RNA–Protein interactions for RNA: ENST00000579211.1

ITGB4-205, Transcript of integrin subunit beta 4, humanhuman

TSL 2

Gene ITGB4, Length 411 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-205ENST00000579211 TRAV23DV6A0A075B6W5 121 aa10.33□□□□□ -0.76
ITGB4-205ENST00000579211 EIF4EBP3O60516 100 aaPredicted RBP10.33□□□□□ -0.76
ITGB4-205ENST00000579211 IGLV6-57P01721 117 aa10.33□□□□□ -0.76
ITGB4-205ENST00000579211 TSPAN13O95857 204 aa10.32□□□□□ -0.76
ITGB4-205ENST00000579211 HINT1P49773 126 aaPredicted RBP10.32□□□□□ -0.76
ITGB4-205ENST00000579211 B5MCH6 92 aa10.31□□□□□ -0.76
ITGB4-205ENST00000579211 KRTAP4-16G5E9R7 235 aaPredicted RBP10.31□□□□□ -0.76
ITGB4-205ENST00000579211 SPRR4Q96PI1 79 aa10.31□□□□□ -0.76
ITGB4-205ENST00000579211 JOSD1Q15040 202 aaPredicted RBP10.3□□□□□ -0.76
ITGB4-205ENST00000579211 PCP2Q8IVA1 136 aa10.3□□□□□ -0.76
ITGB4-205ENST00000579211 LINC00518Q8N0U6 118 aa10.3□□□□□ -0.76
ITGB4-205ENST00000579211 SPANXDQ9BXN6 97 aa10.3□□□□□ -0.76
ITGB4-205ENST00000579211 ZNF73O43830 326 aaPredicted RBP10.29□□□□□ -0.76
ITGB4-205ENST00000579211 SCGB1D1O95968 90 aa10.29□□□□□ -0.76
ITGB4-205ENST00000579211 KRTAP13-2Q52LG2 175 aa10.29□□□□□ -0.76
ITGB4-205ENST00000579211 PPDPFQ9H3Y8 114 aa10.28□□□□□ -0.76
ITGB4-205ENST00000579211 IFITM1P13164 125 aa10.27□□□□□ -0.77
ITGB4-205ENST00000579211 Q6ZRX8 168 aa10.27□□□□□ -0.77
ITGB4-205ENST00000579211 Q6ZVH6 145 aa10.27□□□□□ -0.77
ITGB4-205ENST00000579211 LINC00304Q8N9R0 145 aa10.27□□□□□ -0.77
ITGB4-205ENST00000579211 PRR4Q16378 134 aa10.26□□□□□ -0.77
ITGB4-205ENST00000579211 GAGE2AQ6NT46 116 aa10.26□□□□□ -0.77
ITGB4-205ENST00000579211 MUSTN1Q8IVN3 82 aa10.24□□□□□ -0.77
ITGB4-205ENST00000579211 C3orf22Q8N5N4 141 aa10.24□□□□□ -0.77
ITGB4-205ENST00000579211 C5orf52A6NGY3 159 aa10.23□□□□□ -0.77
ITGB4-205ENST00000579211 Q9BRP9 147 aa10.23□□□□□ -0.77
ITGB4-205ENST00000579211 A6NDN8 102 aa10.22□□□□□ -0.77
ITGB4-205ENST00000579211 ERC2-IT1O76042 136 aa10.22□□□□□ -0.77
ITGB4-205ENST00000579211 C4orf48Q5BLP8 95 aa10.22□□□□□ -0.77
ITGB4-205ENST00000579211 UBR4Q5T4S7 5183 aa10.19□□□□□ -0.78
ITGB4-205ENST00000579211 IGLV9-49A0A0B4J1Y8 123 aa10.18□□□□□ -0.78
ITGB4-205ENST00000579211 COX7BP24311 80 aa10.18□□□□□ -0.78
ITGB4-205ENST00000579211 C6orf99Q4VX62 202 aa10.17□□□□□ -0.78
ITGB4-205ENST00000579211 LINC00483Q53H64 154 aa10.17□□□□□ -0.78
ITGB4-205ENST00000579211 SPAG11AQ6PDA7 123 aa10.17□□□□□ -0.78
ITGB4-205ENST00000579211 DHRS4-AS1Q9P1J3 65 aa10.17□□□□□ -0.78
ITGB4-205ENST00000579211 TRAV13-2A0A0B4J235 113 aa10.15□□□□□ -0.78
ITGB4-205ENST00000579211 Q8NBF4 154 aa10.15□□□□□ -0.78
ITGB4-205ENST00000579211 LRP2P98164 4655 aa10.13□□□□□ -0.79
ITGB4-205ENST00000579211 ELOF1P60002 83 aaKnown RBP10.13□□□□□ -0.79
ITGB4-205ENST00000579211 MOBPQ13875 183 aa10.13□□□□□ -0.79
ITGB4-205ENST00000579211 C9orf153Q5TBE3 101 aa10.13□□□□□ -0.79
ITGB4-205ENST00000579211 ST20-AS1Q8NBB2 130 aa10.13□□□□□ -0.79
ITGB4-205ENST00000579211 CTAG1AP78358 180 aa10.12□□□□□ -0.79
ITGB4-205ENST00000579211 HIST1H4GQ99525 98 aa10.12□□□□□ -0.79
ITGB4-205ENST00000579211 RETNLBQ9BQ08 111 aa10.12□□□□□ -0.79
ITGB4-205ENST00000579211 COX8AP10176 69 aa10.11□□□□□ -0.79
ITGB4-205ENST00000579211 SSBP3-AS1Q7Z2R9 100 aa10.11□□□□□ -0.79
ITGB4-205ENST00000579211 TRBV7-6A0A0J9YX20 115 aa10.1□□□□□ -0.79
ITGB4-205ENST00000579211 A0A1B0GWB2 263 aa10.1□□□□□ -0.79
ITGB4-205ENST00000579211 TAL2Q16559 108 aa10.1□□□□□ -0.79
ITGB4-205ENST00000579211 SLC25A34Q6PIV7 304 aa10.1□□□□□ -0.79
ITGB4-205ENST00000579211 SPATA45Q537H7 98 aa10.09□□□□□ -0.79
ITGB4-205ENST00000579211 VAMP8Q9BV40 100 aa10.09□□□□□ -0.79
ITGB4-205ENST00000579211 PAM16Q9Y3D7 125 aa10.09□□□□□ -0.79
ITGB4-205ENST00000579211 A4D1N5 150 aa10.08□□□□□ -0.8
ITGB4-205ENST00000579211 VAMP3Q15836 100 aa10.08□□□□□ -0.8
ITGB4-205ENST00000579211 DEFB105AQ8NG35 78 aa10.08□□□□□ -0.8
ITGB4-205ENST00000579211 SPINK1P00995 79 aa10.07□□□□□ -0.8
ITGB4-205ENST00000579211 C14orf144Q96I85 54 aa10.07□□□□□ -0.8
ITGB4-205ENST00000579211 LAMTOR3Q9UHA4 124 aa10.07□□□□□ -0.8
ITGB4-205ENST00000579211 LPAP08519 4548 aa10.06□□□□□ -0.8
ITGB4-205ENST00000579211 SMIM11BQ8TCY0 68 aa10.06□□□□□ -0.8
ITGB4-205ENST00000579211 DLEU1O43261 78 aa10.05□□□□□ -0.8
ITGB4-205ENST00000579211 NHP2Q9NX24 153 aaKnown RBP10.05□□□□□ -0.8
ITGB4-205ENST00000579211 SLC25A20O43772 301 aa10.04□□□□□ -0.8
ITGB4-205ENST00000579211 C12orf57Q99622 126 aa10.03□□□□□ -0.8
ITGB4-205ENST00000579211 TMA7Q9Y2S6 64 aaKnown RBP10.03□□□□□ -0.8
ITGB4-205ENST00000579211 IGLV7-46A0A075B6I9 117 aa10.02□□□□□ -0.81
ITGB4-205ENST00000579211 TEX49A0A1B0GTD5 131 aa10.02□□□□□ -0.81
ITGB4-205ENST00000579211 SPRR1BP22528 89 aa10.02□□□□□ -0.81
ITGB4-205ENST00000579211 Q1RN00 199 aa10□□□□□ -0.81
ITGB4-205ENST00000579211 RAB37Q96AX2 223 aa9.99□□□□□ -0.81
ITGB4-205ENST00000579211 HIGD1BQ9P298 99 aa9.99□□□□□ -0.81
ITGB4-205ENST00000579211 CDIP1Q9H305 208 aa9.97□□□□□ -0.81
ITGB4-205ENST00000579211 H7C2G1 150 aa9.96□□□□□ -0.82
ITGB4-205ENST00000579211 RPS29P62273 56 aaKnown RBP9.96□□□□□ -0.82
ITGB4-205ENST00000579211 HRCT1Q6UXD1 115 aa9.96□□□□□ -0.82
ITGB4-205ENST00000579211 FP248Q71RG6 208 aaPredicted RBP9.96□□□□□ -0.82
ITGB4-205ENST00000579211 BVES-AS1Q5T3Y7 98 aa9.95□□□□□ -0.82
ITGB4-205ENST00000579211 hADV29S1A0JD25 119 aa9.94□□□□□ -0.82
ITGB4-205ENST00000579211 PRO1933Q9H354 126 aa9.94□□□□□ -0.82
ITGB4-205ENST00000579211 TPRXLQ17RH7 258 aa9.93□□□□□ -0.82
ITGB4-205ENST00000579211 LINC00575Q6W349 94 aa9.93□□□□□ -0.82
ITGB4-205ENST00000579211 IGLV5-48A0A075B6I7 105 aa9.92□□□□□ -0.82
ITGB4-205ENST00000579211 CFC1BP0CG36 223 aa9.92□□□□□ -0.82
ITGB4-205ENST00000579211 CFC1P0CG37 223 aa9.92□□□□□ -0.82
ITGB4-205ENST00000579211 PYY3Q5JQD4 70 aa9.92□□□□□ -0.82
ITGB4-205ENST00000579211 C2orf91Q6ZV80 131 aa9.92□□□□□ -0.82
ITGB4-205ENST00000579211 Q8N377 158 aa9.92□□□□□ -0.82
ITGB4-205ENST00000579211 RNF213Q63HN8 5207 aa9.92□□□□□ -0.82
ITGB4-205ENST00000579211 TMEM238LA0A1B0GVL6 79 aa9.91□□□□□ -0.82
ITGB4-205ENST00000579211 A6NJY4 79 aa9.91□□□□□ -0.82
ITGB4-205ENST00000579211 F8WEM9 126 aa9.91□□□□□ -0.82
ITGB4-205ENST00000579211 CEND1Q8N111 149 aa9.91□□□□□ -0.82
ITGB4-205ENST00000579211 LIMD2Q9BT23 127 aa9.91□□□□□ -0.82
ITGB4-205ENST00000579211 SNCGO76070 127 aa9.9□□□□□ -0.82
ITGB4-205ENST00000579211 LINC01547P58512 204 aaPredicted RBP9.9□□□□□ -0.82
ITGB4-205ENST00000579211 Q6ZQY7 126 aa9.89□□□□□ -0.83
ITGB4-205ENST00000579211 SMIM29Q86T20 159 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms