RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 HIST1H2BDP58876 126 aa5.51□□□□□ -1.53
NPLOC4-212ENST00000573328 HIST1H2BCP62807 126 aa5.51□□□□□ -1.53
NPLOC4-212ENST00000573328 HIST2H2BEQ16778 126 aa5.51□□□□□ -1.53
NPLOC4-212ENST00000573328 LINC00483Q53H64 154 aa5.51□□□□□ -1.53
NPLOC4-212ENST00000573328 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.51□□□□□ -1.53
NPLOC4-212ENST00000573328 ADAMTSL4-AS1Q5T5F5 129 aa5.51□□□□□ -1.53
NPLOC4-212ENST00000573328 C9orf153Q5TBE3 101 aa5.51□□□□□ -1.53
NPLOC4-212ENST00000573328 SOSTDC1Q6X4U4 206 aa5.51□□□□□ -1.53
NPLOC4-212ENST00000573328 HIST1H2BHQ93079 126 aa5.51□□□□□ -1.53
NPLOC4-212ENST00000573328 HIST1H2BNQ99877 126 aa5.51□□□□□ -1.53
NPLOC4-212ENST00000573328 HIST1H2BMQ99879 126 aa5.51□□□□□ -1.53
NPLOC4-212ENST00000573328 ZNF73O43830 326 aaPredicted RBP5.5□□□□□ -1.53
NPLOC4-212ENST00000573328 SPINK1P00995 79 aa5.5□□□□□ -1.53
NPLOC4-212ENST00000573328 FP248Q71RG6 208 aaPredicted RBP5.5□□□□□ -1.53
NPLOC4-212ENST00000573328 OR13C6PQ8NH95 151 aa5.5□□□□□ -1.53
NPLOC4-212ENST00000573328 CBY1Q9Y3M2 126 aa5.5□□□□□ -1.53
NPLOC4-212ENST00000573328 MUC2Q02817 5179 aa5.5□□□□□ -1.53
NPLOC4-212ENST00000573328 ZNF815PA8K554 130 aa5.49□□□□□ -1.53
NPLOC4-212ENST00000573328 EIF4EBP3O60516 100 aaPredicted RBP5.49□□□□□ -1.53
NPLOC4-212ENST00000573328 PET117Q6UWS5 81 aa5.49□□□□□ -1.53
NPLOC4-212ENST00000573328 SPANXCQ9NY87 97 aa5.49□□□□□ -1.53
NPLOC4-212ENST00000573328 LINC01545Q5VT33 79 aa5.48□□□□□ -1.53
NPLOC4-212ENST00000573328 LINC00308Q8TCZ7 52 aa5.48□□□□□ -1.53
NPLOC4-212ENST00000573328 KRTDAPP60985 99 aa5.47□□□□□ -1.53
NPLOC4-212ENST00000573328 SSBP3-AS1Q7Z2R9 100 aa5.47□□□□□ -1.53
NPLOC4-212ENST00000573328 TIMM17BO60830 172 aa5.46□□□□□ -1.54
NPLOC4-212ENST00000573328 C3orf79P0CE67 100 aa5.46□□□□□ -1.54
NPLOC4-212ENST00000573328 SCGB1D4Q6XE38 83 aa5.46□□□□□ -1.54
NPLOC4-212ENST00000573328 ST20-AS1Q8NBB2 130 aa5.46□□□□□ -1.54
NPLOC4-212ENST00000573328 LITAFQ99732 161 aa5.46□□□□□ -1.54
NPLOC4-212ENST00000573328 TTTY13Q9BZ97 58 aa5.46□□□□□ -1.54
NPLOC4-212ENST00000573328 C20orf202A1L168 122 aa5.45□□□□□ -1.54
NPLOC4-212ENST00000573328 RPS29P62273 56 aaKnown RBP5.45□□□□□ -1.54
NPLOC4-212ENST00000573328 SPANXDQ9BXN6 97 aa5.45□□□□□ -1.54
NPLOC4-212ENST00000573328 KRTAP9-2Q9BYQ4 174 aa5.45□□□□□ -1.54
NPLOC4-212ENST00000573328 SLC25A20O43772 301 aa5.44□□□□□ -1.54
NPLOC4-212ENST00000573328 SMCPP49901 116 aaPredicted RBP5.44□□□□□ -1.54
NPLOC4-212ENST00000573328 KRTAP13-3Q3SY46 172 aa5.44□□□□□ -1.54
NPLOC4-212ENST00000573328 Q8N377 158 aa5.44□□□□□ -1.54
NPLOC4-212ENST00000573328 DHRS4-AS1Q9P1J3 65 aa5.44□□□□□ -1.54
NPLOC4-212ENST00000573328 MUC17Q685J3 4493 aa5.43□□□□□ -1.54
NPLOC4-212ENST00000573328 KRTAP9-6A0A140TA67 174 aa5.43□□□□□ -1.54
NPLOC4-212ENST00000573328 COX7BP24311 80 aa5.43□□□□□ -1.54
NPLOC4-212ENST00000573328 SLC25A34Q6PIV7 304 aa5.43□□□□□ -1.54
NPLOC4-212ENST00000573328 LINC00518Q8N0U6 118 aa5.43□□□□□ -1.54
NPLOC4-212ENST00000573328 C5orf52A6NGY3 159 aa5.42□□□□□ -1.54
NPLOC4-212ENST00000573328 C6orf99Q4VX62 202 aa5.42□□□□□ -1.54
NPLOC4-212ENST00000573328 ATOH7Q8N100 152 aa5.42□□□□□ -1.54
NPLOC4-212ENST00000573328 COPS9Q8WXC6 57 aa5.42□□□□□ -1.54
