RNA–Protein interactions for RNA: ENST00000568186.5

TCF4-239, Transcript of transcription factor 4, humanhuman

TSL 2

Gene TCF4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-239ENST00000568186 DDX60Q8IY21 1712 aaKnown RBP0.75□□□□□ -2.29
TCF4-239ENST00000568186 TOGARAM1Q9Y4F4 1720 aa0.75□□□□□ -2.29
TCF4-239ENST00000568186 CPSF4LA6NMK7 179 aaKnown RBP0.75□□□□□ -2.29
TCF4-239ENST00000568186 C3orf79P0CE67 100 aa0.75□□□□□ -2.29
TCF4-239ENST00000568186 MEGF8Q7Z7M0 2845 aa0.75□□□□□ -2.29
TCF4-239ENST00000568186 ZNF462Q96JM2 2506 aa0.75□□□□□ -2.29
TCF4-239ENST00000568186 NRXN3Q9Y4C0 1643 aa0.75□□□□□ -2.29
TCF4-239ENST00000568186 NWD1Q149M9 1564 aa0.74□□□□□ -2.29
TCF4-239ENST00000568186 I3L3M4 83 aa0.74□□□□□ -2.29
TCF4-239ENST00000568186 NDUFA4O00483 81 aa0.74□□□□□ -2.29
TCF4-239ENST00000568186 FXYD6Q9H0Q3 95 aa0.74□□□□□ -2.29
TCF4-239ENST00000568186 FAM208AQ9UK61 1670 aaKnown RBP0.73□□□□□ -2.29
TCF4-239ENST00000568186 IQGAP2Q13576 1575 aa0.73□□□□□ -2.29
TCF4-239ENST00000568186 C4AP0C0L4 1744 aa0.72□□□□□ -2.29
TCF4-239ENST00000568186 C4BP0C0L5 1744 aa0.72□□□□□ -2.29
TCF4-239ENST00000568186 SNRPGP15A8MWD9 76 aa0.72□□□□□ -2.29
TCF4-239ENST00000568186 COX6B1P14854 86 aa0.72□□□□□ -2.29
TCF4-239ENST00000568186 Q5VSD8 79 aa0.72□□□□□ -2.29
TCF4-239ENST00000568186 MRPL34Q9BQ48 92 aaKnown RBP0.72□□□□□ -2.29
TCF4-239ENST00000568186 CACNA1HO95180 2353 aa0.72□□□□□ -2.29
TCF4-239ENST00000568186 KIAA0586Q9BVV6 1533 aa0.72□□□□□ -2.29
TCF4-239ENST00000568186 URB1O60287 2271 aaKnown RBP0.72□□□□□ -2.29
TCF4-239ENST00000568186 CACNA1EQ15878 2313 aa0.71□□□□□ -2.3
TCF4-239ENST00000568186 ABCC6O95255 1503 aa0.71□□□□□ -2.3
TCF4-239ENST00000568186 CPS1P31327 1500 aa0.71□□□□□ -2.3
TCF4-239ENST00000568186 ENHOQ6UWT2 76 aa0.71□□□□□ -2.3
TCF4-239ENST00000568186 TTC28Q96AY4 2481 aa0.7□□□□□ -2.3
TCF4-239ENST00000568186 IQGAP1P46940 1657 aa0.7□□□□□ -2.3
TCF4-239ENST00000568186 TNRC6CQ9HCJ0 1690 aaKnown RBP0.7□□□□□ -2.3
TCF4-239ENST00000568186 LINC01549A6NIU2 74 aa0.7□□□□□ -2.3
TCF4-239ENST00000568186 SPRR1AP35321 89 aa0.7□□□□□ -2.3
TCF4-239ENST00000568186 KRTAP19-3Q7Z4W3 81 aa0.7□□□□□ -2.3
TCF4-239ENST00000568186 ADCY10Q96PN6 1610 aa0.7□□□□□ -2.3
TCF4-239ENST00000568186 EFCAB6Q5THR3 1501 aa0.69□□□□□ -2.3
TCF4-239ENST00000568186 TNCP24821 2201 aa0.69□□□□□ -2.3
TCF4-239ENST00000568186 COL6A3P12111 3177 aa0.69□□□□□ -2.3
TCF4-239ENST00000568186 FCER1GP30273 86 aa0.69□□□□□ -2.3
TCF4-239ENST00000568186 TRPM2O94759 1503 aa0.69□□□□□ -2.3
TCF4-239ENST00000568186 CCL22O00626 93 aa0.68□□□□□ -2.3
TCF4-239ENST00000568186 PRH1P02810 166 aa0.68□□□□□ -2.3
TCF4-239ENST00000568186 ABCC8Q09428 1581 aa0.68□□□□□ -2.3
TCF4-239ENST00000568186 NCBP2-AS2Q69YL0 99 aa0.68□□□□□ -2.3
TCF4-239ENST00000568186 TOMM5Q8N4H5 51 aa0.68□□□□□ -2.3
TCF4-239ENST00000568186 UBL5Q9BZL1 73 aa0.68□□□□□ -2.3
TCF4-239ENST00000568186 KCNQ1DNQ9H478 68 aa0.68□□□□□ -2.3
TCF4-239ENST00000568186 C2CD3Q4AC94 2353 aa0.68□□□□□ -2.3
TCF4-239ENST00000568186 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.67□□□□□ -2.3
TCF4-239ENST00000568186 NOTCH1P46531 2555 aa0.67□□□□□ -2.3
TCF4-239ENST00000568186 SPRR1BP22528 89 aa0.67□□□□□ -2.3
TCF4-239ENST00000568186 PLCE1Q9P212 2302 aa0.67□□□□□ -2.3
TCF4-239ENST00000568186 AGLP35573 1532 aa0.67□□□□□ -2.3
TCF4-239ENST00000568186 SPTBN2O15020 2390 aa0.67□□□□□ -2.3
TCF4-239ENST00000568186 DOPEY2Q9Y3R5 2298 aa0.66□□□□□ -2.3
TCF4-239ENST00000568186 K7EMI3 77 aa0.66□□□□□ -2.3
TCF4-239ENST00000568186 LELP1Q5T871 98 aa0.66□□□□□ -2.3
TCF4-239ENST00000568186 COX6B2Q6YFQ2 88 aa0.66□□□□□ -2.3
TCF4-239ENST00000568186 DEFB105AQ8NG35 78 aa0.66□□□□□ -2.3
TCF4-239ENST00000568186 NMES1Q9C002 83 aa0.66□□□□□ -2.3
TCF4-239ENST00000568186 KIF21BO75037 1637 aa0.66□□□□□ -2.3
TCF4-239ENST00000568186 USF3Q68DE3 2245 aa0.66□□□□□ -2.3
TCF4-239ENST00000568186 GCC2Q8IWJ2 1684 aa0.65□□□□□ -2.3
TCF4-239ENST00000568186 TENM3Q9P273 2699 aa0.65□□□□□ -2.3
TCF4-239ENST00000568186 AHNAK2Q8IVF2 5795 aa0.65□□□□□ -2.31
TCF4-239ENST00000568186 DEPDC5O75140 1603 aa0.65□□□□□ -2.31
TCF4-239ENST00000568186 H1FX-AS1Q4G0G2 97 aa0.65□□□□□ -2.31
TCF4-239ENST00000568186 SPINK6Q6UWN8 80 aa0.65□□□□□ -2.31
TCF4-239ENST00000568186 CMC2Q9NRP2 79 aa0.65□□□□□ -2.31
TCF4-239ENST00000568186 APLNQ9ULZ1 77 aa0.65□□□□□ -2.31
TCF4-239ENST00000568186 MROH2BQ7Z745 1585 aa0.65□□□□□ -2.31
TCF4-239ENST00000568186 PTPRZ1P23471 2315 aaPredicted RBP0.65□□□□□ -2.31
TCF4-239ENST00000568186 LMO7Q8WWI1 1683 aa0.65□□□□□ -2.31
TCF4-239ENST00000568186 NFAT5O94916 1531 aa0.64□□□□□ -2.31
TCF4-239ENST00000568186 PIEZO2Q9H5I5 2752 aa0.64□□□□□ -2.31
TCF4-239ENST00000568186 BPTFQ12830 3046 aa0.64□□□□□ -2.31
TCF4-239ENST00000568186 PCLOQ9Y6V0 5065 aa0.64□□□□□ -2.31
TCF4-239ENST00000568186 DEFB131BA0A096LNP1 70 aa0.64□□□□□ -2.31
TCF4-239ENST00000568186 M0R1W7 72 aa0.64□□□□□ -2.31
TCF4-239ENST00000568186 NDUFA3O95167 84 aa0.64□□□□□ -2.31
TCF4-239ENST00000568186 DEFB114Q30KQ6 69 aa0.64□□□□□ -2.31
TCF4-239ENST00000568186 ABRACLQ9P1F3 81 aa0.64□□□□□ -2.31
TCF4-239ENST00000568186 POLQO75417 2590 aa0.64□□□□□ -2.31
TCF4-239ENST00000568186 UBR4Q5T4S7 5183 aa0.63□□□□□ -2.31
TCF4-239ENST00000568186 PTPRQQ9UMZ3 2332 aa0.63□□□□□ -2.31
TCF4-239ENST00000568186 ETDCA0A1B0GVM5 59 aa0.63□□□□□ -2.31
TCF4-239ENST00000568186 MRPL33O75394 65 aaKnown RBP0.63□□□□□ -2.31
TCF4-239ENST00000568186 KRTAP2-3P0C7H8 128 aa0.63□□□□□ -2.31
TCF4-239ENST00000568186 PLNP26678 52 aa0.63□□□□□ -2.31
TCF4-239ENST00000568186 SERF2P84101 59 aa0.63□□□□□ -2.31
TCF4-239ENST00000568186 KLK9Q2XQG4 91 aa0.63□□□□□ -2.31
TCF4-239ENST00000568186 KRTAP2-4Q9BYR9 128 aa0.63□□□□□ -2.31
TCF4-239ENST00000568186 KRTAP2-1Q9BYU5 128 aa0.63□□□□□ -2.31
TCF4-239ENST00000568186 CDKN2A-AS1Q9UH64 79 aa0.63□□□□□ -2.31
TCF4-239ENST00000568186 CNOT1A5YKK6 2376 aaKnown RBP0.62□□□□□ -2.31
TCF4-239ENST00000568186 SMIM27A0A1W2PRY6 76 aa0.62□□□□□ -2.31
TCF4-239ENST00000568186 TIMM8BQ9Y5J9 83 aaPredicted RBP0.62□□□□□ -2.31
TCF4-239ENST00000568186 ATP7AQ04656 1500 aa0.62□□□□□ -2.31
TCF4-239ENST00000568186 ZNF469Q96JG9 3925 aaPredicted RBP0.62□□□□□ -2.31
TCF4-239ENST00000568186 IGIPA6NJ69 53 aa0.61□□□□□ -2.31
TCF4-239ENST00000568186 SPINK4O60575 86 aa0.61□□□□□ -2.31
TCF4-239ENST00000568186 PRO3102Q9H379 93 aa0.61□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms