000585163 SMIM29Q86T20 159 aa9.02□□□□□ -0.96
CDK5RAP3-237ENST00000585163 PRB2P02812 416 aaPredicted RBP9.02□□□□□ -0.97
CDK5RAP3-237ENST00000585163 H3BS24 57 aa9□□□□□ -0.97
CDK5RAP3-237ENST00000585163 DSCR10P59022 87 aa9□□□□□ -0.97
CDK5RAP3-237ENST00000585163 HUWE1Q7Z6Z7 4374 aaKnown RBP9□□□□□ -0.97
CDK5RAP3-237ENST00000585163 LINC00476Q8WZB0 136 aa8.99□□□□□ -0.97
CDK5RAP3-237ENST00000585163 RBM12B-AS1Q9P1G2 102 aa8.99□□□□□ -0.97
CDK5RAP3-237ENST00000585163 HIGD2AQ9BW72 106 aa8.98□□□□□ -0.97
CDK5RAP3-237ENST00000585163 LCE6AA0A183 80 aa8.97□□□□□ -0.97
CDK5RAP3-237ENST00000585163 FAM30AQ9NZY2 134 aa8.97□□□□□ -0.97
CDK5RAP3-237ENST00000585163 A0A096LNI7 61 aa8.97□□□□□ -0.97
CDK5RAP3-237ENST00000585163 C16orf90A8MZG2 172 aa8.97□□□□□ -0.97
CDK5RAP3-237ENST00000585163 K7EIL1 84 aa8.96□□□□□ -0.97
CDK5RAP3-237ENST00000585163 K7EQZ3 153 aa8.96□□□□□ -0.97
CDK5RAP3-237ENST00000585163 NBEAL1Q6ZS30 2694 aa8.96□□□□□ -0.98
CDK5RAP3-237ENST00000585163 CNBPP62633 177 aaKnown RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 302.7 ms