NPLOC4-212ENST00000573328 A6NJY4 79 aa5.41□□□□□ -1.54
NPLOC4-212ENST00000573328 ELOF1P60002 83 aaKnown RBP5.41□□□□□ -1.54
NPLOC4-212ENST00000573328 HRCT1Q6UXD1 115 aa5.41□□□□□ -1.54
NPLOC4-212ENST00000573328 LAMTOR3Q9UHA4 124 aa5.41□□□□□ -1.54
NPLOC4-212ENST00000573328 TAL2Q16559 108 aa5.4□□□□□ -1.54
NPLOC4-212ENST00000573328 ANKRD39Q53RE8 183 aa5.4□□□□□ -1.54
NPLOC4-212ENST00000573328 COA6Q5JTJ3 125 aaKnown RBP5.4□□□□□ -1.54
NPLOC4-212ENST00000573328 DEFB105AQ8NG35 78 aa5.4□□□□□ -1.54
NPLOC4-212ENST00000573328 LIMD2Q9BT23 127 aa5.4□□□□□ -1.54
NPLOC4-212ENST00000573328 A6NDN8 102 aa5.39□□□□□ -1.55
NPLOC4-212ENST00000573328 SPRR1BP22528 89 aa5.39□□□□□ -1.55
NPLOC4-212ENST00000573328 SEC61BP60468 96 aaKnown RBP5.39□□□□□ -1.55
NPLOC4-212ENST00000573328 Q1RN00 199 aa5.39□□□□□ -1.55
NPLOC4-212ENST00000573328 IFITM1P13164 125 aa5.38□□□□□ -1.55
NPLOC4-212ENST00000573328 AKR1D1P51857 326 aa5.38□□□□□ -1.55
NPLOC4-212ENST00000573328 ASB16-AS1Q495Z4 193 aa5.38□□□□□ -1.55
NPLOC4-212ENST00000573328 A0A1B0GWB2 263 aa5.37□□□□□ -1.55
NPLOC4-212ENST00000573328 LCE2AQ5TA79 106 aaPredicted RBP5.37□□□□□ -1.55
NPLOC4-212ENST00000573328 Q6ZVH6 145 aa5.37□□□□□ -1.55
NPLOC4-212ENST00000573328 PCP2Q8IVA1 136 aa5.37□□□□□ -1.55
NPLOC4-212ENST00000573328 MUSTN1Q8IVN3 82 aa5.37□□□□□ -1.55
NPLOC4-212ENST00000573328 FAT4Q6V0I7 4981 aa5.37□□□□□ -1.55
NPLOC4-212ENST00000573328 TRBV7-6A0A0J9YX20 115 aa5.36□□□□□ -1.55
NPLOC4-212ENST00000573328 TEX49A0A1B0GTD5 131 aa5.36□□□□□ -1.55
NPLOC4-212ENST00000573328 TRAV13-2A0A0B4J235 113 aa5.35□□□□□ -1.55
NPLOC4-212ENST00000573328 S100A2P29034 98 aa5.35□□□□□ -1.55
NPLOC4-212ENST00000573328 XP32Q5T750 250 aa5.35□□□□□ -1.55
NPLOC4-212ENST00000573328 PRO1933Q9H354 126 aa5.35□□□□□ -1.55
NPLOC4-212ENST00000573328 HSBP1L1C9JCN9 74 aa5.34□□□□□ -1.55
NPLOC4-212ENST00000573328 H7C2G1 150 aa5.34□□□□□ -1.55
NPLOC4-212ENST00000573328 NHP2Q9NX24 153 aaKnown RBP5.34□□□□□ -1.55
NPLOC4-212ENST00000573328 A4D1N5 150 aa5.33□□□□□ -1.56
NPLOC4-212ENST00000573328 C9orf92A6NGG3 77 aa5.33□□□□□ -1.56
NPLOC4-212ENST00000573328 SNRPEP62304 92 aaKnown RBP5.33□□□□□ -1.56
NPLOC4-212ENST00000573328 LINC01547P58512 204 aaPredicted RBP5.32□□□□□ -1.56
NPLOC4-212ENST00000573328 CD164Q04900 197 aa5.32□□□□□ -1.56
NPLOC4-212ENST00000573328 SMIM11BQ8TCY0 68 aa5.32□□□□□ -1.56
NPLOC4-212ENST00000573328 F8WEM9 126 aa5.31□□□□□ -1.56
NPLOC4-212ENST00000573328 HIST3H2BBQ8N257 126 aa5.31□□□□□ -1.56
NPLOC4-212ENST00000573328 KRTAP4-1Q9BYQ7 146 aa5.31□□□□□ -1.56
NPLOC4-212ENST00000573328 IGLV5-48A0A075B6I7 105 aa5.3□□□□□ -1.56
NPLOC4-212ENST00000573328 S100A6P06703 90 aa5.3□□□□□ -1.56
NPLOC4-212ENST00000573328 VAMP3Q15836 100 aa5.3□□□□□ -1.56
NPLOC4-212ENST00000573328 SMIM29Q86T20 159 aa5.3□□□□□ -1.56
NPLOC4-212ENST00000573328 HIST1H2BLQ99880 126 aa5.3□□□□□ -1.56
NPLOC4-212ENST00000573328 A0A0G2JQZ4 141 aa5.29□□□□□ -1.56
NPLOC4-212ENST00000573328 PCOTHQ58A44 107 aa5.27□□□□□ -1.57
NPLOC4-212ENST00000573328 C12orf57Q99622 126 aa5.27□□□□□ -1.57
NPLOC4-212ENST00000573328 IGLV8-61A0A075B6I0 122 aa5.26□□□□□ -1.57
NPLOC4-212ENST00000573328 hADV29S1A0JD25 119 aa5.26□□□□□ -1.57
NPLOC4-212ENST00000573328 SCGB1D1O95968 90 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms