RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 Q6ZQT0 140 aa15.23■□□□□ 0.03
NPLOC4-217ENST00000574897 FAM236AA0A1B0GUQ0 79 aa15.22■□□□□ 0.03
NPLOC4-217ENST00000574897 FAM236BA0A1B0GV22 79 aa15.22■□□□□ 0.03
NPLOC4-217ENST00000574897 IMUPQ9GZP8 106 aa15.22■□□□□ 0.03
NPLOC4-217ENST00000574897 PLA2G2DQ9UNK4 145 aa15.22■□□□□ 0.03
NPLOC4-217ENST00000574897 FAM19A5Q7Z5A7 132 aaPredicted RBP15.22■□□□□ 0.03
NPLOC4-217ENST00000574897 PRKDCP78527 4128 aaKnown RBP15.22■□□□□ 0.03
NPLOC4-217ENST00000574897 PSCAO43653 123 aa15.19■□□□□ 0.02
NPLOC4-217ENST00000574897 LOC107984640A0A0U1RRK4 108 aa15.19■□□□□ 0.02
NPLOC4-217ENST00000574897 IGLV1-50A0A075B6I6 118 aa15.17■□□□□ 0.02
NPLOC4-217ENST00000574897 IGLV5-37A0A075B6J1 123 aa15.17■□□□□ 0.02
NPLOC4-217ENST00000574897 Q6JHZ5 121 aa15.17■□□□□ 0.02
NPLOC4-217ENST00000574897 LOC110117498A0A087WWA1 95 aa15.17■□□□□ 0.02
NPLOC4-217ENST00000574897 DSCR8Q96T75 97 aa15.16■□□□□ 0.02
NPLOC4-217ENST00000574897 IGLV2-33A0A075B6J2 118 aaPredicted RBP15.15■□□□□ 0.02
NPLOC4-217ENST00000574897 STARD9Q9P2P6 4700 aa15.14■□□□□ 0.01
NPLOC4-217ENST00000574897 A0A096LNI7 61 aa15.13■□□□□ 0.01
NPLOC4-217ENST00000574897 KRTAP4-16G5E9R7 235 aaPredicted RBP15.13■□□□□ 0.01
NPLOC4-217ENST00000574897 IGKV2-24A0A0C4DH68 120 aa15.13■□□□□ 0.01
NPLOC4-217ENST00000574897 H3BQ85 93 aa15.13■□□□□ 0.01
NPLOC4-217ENST00000574897 MRPL55Q7Z7F7 128 aaKnown RBP15.13■□□□□ 0.01
NPLOC4-217ENST00000574897 CCDC179H3BU77 68 aa15.12■□□□□ 0.01
NPLOC4-217ENST00000574897 A0A087WVE0 104 aa15.12■□□□□ 0.01
NPLOC4-217ENST00000574897 DEFB105AQ8NG35 78 aa15.12■□□□□ 0.01
NPLOC4-217ENST00000574897 MEGF8Q7Z7M0 2845 aa15.11■□□□□ 0.01
NPLOC4-217ENST00000574897 Q9BRP9 147 aa15.11■□□□□ 0.01
NPLOC4-217ENST00000574897 B5MCH6 92 aa15.1■□□□□ 0.01
NPLOC4-217ENST00000574897 Q6ZRX8 168 aa15.1■□□□□ 0.01
NPLOC4-217ENST00000574897 TRBV7-4A0A0J9YYF1 115 aa15.1■□□□□ 0.01
NPLOC4-217ENST00000574897 PRYO14603 147 aa15.1■□□□□ 0.01
NPLOC4-217ENST00000574897 SPRR1AP35321 89 aa15.09■□□□□ 0.01
NPLOC4-217ENST00000574897 CNBPP62633 177 aaKnown RBP15.07■□□□□ 0
NPLOC4-217ENST00000574897 ETDCA0A1B0GVM5 59 aa15.07■□□□□ 0
NPLOC4-217ENST00000574897 DNHD1Q96M86 4753 aa15.06■□□□□ 0
NPLOC4-217ENST00000574897 NUPR2A6NF83 97 aa15.06■□□□□ 0
NPLOC4-217ENST00000574897 GHRHP01286 108 aa15.06■□□□□ 0
NPLOC4-217ENST00000574897 A0A1W2PNN7 141 aa15.06■□□□□ 0
NPLOC4-217ENST00000574897 Q8N377 158 aa15.06■□□□□ 0
NPLOC4-217ENST00000574897 UBL5Q9BZL1 73 aa15.06■□□□□ 0
NPLOC4-217ENST00000574897 C3orf22Q8N5N4 141 aa15.05■□□□□ -0
NPLOC4-217ENST00000574897 NBDYA0A0U1RRE5 68 aa15.04■□□□□ -0
NPLOC4-217ENST00000574897 LINC01547P58512 204 aaPredicted RBP15.04■□□□□ -0
NPLOC4-217ENST00000574897 ST20-AS1Q8NBB2 130 aa15.04■□□□□ -0
NPLOC4-217ENST00000574897 C16orf90A8MZG2 172 aa15.04■□□□□ -0
NPLOC4-217ENST00000574897 CHTF8P0CG12 524 aa15.03■□□□□ -0
NPLOC4-217ENST00000574897 ERC2-IT1O76042 136 aa15.03■□□□□ -0
NPLOC4-217ENST00000574897 HIST1H4AP62805 103 aaKnown RBP15.03■□□□□ -0
NPLOC4-217ENST00000574897 PDE6GP18545 87 aa15.02■□□□□ -0
NPLOC4-217ENST00000574897 DHRS4-AS1Q9P1J3 65 aa15.01□□□□□ -0.01
NPLOC4-217ENST00000574897 Q6ZVQ6 151 aa15□□□□□ -0.01
NPLOC4-217ENST00000574897 FAM19A1Q7Z5A9 133 aa15□□□□□ -0.01
NPLOC4-217ENST00000574897 LRCOL1A6NCL2 159 aa15□□□□□ -0.01
NPLOC4-217ENST00000574897 VPS13DQ5THJ4 4388 aa14.99□□□□□ -0.01
NPLOC4-217ENST00000574897 REG3GQ6UW15 175 aa14.99□□□□□ -0.01
NPLOC4-217ENST00000574897 UBE2BP63146 152 aa14.97□□□□□ -0.01
NPLOC4-217ENST00000574897 Q6ZRN7 208 aaPredicted RBP14.97□□□□□ -0.01
NPLOC4-217ENST00000574897 C14orf177Q52M58 125 aa14.96□□□□□ -0.02
NPLOC4-217ENST00000574897 HAMPP81172 84 aa14.95□□□□□ -0.02
NPLOC4-217ENST00000574897 ATP5EP2Q5VTU8 51 aa14.95□□□□□ -0.02
NPLOC4-217ENST00000574897 KRTAP11-1Q8IUC1 163 aa14.93□□□□□ -0.02
NPLOC4-217ENST00000574897 PRLHP81277 87 aa14.92□□□□□ -0.02
NPLOC4-217ENST00000574897 PHF5AQ7RTV0 110 aaKnown RBP14.91□□□□□ -0.02
NPLOC4-217ENST00000574897 C9orf163Q8N9P6 203 aa14.9□□□□□ -0.02
NPLOC4-217ENST00000574897 SCXQ7RTU7 201 aa14.9□□□□□ -0.02
NPLOC4-217ENST00000574897 IGLV5-48A0A075B6I7 105 aa14.89□□□□□ -0.03
NPLOC4-217ENST00000574897 SRRM2Q9UQ35 2752 aaKnown RBP14.89□□□□□ -0.03
NPLOC4-217ENST00000574897 PANO1I0J062 215 aa14.88□□□□□ -0.03
NPLOC4-217ENST00000574897 ATOX1O00244 68 aa14.88□□□□□ -0.03
NPLOC4-217ENST00000574897 KMT2AQ03164 3969 aa14.88□□□□□ -0.03
NPLOC4-217ENST00000574897 C3orf84H3BNL1 204 aa14.87□□□□□ -0.03
NPLOC4-217ENST00000574897 FUSP35637 526 aaKnown RBP eCLIP14.87□□□□□ -0.037e-7■■□□□ 11.7
NPLOC4-217ENST00000574897 TGP01266 2768 aa14.86□□□□□ -0.03
NPLOC4-217ENST00000574897 TNP2Q05952 138 aa14.85□□□□□ -0.03
NPLOC4-217ENST00000574897 SS18L2Q9UHA2 77 aa14.82□□□□□ -0.04
NPLOC4-217ENST00000574897 HIGD2AQ9BW72 106 aa14.82□□□□□ -0.04
NPLOC4-217ENST00000574897 COX7CP15954 63 aa14.81□□□□□ -0.04
NPLOC4-217ENST00000574897 SMIM29Q86T20 159 aa14.81□□□□□ -0.04
NPLOC4-217ENST00000574897 A0A1W2PNM2 257 aa14.8□□□□□ -0.04
NPLOC4-217ENST00000574897 C1orf137Q5JT78 98 aa14.8□□□□□ -0.04
NPLOC4-217ENST00000574897 UQCRQO14949 82 aa14.8□□□□□ -0.04
NPLOC4-217ENST00000574897 DNAH2Q9P225 4427 aa14.79□□□□□ -0.04
NPLOC4-217ENST00000574897 CXCL6P80162 114 aa14.78□□□□□ -0.04
NPLOC4-217ENST00000574897 A0A0G2JQZ4 141 aa14.78□□□□□ -0.04
NPLOC4-217ENST00000574897 C9orf153Q5TBE3 101 aa14.77□□□□□ -0.04
NPLOC4-217ENST00000574897 HECTD4Q9Y4D8 3996 aa14.76□□□□□ -0.05
NPLOC4-217ENST00000574897 FBN3Q75N90 2809 aa14.76□□□□□ -0.05
NPLOC4-217ENST00000574897 A0A087WTM6 91 aa14.75□□□□□ -0.05
NPLOC4-217ENST00000574897 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.75□□□□□ -0.05
NPLOC4-217ENST00000574897 NREPQ16612 68 aa14.74□□□□□ -0.05
NPLOC4-217ENST00000574897 Q8N9L7 120 aa14.74□□□□□ -0.05
NPLOC4-217ENST00000574897 DPH3Q96FX2 82 aa14.74□□□□□ -0.05
NPLOC4-217ENST00000574897 EPM2AB3EWF7 344 aa14.73□□□□□ -0.05
NPLOC4-217ENST00000574897 SERP2Q8N6R1 65 aa14.73□□□□□ -0.05
NPLOC4-217ENST00000574897 LINC00476Q8WZB0 136 aa14.71□□□□□ -0.05
NPLOC4-217ENST00000574897 Q6ZR54 194 aa14.7□□□□□ -0.06
NPLOC4-217ENST00000574897 Q8NBF4 154 aa14.7□□□□□ -0.06
NPLOC4-217ENST00000574897 CYSTM1Q9H1C7 97 aa14.7□□□□□ -0.06
NPLOC4-217ENST00000574897 LINC00474Q9P2X8 69 aa14.68□□□□□ -0.06
NPLOC4-217ENST00000574897 SPACA4Q8TDM5 124 aa14.67□□□□□ -0.06
NPLOC4-217ENST00000574897 DNAH17Q9UFH2 4485 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms