RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 A0A096LNI7 61 aa18.18■□□□□ 0.5
CTDNEP1-210ENST00000574322 RYR2Q92736 4967 aa18.15■□□□□ 0.5
CTDNEP1-210ENST00000574322 IGLV1-50A0A075B6I6 118 aa18.15■□□□□ 0.5
CTDNEP1-210ENST00000574322 DNAH6Q9C0G6 4158 aa18.15■□□□□ 0.5
CTDNEP1-210ENST00000574322 MRPL55Q7Z7F7 128 aaKnown RBP18.13■□□□□ 0.49
CTDNEP1-210ENST00000574322 LINC00528Q8N1L1 170 aa18.13■□□□□ 0.49
CTDNEP1-210ENST00000574322 OBSCN-AS1Q96MR7 158 aa18.13■□□□□ 0.49
CTDNEP1-210ENST00000574322 TMEM256-PLSCR3K7ERE1 68 aa18.12■□□□□ 0.49
CTDNEP1-210ENST00000574322 PRYO14603 147 aa18.12■□□□□ 0.49
CTDNEP1-210ENST00000574322 A0A087WTM6 91 aa18.12■□□□□ 0.49
CTDNEP1-210ENST00000574322 FAM19A5Q7Z5A7 132 aaPredicted RBP18.12■□□□□ 0.49
CTDNEP1-210ENST00000574322 H3BQ85 93 aa18.09■□□□□ 0.49
CTDNEP1-210ENST00000574322 SPRR1AP35321 89 aa18.09■□□□□ 0.49
CTDNEP1-210ENST00000574322 INAFM2P0DMQ5 153 aa18.09■□□□□ 0.49
CTDNEP1-210ENST00000574322 SDIM1Q6ZPB5 146 aa18.08■□□□□ 0.48
CTDNEP1-210ENST00000574322 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP18.07■□□□□ 0.48
CTDNEP1-210ENST00000574322 IGKV2-24A0A0C4DH68 120 aa18.06■□□□□ 0.48
CTDNEP1-210ENST00000574322 KRTAP4-16G5E9R7 235 aaPredicted RBP18.06■□□□□ 0.48
CTDNEP1-210ENST00000574322 C1orf134Q5TEV5 83 aa18.06■□□□□ 0.48
CTDNEP1-210ENST00000574322 RPL37AP8A6NKH3 93 aa18.06■□□□□ 0.48
CTDNEP1-210ENST00000574322 FAM240AA0A1B0GVK7 77 aa18.04■□□□□ 0.48
CTDNEP1-210ENST00000574322 A0A1W2PNN7 141 aa18.04■□□□□ 0.48
CTDNEP1-210ENST00000574322 Q6ZQY7 126 aa18.04■□□□□ 0.48
CTDNEP1-210ENST00000574322 CDIP1Q9H305 208 aa18.04■□□□□ 0.48
CTDNEP1-210ENST00000574322 RYR3Q15413 4870 aa18.04■□□□□ 0.48
CTDNEP1-210ENST00000574322 LINC00474Q9P2X8 69 aa18.03■□□□□ 0.48
CTDNEP1-210ENST00000574322 GHRHP01286 108 aa18.01■□□□□ 0.47
CTDNEP1-210ENST00000574322 DNAH2Q9P225 4427 aa18.01■□□□□ 0.47
CTDNEP1-210ENST00000574322 JMJD7-PLA2G4BH0Y9G9 81 aa18■□□□□ 0.47
CTDNEP1-210ENST00000574322 B5MCH6 92 aa17.98■□□□□ 0.47
CTDNEP1-210ENST00000574322 Q6ZRX8 168 aa17.98■□□□□ 0.47
CTDNEP1-210ENST00000574322 CHTF8P0CG12 524 aa17.98■□□□□ 0.47
CTDNEP1-210ENST00000574322 ACYP1P07311 99 aa17.95■□□□□ 0.46
CTDNEP1-210ENST00000574322 DHRS4-AS1Q9P1J3 65 aa17.95■□□□□ 0.46
CTDNEP1-210ENST00000574322 ETDCA0A1B0GVM5 59 aa17.95■□□□□ 0.46
CTDNEP1-210ENST00000574322 RTL8CO15255 209 aa17.95■□□□□ 0.46
CTDNEP1-210ENST00000574322 REG3GQ6UW15 175 aa17.94■□□□□ 0.46
CTDNEP1-210ENST00000574322 C14orf132Q9NPU4 83 aa17.92■□□□□ 0.46
CTDNEP1-210ENST00000574322 EPM2AB3EWF7 344 aa17.92■□□□□ 0.46
CTDNEP1-210ENST00000574322 SIGMAR1Q99720 223 aa17.9■□□□□ 0.46
CTDNEP1-210ENST00000574322 Q9BRP9 147 aa17.89■□□□□ 0.45
CTDNEP1-210ENST00000574322 SPACA4Q8TDM5 124 aa17.88■□□□□ 0.45
CTDNEP1-210ENST00000574322 PANO1I0J062 215 aa17.86■□□□□ 0.45
CTDNEP1-210ENST00000574322 DNAH17Q9UFH2 4485 aa17.86■□□□□ 0.45
CTDNEP1-210ENST00000574322 PHF5AQ7RTV0 110 aaKnown RBP17.84■□□□□ 0.45
CTDNEP1-210ENST00000574322 LAMTOR3Q9UHA4 124 aa17.84■□□□□ 0.45
CTDNEP1-210ENST00000574322 FRAS1Q86XX4 4008 aa17.84■□□□□ 0.45
CTDNEP1-210ENST00000574322 LINC00336Q6ZUF6 198 aa17.84■□□□□ 0.45
CTDNEP1-210ENST00000574322 XGP55808 180 aa17.83■□□□□ 0.44
CTDNEP1-210ENST00000574322 RBM3P98179 157 aaKnown RBP17.83■□□□□ 0.44
CTDNEP1-210ENST00000574322 TNP2Q05952 138 aa17.83■□□□□ 0.44
CTDNEP1-210ENST00000574322 GAGE2AQ6NT46 116 aa17.82■□□□□ 0.44
CTDNEP1-210ENST00000574322 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP17.82■□□□□ 0.44
CTDNEP1-210ENST00000574322 CCKP06307 115 aa17.81■□□□□ 0.44
CTDNEP1-210ENST00000574322 HECTD4Q9Y4D8 3996 aa17.81■□□□□ 0.44
CTDNEP1-210ENST00000574322 LOC110117498A0A087WWA1 95 aa17.79■□□□□ 0.44
CTDNEP1-210ENST00000574322 IGLV5-52A0A0A0MRZ9 124 aa17.78■□□□□ 0.44
CTDNEP1-210ENST00000574322 NDUFV3P56181 108 aaKnown RBP17.78■□□□□ 0.44
CTDNEP1-210ENST00000574322 LINC01547P58512 204 aaPredicted RBP17.78■□□□□ 0.44
CTDNEP1-210ENST00000574322 A0A1B0GV72 72 aa17.78■□□□□ 0.44
CTDNEP1-210ENST00000574322 UBE2BP63146 152 aa17.78■□□□□ 0.44
CTDNEP1-210ENST00000574322 KRTAP11-1Q8IUC1 163 aa17.78■□□□□ 0.44
CTDNEP1-210ENST00000574322 IGLV5-48A0A075B6I7 105 aa17.76■□□□□ 0.43
CTDNEP1-210ENST00000574322 FAT2Q9NYQ8 4349 aa17.76■□□□□ 0.43
CTDNEP1-210ENST00000574322 Q8N377 158 aa17.75■□□□□ 0.43
CTDNEP1-210ENST00000574322 SMCR5Q8TEV8 140 aa17.75■□□□□ 0.43
CTDNEP1-210ENST00000574322 H0Y9J4 135 aa17.75■□□□□ 0.43
CTDNEP1-210ENST00000574322 MT-ATP8P03928 68 aa17.75■□□□□ 0.43
CTDNEP1-210ENST00000574322 PDE6GP18545 87 aa17.75■□□□□ 0.43
CTDNEP1-210ENST00000574322 DPH3Q96FX2 82 aa17.75■□□□□ 0.43
CTDNEP1-210ENST00000574322 Q6ZQT0 140 aa17.74■□□□□ 0.43
CTDNEP1-210ENST00000574322 FUSP35637 526 aaKnown RBP eCLIP17.73■□□□□ 0.43
CTDNEP1-210ENST00000574322 FAM19A1Q7Z5A9 133 aa17.73■□□□□ 0.43
CTDNEP1-210ENST00000574322 ERC2-IT1O76042 136 aa17.72■□□□□ 0.43
CTDNEP1-210ENST00000574322 DSCR8Q96T75 97 aa17.72■□□□□ 0.43
CTDNEP1-210ENST00000574322 TRBV7-4A0A0J9YYF1 115 aa17.71■□□□□ 0.43
CTDNEP1-210ENST00000574322 PLAC8Q9NZF1 115 aa17.69■□□□□ 0.42
CTDNEP1-210ENST00000574322 C21orf62-AS1Q17RA5 79 aa17.67■□□□□ 0.42
CTDNEP1-210ENST00000574322 PRLHP81277 87 aa17.67■□□□□ 0.42
CTDNEP1-210ENST00000574322 ST20-AS1Q8NBB2 130 aa17.67■□□□□ 0.42
CTDNEP1-210ENST00000574322 DEFB105AQ8NG35 78 aa17.67■□□□□ 0.42
CTDNEP1-210ENST00000574322 LINC00643Q86TS7 51 aa17.66■□□□□ 0.42
CTDNEP1-210ENST00000574322 LINC00846Q9NV44 126 aa17.64■□□□□ 0.41
CTDNEP1-210ENST00000574322 BCE1O60756 84 aa17.64■□□□□ 0.41
CTDNEP1-210ENST00000574322 SCGB1A1P11684 91 aa17.64■□□□□ 0.41
CTDNEP1-210ENST00000574322 A0A1B0GVY2 172 aa17.61■□□□□ 0.41
CTDNEP1-210ENST00000574322 KRTAP10-2P60368 255 aa17.6■□□□□ 0.41
CTDNEP1-210ENST00000574322 KRTAP13-1Q8IUC0 172 aa17.6■□□□□ 0.41
CTDNEP1-210ENST00000574322 DNAH11Q96DT5 4516 aa17.59■□□□□ 0.41
CTDNEP1-210ENST00000574322 HIGD2AQ9BW72 106 aa17.58■□□□□ 0.4
CTDNEP1-210ENST00000574322 PKD1P98161 4303 aa17.58■□□□□ 0.4
CTDNEP1-210ENST00000574322 UBE2AP49459 152 aa17.55■□□□□ 0.4
CTDNEP1-210ENST00000574322 Q6Q795 121 aa17.55■□□□□ 0.4
CTDNEP1-210ENST00000574322 TRBV7-7A0A0K0K1E9 115 aa17.54■□□□□ 0.4
CTDNEP1-210ENST00000574322 SMIM29Q86T20 159 aa17.54■□□□□ 0.4
CTDNEP1-210ENST00000574322 C3orf22Q8N5N4 141 aa17.52■□□□□ 0.39
CTDNEP1-210ENST00000574322 SPRR1BP22528 89 aa17.5■□□□□ 0.39
CTDNEP1-210ENST00000574322 IMUPQ9GZP8 106 aa17.5■□□□□ 0.39
CTDNEP1-210ENST00000574322 Q6JHZ5 121 aa17.48■□□□□ 0.39
CTDNEP1-210ENST00000574322 PCP4P48539 62 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms