RNA–Protein interactions for RNA: ENST00000580027.1

LLGL2-215, Transcript of LLGL2, scribble cell polarity complex component, human

TSL 2

Gene LLGL2, Length 1,875 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LLGL2-215	ENST00000580027	DNAH7	Q8WXX0	4024 aa		10.65	□□□□□ -0.71
LLGL2-215	ENST00000580027	IGLV5-37	A0A075B6J1	123 aa		10.64	□□□□□ -0.71
LLGL2-215	ENST00000580027	CSMD3	Q7Z407	3707 aa		10.63	□□□□□ -0.71
LLGL2-215	ENST00000580027	LOC110117498	A0A087WWA1	95 aa		10.63	□□□□□ -0.71
LLGL2-215	ENST00000580027	UBE2DNL	Q8IWF7	75 aa		10.63	□□□□□ -0.71
LLGL2-215	ENST00000580027		Q6JHZ5	121 aa		10.62	□□□□□ -0.71
LLGL2-215	ENST00000580027	KRTAP1-5	Q9BYS1	174 aa		10.62	□□□□□ -0.71
LLGL2-215	ENST00000580027	TENM2	Q9NT68	2774 aa		10.61	□□□□□ -0.71
LLGL2-215	ENST00000580027	LOC107984640	A0A0U1RRK4	108 aa		10.61	□□□□□ -0.71
LLGL2-215	ENST00000580027		Q6ZQT0	140 aa		10.61	□□□□□ -0.71
LLGL2-215	ENST00000580027	FAM168B	A1KXE4	195 aa		10.59	□□□□□ -0.71
LLGL2-215	ENST00000580027	DSCR8	Q96T75	97 aa		10.59	□□□□□ -0.71
LLGL2-215	ENST00000580027	PDE6G	P18545	87 aa		10.58	□□□□□ -0.72
LLGL2-215	ENST00000580027	FAM236A	A0A1B0GUQ0	79 aa		10.57	□□□□□ -0.72
LLGL2-215	ENST00000580027	FAM236B	A0A1B0GV22	79 aa		10.57	□□□□□ -0.72
LLGL2-215	ENST00000580027	IGLV1-50	A0A075B6I6	118 aa		10.57	□□□□□ -0.72
LLGL2-215	ENST00000580027	PRY	O14603	147 aa		10.57	□□□□□ -0.72
LLGL2-215	ENST00000580027	KRTAP7-1	Q8IUC3	87 aa		10.57	□□□□□ -0.72
LLGL2-215	ENST00000580027	IGKV3D-7	A0A0C4DH55	119 aa		10.56	□□□□□ -0.72
LLGL2-215	ENST00000580027	PSCA	O43653	123 aa		10.55	□□□□□ -0.72
LLGL2-215	ENST00000580027	STARD9	Q9P2P6	4700 aa		10.55	□□□□□ -0.72
LLGL2-215	ENST00000580027	RPL37AP8	A6NKH3	93 aa		10.55	□□□□□ -0.72
LLGL2-215	ENST00000580027	SPRR1A	P35321	89 aa		10.54	□□□□□ -0.72
LLGL2-215	ENST00000580027	CNBP	P62633	177 aa	Known RBP	10.54	□□□□□ -0.72
LLGL2-215	ENST00000580027	NUPR2	A6NF83	97 aa		10.53	□□□□□ -0.72
LLGL2-215	ENST00000580027	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	10.53	□□□□□ -0.72
LLGL2-215	ENST00000580027	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	10.53	□□□□□ -0.72
LLGL2-215	ENST00000580027	MRPL55	Q7Z7F7	128 aa	Known RBP	10.53	□□□□□ -0.72
LLGL2-215	ENST00000580027	UBL5	Q9BZL1	73 aa		10.53	□□□□□ -0.72
LLGL2-215	ENST00000580027	DYNC2H1	Q8NCM8	4307 aa	Known RBP	10.53	□□□□□ -0.72
LLGL2-215	ENST00000580027	TRBV7-4	A0A0J9YYF1	115 aa		10.53	□□□□□ -0.72
LLGL2-215	ENST00000580027	ATP5EP2	Q5VTU8	51 aa		10.53	□□□□□ -0.72
LLGL2-215	ENST00000580027	DHRS4-AS1	Q9P1J3	65 aa		10.53	□□□□□ -0.72
LLGL2-215	ENST00000580027		Q6ZRX8	168 aa		10.52	□□□□□ -0.73
LLGL2-215	ENST00000580027	PLEC	Q15149	4684 aa	Known RBP	10.52	□□□□□ -0.73
LLGL2-215	ENST00000580027	UQCRQ	O14949	82 aa		10.51	□□□□□ -0.73
LLGL2-215	ENST00000580027	SMIM20	Q8N5G0	67 aa		10.51	□□□□□ -0.73
LLGL2-215	ENST00000580027	ETDC	A0A1B0GVM5	59 aa		10.51	□□□□□ -0.73
LLGL2-215	ENST00000580027		M0R2N4	97 aa		10.51	□□□□□ -0.73
LLGL2-215	ENST00000580027	C14orf177	Q52M58	125 aa		10.51	□□□□□ -0.73
LLGL2-215	ENST00000580027	C3orf22	Q8N5N4	141 aa		10.5	□□□□□ -0.73
LLGL2-215	ENST00000580027	C16orf90	A8MZG2	172 aa		10.49	□□□□□ -0.73
LLGL2-215	ENST00000580027	HIST1H4A	P62805	103 aa	Known RBP	10.49	□□□□□ -0.73
LLGL2-215	ENST00000580027		A0A096LNI7	61 aa		10.48	□□□□□ -0.73
LLGL2-215	ENST00000580027		Q9BRP9	147 aa		10.47	□□□□□ -0.73
LLGL2-215	ENST00000580027	NBDY	A0A0U1RRE5	68 aa		10.47	□□□□□ -0.73
LLGL2-215	ENST00000580027		Q8N377	158 aa		10.47	□□□□□ -0.73
LLGL2-215	ENST00000580027	WWC2-AS2	Q96NR7	200 aa		10.47	□□□□□ -0.73
LLGL2-215	ENST00000580027	C9orf153	Q5TBE3	101 aa		10.46	□□□□□ -0.74
LLGL2-215	ENST00000580027	DEFB105A	Q8NG35	78 aa		10.46	□□□□□ -0.74
LLGL2-215	ENST00000580027	LYST	Q99698	3801 aa		10.46	□□□□□ -0.74
LLGL2-215	ENST00000580027	ATOX1	O00244	68 aa		10.45	□□□□□ -0.74
LLGL2-215	ENST00000580027	LINC01547	P58512	204 aa	Predicted RBP	10.45	□□□□□ -0.74
LLGL2-215	ENST00000580027	REG3G	Q6UW15	175 aa		10.44	□□□□□ -0.74
LLGL2-215	ENST00000580027	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	10.44	□□□□□ -0.74
LLGL2-215	ENST00000580027		A0A087WVE0	104 aa		10.44	□□□□□ -0.74
LLGL2-215	ENST00000580027	IGKV2-24	A0A0C4DH68	120 aa		10.44	□□□□□ -0.74
LLGL2-215	ENST00000580027		Q6ZVQ6	151 aa		10.44	□□□□□ -0.74
LLGL2-215	ENST00000580027		A0A1W2PNN7	141 aa		10.42	□□□□□ -0.74
LLGL2-215	ENST00000580027	COX7C	P15954	63 aa		10.42	□□□□□ -0.74
LLGL2-215	ENST00000580027	LRCOL1	A6NCL2	159 aa		10.42	□□□□□ -0.74
LLGL2-215	ENST00000580027	DNAH10	Q8IVF4	4471 aa		10.41	□□□□□ -0.74
LLGL2-215	ENST00000580027	IGLV5-48	A0A075B6I7	105 aa		10.4	□□□□□ -0.74
LLGL2-215	ENST00000580027	CRYGA	P11844	174 aa		10.4	□□□□□ -0.75
LLGL2-215	ENST00000580027	UBE2B	P63146	152 aa		10.4	□□□□□ -0.75
LLGL2-215	ENST00000580027		Q6ZRN7	208 aa	Predicted RBP	10.39	□□□□□ -0.75
LLGL2-215	ENST00000580027	FAM19A1	Q7Z5A9	133 aa		10.39	□□□□□ -0.75
LLGL2-215	ENST00000580027	ST20-AS1	Q8NBB2	130 aa		10.39	□□□□□ -0.75
LLGL2-215	ENST00000580027	ERC2-IT1	O76042	136 aa		10.38	□□□□□ -0.75
LLGL2-215	ENST00000580027	HAMP	P81172	84 aa		10.38	□□□□□ -0.75
LLGL2-215	ENST00000580027	C9orf163	Q8N9P6	203 aa		10.38	□□□□□ -0.75
LLGL2-215	ENST00000580027	PKIG	Q9Y2B9	76 aa		10.38	□□□□□ -0.75
LLGL2-215	ENST00000580027	KMT2C	Q8NEZ4	4911 aa	Known RBP	10.38	□□□□□ -0.75
LLGL2-215	ENST00000580027	CXCL6	P80162	114 aa		10.37	□□□□□ -0.75
LLGL2-215	ENST00000580027		J3KT08	172 aa		10.35	□□□□□ -0.75
LLGL2-215	ENST00000580027	CHTF8	P0CG12	524 aa		10.35	□□□□□ -0.75
LLGL2-215	ENST00000580027	TNP2	Q05952	138 aa		10.35	□□□□□ -0.75
LLGL2-215	ENST00000580027	RPS28	P62857	69 aa	Known RBP	10.34	□□□□□ -0.75
LLGL2-215	ENST00000580027	SACS	Q9NZJ4	4579 aa		10.34	□□□□□ -0.75
LLGL2-215	ENST00000580027	VPS13D	Q5THJ4	4388 aa		10.33	□□□□□ -0.76
LLGL2-215	ENST00000580027	C3orf84	H3BNL1	204 aa		10.32	□□□□□ -0.76
LLGL2-215	ENST00000580027	PHF5A	Q7RTV0	110 aa	Known RBP	10.32	□□□□□ -0.76
LLGL2-215	ENST00000580027	LINC00474	Q9P2X8	69 aa		10.32	□□□□□ -0.76
LLGL2-215	ENST00000580027		A0A1B0GW54	56 aa		10.3	□□□□□ -0.76
LLGL2-215	ENST00000580027	TMEM258	P61165	79 aa		10.3	□□□□□ -0.76
LLGL2-215	ENST00000580027	PRLH	P81277	87 aa		10.3	□□□□□ -0.76
LLGL2-215	ENST00000580027	C1orf137	Q5JT78	98 aa		10.3	□□□□□ -0.76
LLGL2-215	ENST00000580027	SERP2	Q8N6R1	65 aa		10.3	□□□□□ -0.76
LLGL2-215	ENST00000580027	FUS	P35637	526 aa	Known RBP eCLIP	10.29	□□□□□ -0.76
LLGL2-215	ENST00000580027	NREP	Q16612	68 aa		10.29	□□□□□ -0.76
LLGL2-215	ENST00000580027	SMIM29	Q86T20	159 aa		10.29	□□□□□ -0.76
LLGL2-215	ENST00000580027		A0A1W2PNM2	257 aa		10.28	□□□□□ -0.76
LLGL2-215	ENST00000580027	KMT2A	Q03164	3969 aa		10.28	□□□□□ -0.76
LLGL2-215	ENST00000580027	KRTAP11-1	Q8IUC1	163 aa		10.27	□□□□□ -0.76
LLGL2-215	ENST00000580027	HYDIN	Q4G0P3	5121 aa		10.27	□□□□□ -0.77
LLGL2-215	ENST00000580027	SCX	Q7RTU7	201 aa		10.27	□□□□□ -0.77
LLGL2-215	ENST00000580027		H0Y9J4	135 aa		10.26	□□□□□ -0.77
LLGL2-215	ENST00000580027		A0A087WTM6	91 aa		10.25	□□□□□ -0.77
LLGL2-215	ENST00000580027		Q8NBF4	154 aa		10.25	□□□□□ -0.77
LLGL2-215	ENST00000580027	HIGD2A	Q9BW72	106 aa		10.25	□□□□□ -0.77

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