RNA–Protein interactions for RNA: ENST00000577706.1

TOP2A-203, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-203ENST00000577706 TNRC6CQ9HCJ0 1690 aaKnown RBP0.8□□□□□ -2.28
TOP2A-203ENST00000577706 ANKRD17O75179 2603 aaKnown RBP0.8□□□□□ -2.28
TOP2A-203ENST00000577706 COL6A6A6NMZ7 2263 aa0.8□□□□□ -2.28
TOP2A-203ENST00000577706 SYCP2Q9BX26 1530 aa0.79□□□□□ -2.28
TOP2A-203ENST00000577706 COX6B1P14854 86 aa0.79□□□□□ -2.28
TOP2A-203ENST00000577706 DEFB105AQ8NG35 78 aa0.79□□□□□ -2.28
TOP2A-203ENST00000577706 CDKN2A-AS1Q9UH64 79 aa0.79□□□□□ -2.28
TOP2A-203ENST00000577706 ROS1P08922 2347 aa0.79□□□□□ -2.28
TOP2A-203ENST00000577706 TSC2P49815 1807 aa0.79□□□□□ -2.28
TOP2A-203ENST00000577706 CACNA1CQ13936 2221 aa0.79□□□□□ -2.28
TOP2A-203ENST00000577706 H0YAA0 97 aa0.78□□□□□ -2.28
TOP2A-203ENST00000577706 WFDC13Q8IUB5 93 aa0.77□□□□□ -2.29
TOP2A-203ENST00000577706 AGLP35573 1532 aa0.77□□□□□ -2.29
TOP2A-203ENST00000577706 MAST1Q9Y2H9 1570 aa0.77□□□□□ -2.29
TOP2A-203ENST00000577706 TJP1Q07157 1748 aa0.77□□□□□ -2.29
TOP2A-203ENST00000577706 MEGF8Q7Z7M0 2845 aa0.76□□□□□ -2.29
TOP2A-203ENST00000577706 KNTC1P50748 2209 aa0.76□□□□□ -2.29
TOP2A-203ENST00000577706 BIVM-ERCC5R4GMW8 1640 aa0.76□□□□□ -2.29
TOP2A-203ENST00000577706 IGIPA6NJ69 53 aa0.76□□□□□ -2.29
TOP2A-203ENST00000577706 LINC00158P58513 81 aa0.76□□□□□ -2.29
TOP2A-203ENST00000577706 TENM3Q9P273 2699 aa0.75□□□□□ -2.29
TOP2A-203ENST00000577706 EFCAB6Q5THR3 1501 aa0.75□□□□□ -2.29
TOP2A-203ENST00000577706 DEFB131BA0A096LNP1 70 aa0.75□□□□□ -2.29
TOP2A-203ENST00000577706 SNRPGP15A8MWD9 76 aa0.75□□□□□ -2.29
TOP2A-203ENST00000577706 LY75O60449 1722 aa0.75□□□□□ -2.29
TOP2A-203ENST00000577706 DDX60LQ5H9U9 1706 aaKnown RBP0.75□□□□□ -2.29
TOP2A-203ENST00000577706 Q5VSD8 79 aa0.74□□□□□ -2.29
TOP2A-203ENST00000577706 TIMM8BQ9Y5J9 83 aaPredicted RBP0.74□□□□□ -2.29
TOP2A-203ENST00000577706 C3P01024 1663 aa0.74□□□□□ -2.29
TOP2A-203ENST00000577706 URB1O60287 2271 aaKnown RBP0.73□□□□□ -2.29
TOP2A-203ENST00000577706 CROCC2H7BZ55 1655 aa0.73□□□□□ -2.29
TOP2A-203ENST00000577706 CCL22O00626 93 aa0.73□□□□□ -2.29
TOP2A-203ENST00000577706 PRH1P02810 166 aa0.73□□□□□ -2.29
TOP2A-203ENST00000577706 DEFB114Q30KQ6 69 aa0.73□□□□□ -2.29
TOP2A-203ENST00000577706 NMES1Q9C002 83 aa0.73□□□□□ -2.29
TOP2A-203ENST00000577706 FAM208BQ5VWN6 2430 aa0.73□□□□□ -2.29
TOP2A-203ENST00000577706 ABCA5Q8WWZ7 1642 aa0.72□□□□□ -2.29
TOP2A-203ENST00000577706 TOP2AP11388 1531 aaKnown RBP0.72□□□□□ -2.29
TOP2A-203ENST00000577706 C4AP0C0L4 1744 aa0.72□□□□□ -2.29
TOP2A-203ENST00000577706 C4BP0C0L5 1744 aa0.72□□□□□ -2.29
TOP2A-203ENST00000577706 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.71□□□□□ -2.34e-8■■□□□ 13.4
TOP2A-203ENST00000577706 ZNF462Q96JM2 2506 aa0.71□□□□□ -2.3
TOP2A-203ENST00000577706 DEFB130BP0DP73 79 aa0.71□□□□□ -2.3
TOP2A-203ENST00000577706 DEFB130AP0DP74 79 aa0.71□□□□□ -2.3
TOP2A-203ENST00000577706 NAV3Q8IVL0 2385 aa0.7□□□□□ -2.3
TOP2A-203ENST00000577706 CACNA1EQ15878 2313 aa0.7□□□□□ -2.3
TOP2A-203ENST00000577706 MRPL33O75394 65 aaKnown RBP0.7□□□□□ -2.3
TOP2A-203ENST00000577706 KRTAP2-3P0C7H8 128 aa0.7□□□□□ -2.3
TOP2A-203ENST00000577706 IAPPP10997 89 aa0.7□□□□□ -2.3
TOP2A-203ENST00000577706 KRTAP2-4Q9BYR9 128 aa0.7□□□□□ -2.3
TOP2A-203ENST00000577706 KRTAP2-1Q9BYU5 128 aa0.7□□□□□ -2.3
TOP2A-203ENST00000577706 NOTCH1P46531 2555 aa0.69□□□□□ -2.3
TOP2A-203ENST00000577706 NRXN3Q9Y4C0 1643 aa0.68□□□□□ -2.3
TOP2A-203ENST00000577706 SPINK4O60575 86 aa0.68□□□□□ -2.3
TOP2A-203ENST00000577706 TFF3Q07654 80 aa0.68□□□□□ -2.3
TOP2A-203ENST00000577706 DEFB109BQ30KR1 87 aa0.68□□□□□ -2.3
TOP2A-203ENST00000577706 MINOS1Q5TGZ0 78 aa0.68□□□□□ -2.3
TOP2A-203ENST00000577706 COX6B2Q6YFQ2 88 aa0.68□□□□□ -2.3
TOP2A-203ENST00000577706 CMC2Q9NRP2 79 aa0.68□□□□□ -2.3
TOP2A-203ENST00000577706 PLNP26678 52 aa0.67□□□□□ -2.3
TOP2A-203ENST00000577706 KRTAP19-3Q7Z4W3 81 aa0.67□□□□□ -2.3
TOP2A-203ENST00000577706 TOMM5Q8N4H5 51 aa0.67□□□□□ -2.3
TOP2A-203ENST00000577706 TTC28Q96AY4 2481 aa0.66□□□□□ -2.3
TOP2A-203ENST00000577706 ABCC8Q09428 1581 aa0.66□□□□□ -2.3
TOP2A-203ENST00000577706 PIEZO2Q9H5I5 2752 aa0.66□□□□□ -2.3
TOP2A-203ENST00000577706 LINC00308Q8TCZ7 52 aa0.66□□□□□ -2.3
TOP2A-203ENST00000577706 ASH1LQ9NR48 2969 aaKnown RBP0.66□□□□□ -2.3
TOP2A-203ENST00000577706 ADCY10Q96PN6 1610 aa0.66□□□□□ -2.3
TOP2A-203ENST00000577706 TOGARAM1Q9Y4F4 1720 aa0.66□□□□□ -2.3
TOP2A-203ENST00000577706 A0A1B0GUL6 1792 aa0.65□□□□□ -2.3
TOP2A-203ENST00000577706 LYNX1G3V0Z9 82 aa0.65□□□□□ -2.31
TOP2A-203ENST00000577706 RPS27P42677 84 aaKnown RBP0.65□□□□□ -2.31
TOP2A-203ENST00000577706 RPS27LQ71UM5 84 aaKnown RBP0.65□□□□□ -2.31
TOP2A-203ENST00000577706 ABRACLQ9P1F3 81 aa0.65□□□□□ -2.31
TOP2A-203ENST00000577706 GOLGA4Q13439 2230 aaKnown RBP0.65□□□□□ -2.31
TOP2A-203ENST00000577706 FBN2P35556 2912 aa0.65□□□□□ -2.31
TOP2A-203ENST00000577706 KIAA0586Q9BVV6 1533 aa0.64□□□□□ -2.31
TOP2A-203ENST00000577706 SMIM27A0A1W2PRY6 76 aa0.64□□□□□ -2.31
TOP2A-203ENST00000577706 SERF2P84101 59 aa0.64□□□□□ -2.31
TOP2A-203ENST00000577706 C6orf48Q9UBA6 75 aa0.64□□□□□ -2.31
TOP2A-203ENST00000577706 USF3Q68DE3 2245 aa0.63□□□□□ -2.31
TOP2A-203ENST00000577706 ZNF469Q96JG9 3925 aaPredicted RBP0.63□□□□□ -2.31
TOP2A-203ENST00000577706 DEPDC5O75140 1603 aa0.62□□□□□ -2.31
TOP2A-203ENST00000577706 CACNA1HO95180 2353 aa0.62□□□□□ -2.31
TOP2A-203ENST00000577706 NFAT5O94916 1531 aa0.61□□□□□ -2.31
TOP2A-203ENST00000577706 H0YGX0 51 aa0.61□□□□□ -2.31
TOP2A-203ENST00000577706 IQGAP1P46940 1657 aa0.61□□□□□ -2.31
TOP2A-203ENST00000577706 ANKRD36CQ5JPF3 1778 aa0.6□□□□□ -2.31
TOP2A-203ENST00000577706 SPINK6Q6UWN8 80 aa0.6□□□□□ -2.31
TOP2A-203ENST00000577706 SMR3AQ99954 134 aa0.6□□□□□ -2.31
TOP2A-203ENST00000577706 POLQO75417 2590 aa0.6□□□□□ -2.31
TOP2A-203ENST00000577706 LMO7Q8WWI1 1683 aa0.59□□□□□ -2.31
TOP2A-203ENST00000577706 TNCP24821 2201 aa0.59□□□□□ -2.31
TOP2A-203ENST00000577706 LINC01546A6NGU7 62 aa0.59□□□□□ -2.31
TOP2A-203ENST00000577706 DEFB106AQ8N104 65 aa0.59□□□□□ -2.31
TOP2A-203ENST00000577706 TMEM167BQ9NRX6 74 aa0.59□□□□□ -2.31
TOP2A-203ENST00000577706 AHCTF1Q8WYP5 2266 aa0.59□□□□□ -2.32
TOP2A-203ENST00000577706 CDC42BPAQ5VT25 1732 aa0.58□□□□□ -2.32
TOP2A-203ENST00000577706 IQGAP2Q13576 1575 aa0.58□□□□□ -2.32
TOP2A-203ENST00000577706 PTPRQQ9UMZ3 2332 aa0.58□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms