RNA–Protein interactions for RNA: ENST00000568454.5

TSC2-222, Transcript of TSC complex subunit 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TSC2, Length 5,434 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-222ENST00000568454 C15orf56Q8N910 161 aa10.92□□□□□ -0.66
TSC2-222ENST00000568454 PLA2G1BP04054 148 aaKnown RBP10.92□□□□□ -0.66
TSC2-222ENST00000568454 CDC42SE1Q9NRR8 79 aa10.91□□□□□ -0.66
TSC2-222ENST00000568454 DSCR10P59022 87 aa10.9□□□□□ -0.67
TSC2-222ENST00000568454 OBSCN-AS1Q96MR7 158 aa10.89□□□□□ -0.67
TSC2-222ENST00000568454 TLX1NBP0CAT3 122 aa10.89□□□□□ -0.67
TSC2-222ENST00000568454 PCSK5Q92824 1860 aa10.85□□□□□ -0.67
TSC2-222ENST00000568454 A0A1W2PNM2 257 aa10.85□□□□□ -0.67
TSC2-222ENST00000568454 LINC00612Q8N6U2 182 aa10.85□□□□□ -0.67
TSC2-222ENST00000568454 Q1T7F1 81 aa10.84□□□□□ -0.67
TSC2-222ENST00000568454 APLNQ9ULZ1 77 aa10.84□□□□□ -0.67
TSC2-222ENST00000568454 GOLGB1Q14789 3259 aaKnown RBP10.82□□□□□ -0.68
TSC2-222ENST00000568454 ZNF861PO60384 105 aa10.81□□□□□ -0.68
TSC2-222ENST00000568454 A0A0G2JQZ4 141 aa10.8□□□□□ -0.68
TSC2-222ENST00000568454 A0A1W2PNN7 141 aa10.8□□□□□ -0.68
TSC2-222ENST00000568454 OCR1Q9BZK8 76 aa10.8□□□□□ -0.68
TSC2-222ENST00000568454 GIG44P09565 113 aaPredicted RBP10.8□□□□□ -0.68
TSC2-222ENST00000568454 MTORP42345 2549 aa10.8□□□□□ -0.68
TSC2-222ENST00000568454 IGLV5-48A0A075B6I7 105 aa10.79□□□□□ -0.68
TSC2-222ENST00000568454 KRTAP24-1Q3LI83 254 aa10.79□□□□□ -0.68
TSC2-222ENST00000568454 F8P00451 2351 aa10.78□□□□□ -0.68
TSC2-222ENST00000568454 FAM104AQ969W3 186 aa10.77□□□□□ -0.69
TSC2-222ENST00000568454 C19orf73Q9NVV2 129 aa10.75□□□□□ -0.69
TSC2-222ENST00000568454 CHD8Q9HCK8 2581 aa10.75□□□□□ -0.69
TSC2-222ENST00000568454 SPTBN4Q9H254 2564 aa10.73□□□□□ -0.69
TSC2-222ENST00000568454 C9orf163Q8N9P6 203 aa10.72□□□□□ -0.69
TSC2-222ENST00000568454 LINC00304Q8N9R0 145 aa10.71□□□□□ -0.69
TSC2-222ENST00000568454 SPRR4Q96PI1 79 aa10.7□□□□□ -0.7
TSC2-222ENST00000568454 IGLV5-37A0A075B6J1 123 aa10.69□□□□□ -0.7
TSC2-222ENST00000568454 Q75L30 129 aa10.66□□□□□ -0.7
TSC2-222ENST00000568454 ANKRD17O75179 2603 aaKnown RBP10.65□□□□□ -0.71
TSC2-222ENST00000568454 IGLV7-46A0A075B6I9 117 aa10.64□□□□□ -0.71
TSC2-222ENST00000568454 CNBPP62633 177 aaKnown RBP10.64□□□□□ -0.71
TSC2-222ENST00000568454 Q5XG85 94 aa10.64□□□□□ -0.71
TSC2-222ENST00000568454 PRR26Q8N8Z3 221 aa10.64□□□□□ -0.71
TSC2-222ENST00000568454 RBM12B-AS1Q9P1G2 102 aa10.63□□□□□ -0.71
TSC2-222ENST00000568454 IGLV7-43P04211 117 aa10.62□□□□□ -0.71
TSC2-222ENST00000568454 A0A087WTM6 91 aa10.62□□□□□ -0.71
TSC2-222ENST00000568454 C9orf92A6NGG3 77 aa10.61□□□□□ -0.71
TSC2-222ENST00000568454 ZNF575Q86XF7 245 aa10.61□□□□□ -0.71
TSC2-222ENST00000568454 ANAPC11Q9NYG5 84 aa10.6□□□□□ -0.71
TSC2-222ENST00000568454 POLQO75417 2590 aa10.6□□□□□ -0.71
TSC2-222ENST00000568454 KRTAP10-11P60412 298 aa10.59□□□□□ -0.71
TSC2-222ENST00000568454 PSORS1C2Q9UIG4 136 aa10.59□□□□□ -0.71
TSC2-222ENST00000568454 A0A096LNT2 108 aa10.59□□□□□ -0.71
TSC2-222ENST00000568454 Q8N1X5 172 aa10.59□□□□□ -0.71
TSC2-222ENST00000568454 WWC2-AS2Q96NR7 200 aa10.58□□□□□ -0.72
TSC2-222ENST00000568454 A0A0D9SG42 100 aa10.56□□□□□ -0.72
TSC2-222ENST00000568454 DNAH12Q6ZR08 3092 aa10.56□□□□□ -0.72
TSC2-222ENST00000568454 K7EIL1 84 aa10.55□□□□□ -0.72
TSC2-222ENST00000568454 LINC01558Q9Y6Z2 57 aa10.55□□□□□ -0.72
TSC2-222ENST00000568454 ACANP16112 2415 aa10.55□□□□□ -0.72
TSC2-222ENST00000568454 CASC10Q5T4H9 136 aa10.55□□□□□ -0.72
TSC2-222ENST00000568454 FP248Q71RG6 208 aaPredicted RBP10.54□□□□□ -0.72
TSC2-222ENST00000568454 Q8N9P0 234 aaPredicted RBP10.53□□□□□ -0.72
TSC2-222ENST00000568454 LINC01554Q52M75 96 aa10.53□□□□□ -0.72
TSC2-222ENST00000568454 LUZP6Q538Z0 58 aa10.53□□□□□ -0.72
TSC2-222ENST00000568454 FAM229BQ4G0N7 80 aa10.51□□□□□ -0.73
TSC2-222ENST00000568454 COX6B2Q6YFQ2 88 aa10.51□□□□□ -0.73
TSC2-222ENST00000568454 KRTAP10-3P60369 221 aa10.49□□□□□ -0.73
TSC2-222ENST00000568454 CYSTM1Q9H1C7 97 aa10.48□□□□□ -0.73
TSC2-222ENST00000568454 HRES1P13985 223 aa10.47□□□□□ -0.73
TSC2-222ENST00000568454 A0A1B0GU33 70 aa10.47□□□□□ -0.73
TSC2-222ENST00000568454 CR1P17927 2039 aa10.42□□□□□ -0.74
TSC2-222ENST00000568454 MMP24-AS1A0A0U1RRL7 71 aa10.42□□□□□ -0.74
TSC2-222ENST00000568454 Q5VV11 94 aa10.42□□□□□ -0.74
TSC2-222ENST00000568454 FASNP49327 2511 aaKnown RBP10.39□□□□□ -0.75
TSC2-222ENST00000568454 J3QL48 77 aa10.38□□□□□ -0.75
TSC2-222ENST00000568454 PRRC2CQ9Y520 2896 aaKnown RBP10.38□□□□□ -0.75
TSC2-222ENST00000568454 PRAC1Q96KF2 57 aa10.37□□□□□ -0.75
TSC2-222ENST00000568454 H3BS24 57 aa10.37□□□□□ -0.75
TSC2-222ENST00000568454 CEP350Q5VT06 3117 aa10.36□□□□□ -0.75
TSC2-222ENST00000568454 SPRR1AP35321 89 aa10.33□□□□□ -0.76
TSC2-222ENST00000568454 SMR3BP02814 79 aaPredicted RBP10.32□□□□□ -0.76
TSC2-222ENST00000568454 EPG5Q9HCE0 2579 aa10.32□□□□□ -0.76
TSC2-222ENST00000568454 Q8NDZ9 215 aa10.3□□□□□ -0.76
TSC2-222ENST00000568454 DMAC1Q96GE9 116 aa10.3□□□□□ -0.76
TSC2-222ENST00000568454 OXTP01178 125 aa10.29□□□□□ -0.76
TSC2-222ENST00000568454 SPINK7P58062 85 aa10.28□□□□□ -0.76
TSC2-222ENST00000568454 CSAG1Q6PB30 78 aa10.27□□□□□ -0.77
TSC2-222ENST00000568454 KRTAP1-3Q8IUG1 177 aa10.26□□□□□ -0.77
TSC2-222ENST00000568454 LINC00472Q9H8W2 130 aa10.26□□□□□ -0.77
TSC2-222ENST00000568454 SPRR1BP22528 89 aa10.25□□□□□ -0.77
TSC2-222ENST00000568454 LINC00483Q53H64 154 aa10.24□□□□□ -0.77
TSC2-222ENST00000568454 ZCCHC13Q8WW36 166 aaKnown RBP10.24□□□□□ -0.77
TSC2-222ENST00000568454 CHD7Q9P2D1 2997 aa10.23□□□□□ -0.77
TSC2-222ENST00000568454 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.22□□□□□ -0.77
TSC2-222ENST00000568454 Q5W150 140 aa10.22□□□□□ -0.77
TSC2-222ENST00000568454 USP24Q9UPU5 2620 aa10.21□□□□□ -0.77
TSC2-222ENST00000568454 CAMK2N1Q7Z7J9 78 aa10.21□□□□□ -0.78
TSC2-222ENST00000568454 UTRNP46939 3433 aa10.2□□□□□ -0.78
TSC2-222ENST00000568454 KRTAP1-1Q07627 177 aa10.19□□□□□ -0.78
TSC2-222ENST00000568454 A0A0A0MQY5 61 aa10.18□□□□□ -0.78
TSC2-222ENST00000568454 Q6ZSA8 131 aa10.16□□□□□ -0.78
TSC2-222ENST00000568454 PLAC8Q9NZF1 115 aa10.13□□□□□ -0.79
TSC2-222ENST00000568454 ASB16-AS1Q495Z4 193 aa10.12□□□□□ -0.79
TSC2-222ENST00000568454 TNP2Q05952 138 aa10.12□□□□□ -0.79
TSC2-222ENST00000568454 BPTFQ12830 3046 aa10.12□□□□□ -0.79
TSC2-222ENST00000568454 CHD9Q3L8U1 2897 aa10.11□□□□□ -0.79
TSC2-222ENST00000568454 MGAM2Q2M2H8 2515 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms