RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 DDTP30046 118 aa8.19□□□□□ -1.1
HERPUD1-218ENST00000569569 LITAFQ99732 161 aa8.19□□□□□ -1.1
HERPUD1-218ENST00000569569 TTTY13Q9BZ97 58 aa8.19□□□□□ -1.1
HERPUD1-218ENST00000569569 FAM229BQ4G0N7 80 aa8.18□□□□□ -1.1
HERPUD1-218ENST00000569569 S100A7L2Q5SY68 101 aa8.18□□□□□ -1.1
HERPUD1-218ENST00000569569 ATOH7Q8N100 152 aa8.18□□□□□ -1.1
HERPUD1-218ENST00000569569 HIST1H2BLQ99880 126 aa8.18□□□□□ -1.1
HERPUD1-218ENST00000569569 KRTAP4-12Q9BQ66 201 aa8.18□□□□□ -1.1
HERPUD1-218ENST00000569569 HIGD2AQ9BW72 106 aa8.18□□□□□ -1.1
HERPUD1-218ENST00000569569 ANAPC11Q9NYG5 84 aa8.18□□□□□ -1.1
HERPUD1-218ENST00000569569 ETDCA0A1B0GVM5 59 aa8.17□□□□□ -1.1
HERPUD1-218ENST00000569569 KRTAP4-16G5E9R7 235 aaPredicted RBP8.17□□□□□ -1.1
HERPUD1-218ENST00000569569 ANKRD39Q53RE8 183 aa8.17□□□□□ -1.1
HERPUD1-218ENST00000569569 LINC00308Q8TCZ7 52 aa8.17□□□□□ -1.1
HERPUD1-218ENST00000569569 SNRPEP62304 92 aaKnown RBP8.16□□□□□ -1.1
HERPUD1-218ENST00000569569 TYMSOSQ8TAI1 123 aa8.16□□□□□ -1.1
HERPUD1-218ENST00000569569 IGLV6-57P01721 117 aa8.15□□□□□ -1.1
HERPUD1-218ENST00000569569 SCGB1D4Q6XE38 83 aa8.15□□□□□ -1.1
HERPUD1-218ENST00000569569 SPANXCQ9NY87 97 aa8.15□□□□□ -1.1
HERPUD1-218ENST00000569569 B5MCH6 92 aa8.13□□□□□ -1.11
HERPUD1-218ENST00000569569 KRTAP13-2Q52LG2 175 aa8.13□□□□□ -1.11
HERPUD1-218ENST00000569569 SMCR5Q8TEV8 140 aa8.13□□□□□ -1.11
HERPUD1-218ENST00000569569 ZNF706Q9Y5V0 76 aaPredicted RBP8.13□□□□□ -1.11
HERPUD1-218ENST00000569569 TRAV23DV6A0A075B6W5 121 aa8.12□□□□□ -1.11
HERPUD1-218ENST00000569569 PCP2Q8IVA1 136 aa8.12□□□□□ -1.11
HERPUD1-218ENST00000569569 SPRR4Q96PI1 79 aa8.12□□□□□ -1.11
HERPUD1-218ENST00000569569 SPANXDQ9BXN6 97 aa8.12□□□□□ -1.11
HERPUD1-218ENST00000569569 KRTAP9-9Q9BYP9 154 aa8.12□□□□□ -1.11
HERPUD1-218ENST00000569569 KRTAP9-4Q9BYQ2 154 aa8.12□□□□□ -1.11
HERPUD1-218ENST00000569569 CBY1Q9Y3M2 126 aa8.12□□□□□ -1.11
HERPUD1-218ENST00000569569 LINC00518Q8N0U6 118 aa8.11□□□□□ -1.11
HERPUD1-218ENST00000569569 COPS9Q8WXC6 57 aa8.11□□□□□ -1.11
HERPUD1-218ENST00000569569 C5orf52A6NGY3 159 aa8.1□□□□□ -1.11
