RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 S100A12P80511 92 aa7.61□□□□□ -1.19
CNOT1-220ENST00000569916 SMCR5Q8TEV8 140 aa7.61□□□□□ -1.19
CNOT1-220ENST00000569916 C20orf202A1L168 122 aa7.6□□□□□ -1.19
CNOT1-220ENST00000569916 B5MCH6 92 aa7.6□□□□□ -1.19
CNOT1-220ENST00000569916 S100A7L2Q5SY68 101 aa7.6□□□□□ -1.19
CNOT1-220ENST00000569916 C3orf22Q8N5N4 141 aa7.6□□□□□ -1.19
CNOT1-220ENST00000569916 LINC00308Q8TCZ7 52 aa7.6□□□□□ -1.19
CNOT1-220ENST00000569916 ZNF706Q9Y5V0 76 aaPredicted RBP7.6□□□□□ -1.19
CNOT1-220ENST00000569916 ANKRD39Q53RE8 183 aa7.59□□□□□ -1.19
CNOT1-220ENST00000569916 LINC00304Q8N9R0 145 aa7.59□□□□□ -1.19
CNOT1-220ENST00000569916 PRR4Q16378 134 aa7.58□□□□□ -1.2
CNOT1-220ENST00000569916 ATOH7Q8N100 152 aa7.58□□□□□ -1.2
CNOT1-220ENST00000569916 SPANXCQ9NY87 97 aa7.58□□□□□ -1.2
CNOT1-220ENST00000569916 TRAV23DV6A0A075B6W5 121 aa7.57□□□□□ -1.2
CNOT1-220ENST00000569916 Q6ZRX8 168 aa7.57□□□□□ -1.2
CNOT1-220ENST00000569916 HIST3H2BBQ8N257 126 aa7.57□□□□□ -1.2
CNOT1-220ENST00000569916 Q9BRP9 147 aa7.57□□□□□ -1.2
CNOT1-220ENST00000569916 RNF213Q63HN8 5207 aa7.57□□□□□ -1.2
CNOT1-220ENST00000569916 ERC2-IT1O76042 136 aa7.56□□□□□ -1.2
CNOT1-220ENST00000569916 ZNF73O43830 326 aaPredicted RBP7.55□□□□□ -1.2
CNOT1-220ENST00000569916 AKR1D1P51857 326 aa7.55□□□□□ -1.2
CNOT1-220ENST00000569916 LINC00483Q53H64 154 aa7.55□□□□□ -1.2
CNOT1-220ENST00000569916 HIST1H2BLQ99880 126 aa7.55□□□□□ -1.2
CNOT1-220ENST00000569916 PPDPFQ9H3Y8 114 aa7.55□□□□□ -1.2
CNOT1-220ENST00000569916 SCGB1D4Q6XE38 83 aa7.54□□□□□ -1.2
CNOT1-220ENST00000569916 SPANXDQ9BXN6 97 aa7.54□□□□□ -1.2
CNOT1-220ENST00000569916 PCP2Q8IVA1 136 aa7.53□□□□□ -1.2
CNOT1-220ENST00000569916 S100A2P29034 98 aa7.52□□□□□ -1.21
CNOT1-220ENST00000569916 CTAG1AP78358 180 aa7.52□□□□□ -1.21
CNOT1-220ENST00000569916 GAGE2AQ6NT46 116 aa7.52□□□□□ -1.21
CNOT1-220ENST00000569916 OR13C6PQ8NH95 151 aa7.52□□□□□ -1.21
CNOT1-220ENST00000569916 CBY1Q9Y3M2 126 aa7.52□□□□□ -1.21
CNOT1-220ENST00000569916 JOSD1Q15040 202 aaPredicted RBP7.51□□□□□ -1.21
CNOT1-220ENST00000569916 LCE2CQ5TA81 110 aa7.51□□□□□ -1.21
CNOT1-220ENST00000569916 RETNLBQ9BQ08 111 aa7.51□□□□□ -1.21
CNOT1-220ENST00000569916 SNRPEP62304 92 aaKnown RBP7.5□□□□□ -1.21
CNOT1-220ENST00000569916 S100A6P06703 90 aa7.49□□□□□ -1.21
CNOT1-220ENST00000569916 SPAG11AQ6PDA7 123 aa7.49□□□□□ -1.21
CNOT1-220ENST00000569916 LINC00518Q8N0U6 118 aa7.49□□□□□ -1.21
CNOT1-220ENST00000569916 Q8NBF4 154 aa7.49□□□□□ -1.21
CNOT1-220ENST00000569916 IFITM1P13164 125 aa7.48□□□□□ -1.21
CNOT1-220ENST00000569916 HINT1P49773 126 aaPredicted RBP7.48□□□□□ -1.21
CNOT1-220ENST00000569916 C21orf62-AS1Q17RA5 79 aa7.48□□□□□ -1.21
CNOT1-220ENST00000569916 Q6ZVH6 145 aa7.48□□□□□ -1.21
CNOT1-220ENST00000569916 IGLV9-49A0A0B4J1Y8 123 aa7.47□□□□□ -1.21
CNOT1-220ENST00000569916 MOBPQ13875 183 aa7.47□□□□□ -1.21
CNOT1-220ENST00000569916 ST20-AS1Q8NBB2 130 aa7.47□□□□□ -1.21
CNOT1-220ENST00000569916 COPS9Q8WXC6 57 aa7.47□□□□□ -1.21
CNOT1-220ENST00000569916 MUSTN1Q8IVN3 82 aa7.46□□□□□ -1.22
CNOT1-220ENST00000569916 C5orf52A6NGY3 159 aa7.45□□□□□ -1.22
CNOT1-220ENST00000569916 ELOF1P60002 83 aaKnown RBP7.45□□□□□ -1.22
CNOT1-220ENST00000569916 C6orf99Q4VX62 202 aa7.45□□□□□ -1.22
CNOT1-220ENST00000569916 COX7BP24311 80 aa7.44□□□□□ -1.22
CNOT1-220ENST00000569916 SSBP3-AS1Q7Z2R9 100 aa7.44□□□□□ -1.22
CNOT1-220ENST00000569916 DHRS4-AS1Q9P1J3 65 aa7.44□□□□□ -1.22
CNOT1-220ENST00000569916 HSBP1L1C9JCN9 74 aa7.43□□□□□ -1.22
CNOT1-220ENST00000569916 SPINK1P00995 79 aa7.42□□□□□ -1.22
CNOT1-220ENST00000569916 SPRR1BP22528 89 aa7.42□□□□□ -1.22
CNOT1-220ENST00000569916 IGLV7-46A0A075B6I9 117 aa7.41□□□□□ -1.22
CNOT1-220ENST00000569916 TRBV7-6A0A0J9YX20 115 aa7.41□□□□□ -1.22
CNOT1-220ENST00000569916 A6NDN8 102 aa7.41□□□□□ -1.22
CNOT1-220ENST00000569916 TPRXLQ17RH7 258 aa7.41□□□□□ -1.22
CNOT1-220ENST00000569916 C9orf153Q5TBE3 101 aa7.41□□□□□ -1.22
CNOT1-220ENST00000569916 SCGB1D1O95968 90 aa7.4□□□□□ -1.22
CNOT1-220ENST00000569916 TRAV13-2A0A0B4J235 113 aa7.39□□□□□ -1.23
CNOT1-220ENST00000569916 RPS29P62273 56 aaKnown RBP7.39□□□□□ -1.23
CNOT1-220ENST00000569916 LCE2AQ5TA79 106 aaPredicted RBP7.39□□□□□ -1.23
CNOT1-220ENST00000569916 A0A1B0GWB2 263 aa7.38□□□□□ -1.23
CNOT1-220ENST00000569916 FP248Q71RG6 208 aaPredicted RBP7.38□□□□□ -1.23
CNOT1-220ENST00000569916 SMIM11BQ8TCY0 68 aa7.37□□□□□ -1.23
CNOT1-220ENST00000569916 A4D1N5 150 aa7.36□□□□□ -1.23
CNOT1-220ENST00000569916 SMIM6P0DI80 62 aa7.36□□□□□ -1.23
CNOT1-220ENST00000569916 SLC25A34Q6PIV7 304 aa7.36□□□□□ -1.23
CNOT1-220ENST00000569916 Q8N377 158 aa7.36□□□□□ -1.23
CNOT1-220ENST00000569916 CDIP1Q9H305 208 aa7.36□□□□□ -1.23
CNOT1-220ENST00000569916 MUC17Q685J3 4493 aa7.36□□□□□ -1.23
CNOT1-220ENST00000569916 COX8AP10176 69 aa7.35□□□□□ -1.23
CNOT1-220ENST00000569916 MUC2Q02817 5179 aa7.34□□□□□ -1.23
CNOT1-220ENST00000569916 LINC01547P58512 204 aaPredicted RBP7.34□□□□□ -1.23
CNOT1-220ENST00000569916 TAL2Q16559 108 aa7.34□□□□□ -1.23
CNOT1-220ENST00000569916 DEFB105AQ8NG35 78 aa7.34□□□□□ -1.23
CNOT1-220ENST00000569916 LAMTOR3Q9UHA4 124 aa7.34□□□□□ -1.23
CNOT1-220ENST00000569916 IGLV5-48A0A075B6I7 105 aa7.33□□□□□ -1.24
CNOT1-220ENST00000569916 TEX49A0A1B0GTD5 131 aa7.33□□□□□ -1.24
CNOT1-220ENST00000569916 DLEU1O43261 78 aa7.33□□□□□ -1.24
CNOT1-220ENST00000569916 Q1RN00 199 aa7.33□□□□□ -1.24
CNOT1-220ENST00000569916 C12orf57Q99622 126 aa7.33□□□□□ -1.24
CNOT1-220ENST00000569916 SLC25A20O43772 301 aa7.32□□□□□ -1.24
CNOT1-220ENST00000569916 KRTAP13-3Q3SY46 172 aa7.32□□□□□ -1.24
CNOT1-220ENST00000569916 SMIM29Q86T20 159 aa7.32□□□□□ -1.24
CNOT1-220ENST00000569916 LORP23490 312 aaPredicted RBP7.31□□□□□ -1.24
CNOT1-220ENST00000569916 HIST1H4GQ99525 98 aa7.31□□□□□ -1.24
CNOT1-220ENST00000569916 NHP2Q9NX24 153 aaKnown RBP7.31□□□□□ -1.24
CNOT1-220ENST00000569916 SPATA45Q537H7 98 aa7.3□□□□□ -1.24
CNOT1-220ENST00000569916 C14orf144Q96I85 54 aa7.3□□□□□ -1.24
CNOT1-220ENST00000569916 PAM16Q9Y3D7 125 aa7.3□□□□□ -1.24
CNOT1-220ENST00000569916 HRCT1Q6UXD1 115 aa7.29□□□□□ -1.24
CNOT1-220ENST00000569916 H3BS24 57 aa7.28□□□□□ -1.24
CNOT1-220ENST00000569916 LINC00575Q6W349 94 aa7.28□□□□□ -1.24
CNOT1-220ENST00000569916 VAMP8Q9BV40 100 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms