RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 ESRGQ1W209 222 aa9.18□□□□□ -0.94
NDEL1-204ENST00000578172 SERP1Q9Y6X1 66 aa9.18□□□□□ -0.94
NDEL1-204ENST00000578172 UBE2BP63146 152 aa9.18□□□□□ -0.94
NDEL1-204ENST00000578172 SPTSSBQ8NFR3 76 aa9.18□□□□□ -0.94
NDEL1-204ENST00000578172 C1orf195Q5TG92 126 aa9.17□□□□□ -0.94
NDEL1-204ENST00000578172 RPS28P62857 69 aaKnown RBP9.16□□□□□ -0.94
NDEL1-204ENST00000578172 V9GYY9 64 aa9.16□□□□□ -0.94
NDEL1-204ENST00000578172 LINC00474Q9P2X8 69 aa9.15□□□□□ -0.94
NDEL1-204ENST00000578172 COX17Q14061 63 aa9.15□□□□□ -0.94
NDEL1-204ENST00000578172 TRBV7-6A0A0J9YX20 115 aa9.15□□□□□ -0.95
NDEL1-204ENST00000578172 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.14□□□□□ -0.95
NDEL1-204ENST00000578172 A0A096LNI7 61 aa9.14□□□□□ -0.95
NDEL1-204ENST00000578172 PSPHP1O15172 72 aa9.14□□□□□ -0.95
NDEL1-204ENST00000578172 TM2D3Q9BRN9 247 aa9.14□□□□□ -0.95
NDEL1-204ENST00000578172 LINC00336Q6ZUF6 198 aa9.14□□□□□ -0.95
NDEL1-204ENST00000578172 C2orf48Q96LS8 159 aa9.14□□□□□ -0.95
NDEL1-204ENST00000578172 LINC00612Q8N6U2 182 aa9.14□□□□□ -0.95
NDEL1-204ENST00000578172 ETDCA0A1B0GVM5 59 aa9.13□□□□□ -0.95
NDEL1-204ENST00000578172 PDE6GP18545 87 aa9.13□□□□□ -0.95
NDEL1-204ENST00000578172 SYCNQ0VAF6 134 aa9.13□□□□□ -0.95
NDEL1-204ENST00000578172 KRTAP10-11P60412 298 aa9.12□□□□□ -0.95
NDEL1-204ENST00000578172 A0A0G2JQZ4 141 aa9.12□□□□□ -0.95
NDEL1-204ENST00000578172 A0A1W2PNN7 141 aa9.12□□□□□ -0.95
NDEL1-204ENST00000578172 FAM168BA1KXE4 195 aa9.12□□□□□ -0.95
NDEL1-204ENST00000578172 TMEM254Q8TBM7 123 aa9.12□□□□□ -0.95
NDEL1-204ENST00000578172 TENM2Q9NT68 2774 aa9.11□□□□□ -0.95
NDEL1-204ENST00000578172 PSCAO43653 123 aa9.11□□□□□ -0.95
NDEL1-204ENST00000578172 Q6ZRP5 223 aa9.1□□□□□ -0.95
NDEL1-204ENST00000578172 WFDC13Q8IUB5 93 aa9.1□□□□□ -0.95
NDEL1-204ENST00000578172 DEFB116Q30KQ4 102 aa9.1□□□□□ -0.95
NDEL1-204ENST00000578172 CASC10Q5T4H9 136 aa9.1□□□□□ -0.95
NDEL1-204ENST00000578172 PRO0628Q9UI54 55 aa9.1□□□□□ -0.95
NDEL1-204ENST00000578172 MUC7Q8TAX7 377 aa9.1□□□□□ -0.95
NDEL1-204ENST00000578172 LINC01600Q96MT4 127 aa9.09□□□□□ -0.95
NDEL1-204ENST00000578172 CSMD3Q7Z407 3707 aa9.08□□□□□ -0.96
NDEL1-204ENST00000578172 HIGD2AQ9BW72 106 aa9.08□□□□□ -0.96
NDEL1-204ENST00000578172 Q6ZQT0 140 aa9.07□□□□□ -0.96
NDEL1-204ENST00000578172 SERTAD4-AS1Q5TG53 156 aa9.06□□□□□ -0.96
NDEL1-204ENST00000578172 UBE2DNLQ8IWF7 75 aa9.06□□□□□ -0.96
NDEL1-204ENST00000578172 M0R378 163 aa9.06□□□□□ -0.96
NDEL1-204ENST00000578172 NDUFC1O43677 76 aa9.05□□□□□ -0.96
NDEL1-204ENST00000578172 ST20-AS1Q8NBB2 130 aa9.05□□□□□ -0.96
NDEL1-204ENST00000578172 KRTAP24-1Q3LI83 254 aa9.05□□□□□ -0.96
NDEL1-204ENST00000578172 PRYO14603 147 aa9.05□□□□□ -0.96
NDEL1-204ENST00000578172 IGLV6-57P01721 117 aa9.04□□□□□ -0.96
NDEL1-204ENST00000578172 MP68P56378 58 aa9.04□□□□□ -0.96
NDEL1-204ENST00000578172 VPREB1P12018 145 aa9.03□□□□□ -0.96
NDEL1-204ENST00000578172 C15orf56Q8N910 161 aa9.03□□□□□ -0.96
NDEL1-204ENST00000578172 PRR34Q9NV39 138 aa9.03□□□□□ -0.96
NDEL1-204ENST00000578172 EGFEM1PQ0D2K5 195 aa9.03□□□□□ -0.96
NDEL1-204ENST00000578172 C7orf33Q8WU49 177 aa9.03□□□□□ -0.96
NDEL1-204ENST00000578172 NDUFS5O43920 106 aa9.02□□□□□ -0.96
NDEL1-204ENST00000578172 OXTP01178 125 aa9.02□□□□□ -0.97
NDEL1-204ENST00000578172 H7BZZ5 65 aa9□□□□□ -0.97
NDEL1-204ENST00000578172 OBSCN-AS1Q96MR7 158 aa9□□□□□ -0.97
NDEL1-204ENST00000578172 PRLHP81277 87 aa8.99□□□□□ -0.97
NDEL1-204ENST00000578172 ELOF1P60002 83 aaKnown RBP8.98□□□□□ -0.97
NDEL1-204ENST00000578172 H0Y9J4 135 aa8.97□□□□□ -0.97
NDEL1-204ENST00000578172 SMIM29Q86T20 159 aa8.97□□□□□ -0.97
NDEL1-204ENST00000578172 PMAIP1Q13794 54 aa8.97□□□□□ -0.97
NDEL1-204ENST00000578172 CHKB-CPT1BH3BT56 60 aa8.96□□□□□ -0.97
NDEL1-204ENST00000578172 LINC00208Q96KT6 92 aa8.96□□□□□ -0.98
NDEL1-204ENST00000578172 LINC00588Q9Y4M8 146 aa8.95□□□□□ -0.98
NDEL1-204ENST00000578172 H3BQ85 93 aa8.95□□□□□ -0.98
NDEL1-204ENST00000578172 ATP5EP56381 51 aaPredicted RBP8.95□□□□□ -0.98
NDEL1-204ENST00000578172 LINC00167Q96N53 147 aa8.95□□□□□ -0.98
NDEL1-204ENST00000578172 SEC61GP60059 68 aa8.94□□□□□ -0.98
NDEL1-204ENST00000578172 CHTF8P0CG12 524 aa8.93□□□□□ -0.98
NDEL1-204ENST00000578172 C1orf137Q5JT78 98 aa8.93□□□□□ -0.98
NDEL1-204ENST00000578172 SRRM2Q9UQ35 2752 aaKnown RBP8.93□□□□□ -0.98
NDEL1-204ENST00000578172 CXCL6P80162 114 aa8.93□□□□□ -0.98
NDEL1-204ENST00000578172 Q5XG85 94 aa8.93□□□□□ -0.98
NDEL1-204ENST00000578172 ERC2-IT1O76042 136 aa8.92□□□□□ -0.98
NDEL1-204ENST00000578172 A6NED7 52 aa8.91□□□□□ -0.98
NDEL1-204ENST00000578172 LINC00528Q8N1L1 170 aa8.91□□□□□ -0.98
NDEL1-204ENST00000578172 LINC01556Q5JQF7 62 aa8.9□□□□□ -0.98
NDEL1-204ENST00000578172 CDK2AP2O75956 126 aa8.9□□□□□ -0.99
NDEL1-204ENST00000578172 MRPL55Q7Z7F7 128 aaKnown RBP8.9□□□□□ -0.99
NDEL1-204ENST00000578172 Q8N377 158 aa8.89□□□□□ -0.99
NDEL1-204ENST00000578172 LOC110117498A0A087WWA1 95 aa8.88□□□□□ -0.99
NDEL1-204ENST00000578172 GVQW2A0A096LPI5 108 aaPredicted RBP8.88□□□□□ -0.99
NDEL1-204ENST00000578172 KLKP1Q107X0 134 aa8.88□□□□□ -0.99
NDEL1-204ENST00000578172 PRR15LQ9BU68 103 aa8.87□□□□□ -0.99
NDEL1-204ENST00000578172 TRBV7-4A0A0J9YYF1 115 aa8.85□□□□□ -0.99
NDEL1-204ENST00000578172 A0A087WSZ3 146 aa8.85□□□□□ -0.99
NDEL1-204ENST00000578172 RPL37AP61513 92 aaKnown RBP8.84□□□□□ -0.99
NDEL1-204ENST00000578172 KRTAP26-1Q6PEX3 210 aa8.84□□□□□ -0.99
NDEL1-204ENST00000578172 PCOTHQ58A44 107 aa8.84□□□□□ -0.99
NDEL1-204ENST00000578172 UBE2AP49459 152 aa8.84□□□□□ -0.99
NDEL1-204ENST00000578172 IGKV4-1P06312 121 aa8.83□□□□□ -1
NDEL1-204ENST00000578172 Q9BRP9 147 aa8.83□□□□□ -1
NDEL1-204ENST00000578172 COL7A1Q02388 2944 aa8.83□□□□□ -1
NDEL1-204ENST00000578172 Q6ZRX8 168 aa8.82□□□□□ -1
NDEL1-204ENST00000578172 FP248Q71RG6 208 aaPredicted RBP8.82□□□□□ -1
NDEL1-204ENST00000578172 PHF5AQ7RTV0 110 aaKnown RBP8.82□□□□□ -1
NDEL1-204ENST00000578172 REG3GQ6UW15 175 aa8.81□□□□□ -1
NDEL1-204ENST00000578172 A8MUN3 132 aa8.81□□□□□ -1
NDEL1-204ENST00000578172 NDUFB1O75438 58 aa8.8□□□□□ -1
NDEL1-204ENST00000578172 FAM229BQ4G0N7 80 aa8.8□□□□□ -1
NDEL1-204ENST00000578172 DHRS4-AS1Q9P1J3 65 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 222.2 ms