HERPUD1-218ENST00000569569 HSBP1L1C9JCN9 74 aa8.1□□□□□ -1.11
HERPUD1-218ENST00000569569 Q6ZRX8 168 aa8.1□□□□□ -1.11
HERPUD1-218ENST00000569569 Q6ZVH6 145 aa8.1□□□□□ -1.11
HERPUD1-218ENST00000569569 OR13C6PQ8NH95 151 aa8.1□□□□□ -1.11
HERPUD1-218ENST00000569569 ZNF73O43830 326 aaPredicted RBP8.09□□□□□ -1.11
HERPUD1-218ENST00000569569 IFITM1P13164 125 aa8.09□□□□□ -1.11
HERPUD1-218ENST00000569569 TSPAN13O95857 204 aa8.08□□□□□ -1.12
HERPUD1-218ENST00000569569 HINT1P49773 126 aaPredicted RBP8.08□□□□□ -1.12
HERPUD1-218ENST00000569569 JOSD1Q15040 202 aaPredicted RBP8.08□□□□□ -1.12
HERPUD1-218ENST00000569569 PPDPFQ9H3Y8 114 aa8.08□□□□□ -1.12
HERPUD1-218ENST00000569569 Q9BRP9 147 aa8.07□□□□□ -1.12
HERPUD1-218ENST00000569569 LRP2P98164 4655 aa8.06□□□□□ -1.12
HERPUD1-218ENST00000569569 ERC2-IT1O76042 136 aa8.06□□□□□ -1.12
HERPUD1-218ENST00000569569 SCGB1D1O95968 90 aa8.06□□□□□ -1.12
HERPUD1-218ENST00000569569 MUSTN1Q8IVN3 82 aa8.06□□□□□ -1.12
HERPUD1-218ENST00000569569 C3orf22Q8N5N4 141 aa8.06□□□□□ -1.12
HERPUD1-218ENST00000569569 LINC00304Q8N9R0 145 aa8.06□□□□□ -1.12
HERPUD1-218ENST00000569569 KRTAP4-8A0A0G2JLE6 195 aa8.05□□□□□ -1.12
HERPUD1-218ENST00000569569 CTAG1AP78358 180 aa8.04□□□□□ -1.12
HERPUD1-218ENST00000569569 LINC00483Q53H64 154 aa8.04□□□□□ -1.12
HERPUD1-218ENST00000569569 GAGE2AQ6NT46 116 aa8.04□□□□□ -1.12
HERPUD1-218ENST00000569569 UBR4Q5T4S7 5183 aa8.03□□□□□ -1.12
HERPUD1-218ENST00000569569 PRR4Q16378 134 aa8.02□□□□□ -1.13
HERPUD1-218ENST00000569569 SPAG11AQ6PDA7 123 aa8.01□□□□□ -1.13
HERPUD1-218ENST00000569569 LPAP08519 4548 aa8□□□□□ -1.13
HERPUD1-218ENST00000569569 A6NDN8 102 aa8□□□□□ -1.13
HERPUD1-218ENST00000569569 C6orf99Q4VX62 202 aa8□□□□□ -1.13
HERPUD1-218ENST00000569569 DHRS4-AS1Q9P1J3 65 aa8□□□□□ -1.13
HERPUD1-218ENST00000569569 COX7BP24311 80 aa7.99□□□□□ -1.13
HERPUD1-218ENST00000569569 ELOF1P60002 83 aaKnown RBP7.99□□□□□ -1.13
HERPUD1-218ENST00000569569 TRAV13-2A0A0B4J235 113 aa7.98□□□□□ -1.13
HERPUD1-218ENST00000569569 IGLV9-49A0A0B4J1Y8 123 aa7.97□□□□□ -1.13
HERPUD1-218ENST00000569569 TRBV7-6A0A0J9YX20 115 aa7.97□□□□□ -1.13
HERPUD1-218ENST00000569569 COX8AP10176 69 aa7.97□□□□□ -1.13
HERPUD1-218ENST00000569569 SSBP3-AS1Q7Z2R9 100 aa7.97□□□□□ -1.13
HERPUD1-218ENST00000569569 ST20-AS1Q8NBB2 130 aa7.97□□□□□ -1.13
HERPUD1-218ENST00000569569 Q8NBF4 154 aa7.97□□□□□ -1.13
HERPUD1-218ENST00000569569 A0A1B0GWB2 263 aa7.95□□□□□ -1.14
HERPUD1-218ENST00000569569 DLEU1O43261 78 aa7.95□□□□□ -1.14
HERPUD1-218ENST00000569569 MOBPQ13875 183 aa7.95□□□□□ -1.14
HERPUD1-218ENST00000569569 A4D1N5 150 aa7.94□□□□□ -1.14
HERPUD1-218ENST00000569569 SPRR1BP22528 89 aa7.94□□□□□ -1.14
HERPUD1-218ENST00000569569 RETNLBQ9BQ08 111 aa7.94□□□□□ -1.14
HERPUD1-218ENST00000569569 SPINK1P00995 79 aa7.93□□□□□ -1.14
HERPUD1-218ENST00000569569 KRTAP19-1Q8IUB9 90 aa7.93□□□□□ -1.14
HERPUD1-218ENST00000569569 SMIM11BQ8TCY0 68 aa7.93□□□□□ -1.14
HERPUD1-218ENST00000569569 HIST1H4GQ99525 98 aa7.93□□□□□ -1.14
HERPUD1-218ENST00000569569 PAM16Q9Y3D7 125 aa7.93□□□□□ -1.14
HERPUD1-218ENST00000569569 SPATA45Q537H7 98 aa7.92□□□□□ -1.14
HERPUD1-218ENST00000569569 C9orf153Q5TBE3 101 aa7.92□□□□□ -1.14
HERPUD1-218ENST00000569569 SLC25A34Q6PIV7 304 aa7.92□□□□□ -1.14
HERPUD1-218ENST00000569569 C14orf144Q96I85 54 aa7.92□□□□□ -1.14
HERPUD1-218ENST00000569569 VAMP8Q9BV40 100 aa7.92□□□□□ -1.14
HERPUD1-218ENST00000569569 TAL2Q16559 108 aa7.91□□□□□ -1.14
HERPUD1-218ENST00000569569 C21orf62-AS1Q17RA5 79 aa7.9□□□□□ -1.14
HERPUD1-218ENST00000569569 LAMTOR3Q9UHA4 124 aa7.9□□□□□ -1.14
HERPUD1-218ENST00000569569 VAMP3Q15836 100 aa7.89□□□□□ -1.15
HERPUD1-218ENST00000569569 NHP2Q9NX24 153 aaKnown RBP7.89□□□□□ -1.15
HERPUD1-218ENST00000569569 HIGD1BQ9P298 99 aa7.89□□□□□ -1.15
HERPUD1-218ENST00000569569 TEX49A0A1B0GTD5 131 aa7.88□□□□□ -1.15
HERPUD1-218ENST00000569569 RPS29P62273 56 aaKnown RBP7.88□□□□□ -1.15
HERPUD1-218ENST00000569569 DEFB105AQ8NG35 78 aa7.88□□□□□ -1.15
HERPUD1-218ENST00000569569 IGLV7-46A0A075B6I9 117 aa7.87□□□□□ -1.15
HERPUD1-218ENST00000569569 SLC25A20O43772 301 aa7.86□□□□□ -1.15
HERPUD1-218ENST00000569569 C12orf57Q99622 126 aa7.86□□□□□ -1.15
HERPUD1-218ENST00000569569 FP248Q71RG6 208 aaPredicted RBP7.85□□□□□ -1.15
HERPUD1-218ENST00000569569 IGLV5-48A0A075B6I7 105 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms