RNA–Protein interactions for RNA: ENST00000579040.5

SSH2-208, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-208ENST00000579040 RPS29P62273 56 aaKnown RBP6.55□□□□□ -1.36
SSH2-208ENST00000579040 MOBPQ13875 183 aa6.55□□□□□ -1.36
SSH2-208ENST00000579040 SOSTDC1Q6X4U4 206 aa6.55□□□□□ -1.36
SSH2-208ENST00000579040 SYS1-DBNDD2H3BUS1 97 aa6.54□□□□□ -1.36
SSH2-208ENST00000579040 LCE2BO14633 110 aa6.54□□□□□ -1.36
SSH2-208ENST00000579040 ZNF73O43830 326 aaPredicted RBP6.54□□□□□ -1.36
SSH2-208ENST00000579040 ADAMTSL4-AS1Q5T5F5 129 aa6.54□□□□□ -1.36
SSH2-208ENST00000579040 IGLV9-49A0A0B4J1Y8 123 aa6.53□□□□□ -1.36
SSH2-208ENST00000579040 C5orf52A6NGY3 159 aa6.53□□□□□ -1.36
SSH2-208ENST00000579040 EIF4EBP3O60516 100 aaPredicted RBP6.53□□□□□ -1.36
SSH2-208ENST00000579040 HIST1H2BKO60814 126 aa6.53□□□□□ -1.36
SSH2-208ENST00000579040 TIMM17BO60830 172 aa6.53□□□□□ -1.36
SSH2-208ENST00000579040 HIST1H2BJP06899 126 aa6.53□□□□□ -1.36
SSH2-208ENST00000579040 HIST1H2BOP23527 126 aa6.53□□□□□ -1.36
SSH2-208ENST00000579040 HIST1H2BBP33778 126 aa6.53□□□□□ -1.36
SSH2-208ENST00000579040 HIST1H2BDP58876 126 aa6.53□□□□□ -1.36
SSH2-208ENST00000579040 HIST1H2BCP62807 126 aa6.53□□□□□ -1.36
SSH2-208ENST00000579040 HIST2H2BEQ16778 126 aa6.53□□□□□ -1.36
SSH2-208ENST00000579040 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.53□□□□□ -1.36
SSH2-208ENST00000579040 HIST1H2BHQ93079 126 aa6.53□□□□□ -1.36
SSH2-208ENST00000579040 HIST1H2BNQ99877 126 aa6.53□□□□□ -1.36
SSH2-208ENST00000579040 HIST1H2BMQ99879 126 aa6.53□□□□□ -1.36
SSH2-208ENST00000579040 NPC2P61916 151 aa6.52□□□□□ -1.37
SSH2-208ENST00000579040 KRTAP13-3Q3SY46 172 aa6.52□□□□□ -1.37
SSH2-208ENST00000579040 LINC01545Q5VT33 79 aa6.52□□□□□ -1.37
SSH2-208ENST00000579040 SPANXCQ9NY87 97 aa6.52□□□□□ -1.37
SSH2-208ENST00000579040 HINT1P49773 126 aaPredicted RBP6.51□□□□□ -1.37
SSH2-208ENST00000579040 PET117Q6UWS5 81 aa6.51□□□□□ -1.37
SSH2-208ENST00000579040 LITAFQ99732 161 aa6.51□□□□□ -1.37
SSH2-208ENST00000579040 MUC2Q02817 5179 aa6.5□□□□□ -1.37
SSH2-208ENST00000579040 SLC25A20O43772 301 aa6.5□□□□□ -1.37
SSH2-208ENST00000579040 LCE2AQ5TA79 106 aaPredicted RBP6.5□□□□□ -1.37
SSH2-208ENST00000579040 Q8N377 158 aa6.5□□□□□ -1.37
SSH2-208ENST00000579040 LINC00308Q8TCZ7 52 aa6.5□□□□□ -1.37
SSH2-208ENST00000579040 ZNF815PA8K554 130 aa6.48□□□□□ -1.37
SSH2-208ENST00000579040 C9orf153Q5TBE3 101 aa6.48□□□□□ -1.37
SSH2-208ENST00000579040 SPANXDQ9BXN6 97 aa6.48□□□□□ -1.37
SSH2-208ENST00000579040 LOC105371267A0A1B0GV96 52 aa6.47□□□□□ -1.37
SSH2-208ENST00000579040 ASB16-AS1Q495Z4 193 aa6.47□□□□□ -1.37
SSH2-208ENST00000579040 LINC00518Q8N0U6 118 aa6.47□□□□□ -1.37
SSH2-208ENST00000579040 OR13C6PQ8NH95 151 aa6.47□□□□□ -1.37
SSH2-208ENST00000579040 DHRS4-AS1Q9P1J3 65 aa6.47□□□□□ -1.37
SSH2-208ENST00000579040 C3orf79P0CE67 100 aa6.46□□□□□ -1.38
SSH2-208ENST00000579040 SPRR1BP22528 89 aa6.46□□□□□ -1.38
SSH2-208ENST00000579040 SLC25A34Q6PIV7 304 aa6.46□□□□□ -1.38
SSH2-208ENST00000579040 ST20-AS1Q8NBB2 130 aa6.46□□□□□ -1.38
SSH2-208ENST00000579040 SEC61BP60468 96 aaKnown RBP6.45□□□□□ -1.38
SSH2-208ENST00000579040 COA6Q5JTJ3 125 aaKnown RBP6.45□□□□□ -1.38
SSH2-208ENST00000579040 COPS9Q8WXC6 57 aa6.44□□□□□ -1.38
SSH2-208ENST00000579040 TTTY13Q9BZ97 58 aa6.44□□□□□ -1.38
SSH2-208ENST00000579040 C20orf202A1L168 122 aa6.43□□□□□ -1.38
SSH2-208ENST00000579040 COX7BP24311 80 aa6.43□□□□□ -1.38
SSH2-208ENST00000579040 ELOF1P60002 83 aaKnown RBP6.43□□□□□ -1.38
SSH2-208ENST00000579040 KRTDAPP60985 99 aa6.43□□□□□ -1.38
SSH2-208ENST00000579040 TRBV7-6A0A0J9YX20 115 aa6.42□□□□□ -1.38
SSH2-208ENST00000579040 C6orf99Q4VX62 202 aa6.42□□□□□ -1.38
SSH2-208ENST00000579040 SCGB1D4Q6XE38 83 aa6.42□□□□□ -1.38
SSH2-208ENST00000579040 LIMD2Q9BT23 127 aa6.42□□□□□ -1.38
SSH2-208ENST00000579040 LAMTOR3Q9UHA4 124 aa6.42□□□□□ -1.38
SSH2-208ENST00000579040 IFITM1P13164 125 aa6.41□□□□□ -1.38
SSH2-208ENST00000579040 AKR1D1P51857 326 aa6.41□□□□□ -1.38
SSH2-208ENST00000579040 MUC17Q685J3 4493 aa6.4□□□□□ -1.38
SSH2-208ENST00000579040 SNRPEP62304 92 aaKnown RBP6.4□□□□□ -1.38
SSH2-208ENST00000579040 XP32Q5T750 250 aa6.4□□□□□ -1.38
SSH2-208ENST00000579040 Q6ZVH6 145 aa6.4□□□□□ -1.38
SSH2-208ENST00000579040 KRTAP9-2Q9BYQ4 174 aa6.4□□□□□ -1.38
SSH2-208ENST00000579040 TEX49A0A1B0GTD5 131 aa6.38□□□□□ -1.39
SSH2-208ENST00000579040 A0A1B0GWB2 263 aa6.38□□□□□ -1.39
SSH2-208ENST00000579040 CD164Q04900 197 aa6.38□□□□□ -1.39
SSH2-208ENST00000579040 TAL2Q16559 108 aa6.38□□□□□ -1.39
SSH2-208ENST00000579040 ANKRD39Q53RE8 183 aa6.38□□□□□ -1.39
SSH2-208ENST00000579040 FAT4Q6V0I7 4981 aa6.37□□□□□ -1.39
SSH2-208ENST00000579040 S100A6P06703 90 aa6.37□□□□□ -1.39
SSH2-208ENST00000579040 Q1RN00 199 aa6.36□□□□□ -1.39
SSH2-208ENST00000579040 HRCT1Q6UXD1 115 aa6.36□□□□□ -1.39
SSH2-208ENST00000579040 HIST3H2BBQ8N257 126 aa6.36□□□□□ -1.39
SSH2-208ENST00000579040 KRTAP4-1Q9BYQ7 146 aa6.36□□□□□ -1.39
SSH2-208ENST00000579040 PRO1933Q9H354 126 aa6.36□□□□□ -1.39
SSH2-208ENST00000579040 A4D1N5 150 aa6.35□□□□□ -1.39
SSH2-208ENST00000579040 A6NDN8 102 aa6.35□□□□□ -1.39
SSH2-208ENST00000579040 LINC01547P58512 204 aaPredicted RBP6.35□□□□□ -1.39
SSH2-208ENST00000579040 ATOH7Q8N100 152 aa6.35□□□□□ -1.39
SSH2-208ENST00000579040 DEFB105AQ8NG35 78 aa6.35□□□□□ -1.39
SSH2-208ENST00000579040 IGLV5-48A0A075B6I7 105 aa6.34□□□□□ -1.39
SSH2-208ENST00000579040 TRAV13-2A0A0B4J235 113 aa6.34□□□□□ -1.39
SSH2-208ENST00000579040 PCP2Q8IVA1 136 aa6.34□□□□□ -1.39
SSH2-208ENST00000579040 MUSTN1Q8IVN3 82 aa6.34□□□□□ -1.39
SSH2-208ENST00000579040 H7C2G1 150 aa6.33□□□□□ -1.4
SSH2-208ENST00000579040 Q5XG85 94 aa6.33□□□□□ -1.4
SSH2-208ENST00000579040 NHP2Q9NX24 153 aaKnown RBP6.33□□□□□ -1.4
SSH2-208ENST00000579040 SMIM29Q86T20 159 aa6.32□□□□□ -1.4
SSH2-208ENST00000579040 HIST1H2BLQ99880 126 aa6.32□□□□□ -1.4
SSH2-208ENST00000579040 SMIM11BQ8TCY0 68 aa6.3□□□□□ -1.4
SSH2-208ENST00000579040 KRTAP4-8Q9BYQ9 185 aa6.3□□□□□ -1.4
SSH2-208ENST00000579040 C9orf92A6NGG3 77 aa6.28□□□□□ -1.4
SSH2-208ENST00000579040 HSBP1L1C9JCN9 74 aa6.28□□□□□ -1.4
SSH2-208ENST00000579040 S100A2P29034 98 aa6.28□□□□□ -1.4
SSH2-208ENST00000579040 VAMP3Q15836 100 aa6.28□□□□□ -1.4
SSH2-208ENST00000579040 C1orf195Q5TG92 126 aa6.27□□□□□ -1.41
SSH2-208ENST00000579040 F8WEM9 126 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 118.9 ms