RNA–Protein interactions for RNA: ENST00000568139.5

CLK3-221, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 918 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-221ENST00000568139 MIEN1Q9BRT3 115 aa9.51□□□□□ -0.89
CLK3-221ENST00000568139 SPRR1BP22528 89 aa9.49□□□□□ -0.89
CLK3-221ENST00000568139 J3QQQ9 107 aa9.48□□□□□ -0.89
CLK3-221ENST00000568139 HRCT1Q6UXD1 115 aa9.48□□□□□ -0.89
CLK3-221ENST00000568139 NMUP48645 174 aa9.47□□□□□ -0.89
CLK3-221ENST00000568139 SOSTDC1Q6X4U4 206 aa9.47□□□□□ -0.89
CLK3-221ENST00000568139 H0Y8G0 127 aa9.46□□□□□ -0.9
CLK3-221ENST00000568139 EIF4EBP3O60516 100 aaPredicted RBP9.46□□□□□ -0.9
CLK3-221ENST00000568139 HSBP1O75506 76 aa9.46□□□□□ -0.9
CLK3-221ENST00000568139 SLC25A34Q6PIV7 304 aa9.46□□□□□ -0.9
CLK3-221ENST00000568139 HINT1P49773 126 aaPredicted RBP9.45□□□□□ -0.9
CLK3-221ENST00000568139 PLNP26678 52 aa9.44□□□□□ -0.9
CLK3-221ENST00000568139 LGALS3P17931 250 aaKnown RBP9.43□□□□□ -0.9
CLK3-221ENST00000568139 YPEL4Q96NS1 127 aa9.43□□□□□ -0.9
CLK3-221ENST00000568139 CBY1Q9Y3M2 126 aa9.43□□□□□ -0.9
CLK3-221ENST00000568139 HERVK_113P61574 105 aa9.42□□□□□ -0.9
CLK3-221ENST00000568139 NPC2P61916 151 aa9.42□□□□□ -0.9
CLK3-221ENST00000568139 CD164Q04900 197 aa9.42□□□□□ -0.9
CLK3-221ENST00000568139 ADAMTSL4-AS1Q5T5F5 129 aa9.42□□□□□ -0.9
CLK3-221ENST00000568139 LAMTOR3Q9UHA4 124 aa9.42□□□□□ -0.9
CLK3-221ENST00000568139 M0R2T5 61 aa9.41□□□□□ -0.9
CLK3-221ENST00000568139 LEPROTL1O95214 131 aa9.41□□□□□ -0.9
CLK3-221ENST00000568139 APOC3P02656 99 aa9.41□□□□□ -0.9
CLK3-221ENST00000568139 DHRS4-AS1Q9P1J3 65 aa9.41□□□□□ -0.9
CLK3-221ENST00000568139 SNAPINO95295 136 aa9.4□□□□□ -0.9
CLK3-221ENST00000568139 A0A0J9YXY3 114 aa9.39□□□□□ -0.91
CLK3-221ENST00000568139 DPM2O94777 84 aa9.39□□□□□ -0.91
CLK3-221ENST00000568139 Q5XG85 94 aa9.38□□□□□ -0.91
CLK3-221ENST00000568139 IGKCP01834 107 aa9.37□□□□□ -0.91
CLK3-221ENST00000568139 SVBPQ8N300 66 aa9.37□□□□□ -0.91
CLK3-221ENST00000568139 PMCHL2Q9BQD1 86 aa9.37□□□□□ -0.91
CLK3-221ENST00000568139 FLGP20930 4061 aaPredicted RBP9.37□□□□□ -0.91
CLK3-221ENST00000568139 LINC00310P59036 64 aa9.36□□□□□ -0.91
CLK3-221ENST00000568139 RPL37P61927 97 aaKnown RBP9.36□□□□□ -0.91
CLK3-221ENST00000568139 PRO1933Q9H354 126 aa9.36□□□□□ -0.91
CLK3-221ENST00000568139 C1orf195Q5TG92 126 aa9.35□□□□□ -0.91
CLK3-221ENST00000568139 COX6B2Q6YFQ2 88 aa9.35□□□□□ -0.91
CLK3-221ENST00000568139 OR13C6PQ8NH95 151 aa9.35□□□□□ -0.91
CLK3-221ENST00000568139 SPANXCQ9NY87 97 aa9.35□□□□□ -0.91
CLK3-221ENST00000568139 H7C2G1 150 aa9.34□□□□□ -0.91
CLK3-221ENST00000568139 Q1RN00 199 aa9.34□□□□□ -0.91
CLK3-221ENST00000568139 HSPB8Q9UJY1 196 aa9.34□□□□□ -0.91
CLK3-221ENST00000568139 SERF1AO75920 110 aa9.33□□□□□ -0.92
CLK3-221ENST00000568139 ELOF1P60002 83 aaKnown RBP9.33□□□□□ -0.92
CLK3-221ENST00000568139 TAL2Q16559 108 aa9.33□□□□□ -0.92
CLK3-221ENST00000568139 NDUFA5Q16718 116 aa9.33□□□□□ -0.92
CLK3-221ENST00000568139 LINC00308Q8TCZ7 52 aa9.33□□□□□ -0.92
CLK3-221ENST00000568139 E9PLD3 99 aa9.32□□□□□ -0.92
CLK3-221ENST00000568139 LITAFQ99732 161 aa9.32□□□□□ -0.92
CLK3-221ENST00000568139 TEX49A0A1B0GTD5 131 aa9.31□□□□□ -0.92
CLK3-221ENST00000568139 FABP4P15090 132 aa9.31□□□□□ -0.92
CLK3-221ENST00000568139 COX7BP24311 80 aa9.31□□□□□ -0.92
CLK3-221ENST00000568139 DEFB105AQ8NG35 78 aa9.31□□□□□ -0.92
CLK3-221ENST00000568139 SPANXDQ9BXN6 97 aa9.31□□□□□ -0.92
CLK3-221ENST00000568139 AKR1D1P51857 326 aa9.3□□□□□ -0.92
CLK3-221ENST00000568139 SMIM29Q86T20 159 aa9.3□□□□□ -0.92
CLK3-221ENST00000568139 TRGC2P03986 189 aa9.29□□□□□ -0.92
CLK3-221ENST00000568139 C6orf99Q4VX62 202 aa9.29□□□□□ -0.92
CLK3-221ENST00000568139 TIMM17BO60830 172 aa9.28□□□□□ -0.92
CLK3-221ENST00000568139 A0A0G2JQZ4 141 aa9.25□□□□□ -0.93
CLK3-221ENST00000568139 LINC00518Q8N0U6 118 aa9.25□□□□□ -0.93
CLK3-221ENST00000568139 TRBV7-6A0A0J9YX20 115 aa9.24□□□□□ -0.93
CLK3-221ENST00000568139 IGLV5-48A0A075B6I7 105 aa9.23□□□□□ -0.93
CLK3-221ENST00000568139 KRTAP9-7A8MTY7 169 aa9.21□□□□□ -0.94
CLK3-221ENST00000568139 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.21□□□□□ -0.94
CLK3-221ENST00000568139 A0A1B0GWB2 263 aa9.19□□□□□ -0.94
CLK3-221ENST00000568139 TCL1BO95988 128 aa9.19□□□□□ -0.94
CLK3-221ENST00000568139 ZNF815PA8K554 130 aa9.18□□□□□ -0.94
CLK3-221ENST00000568139 SYS1-DBNDD2H3BUS1 97 aa9.16□□□□□ -0.94
CLK3-221ENST00000568139 TTTY13Q9BZ97 58 aa9.15□□□□□ -0.94
CLK3-221ENST00000568139 Q6Q795 121 aa9.14□□□□□ -0.95
CLK3-221ENST00000568139 LINC01545Q5VT33 79 aa9.13□□□□□ -0.95
CLK3-221ENST00000568139 A4D1N5 150 aa9.12□□□□□ -0.95
CLK3-221ENST00000568139 A6NDN8 102 aa9.1□□□□□ -0.95
CLK3-221ENST00000568139 CFC1P0CG37 223 aa9.1□□□□□ -0.95
CLK3-221ENST00000568139 ATP11AUNQ6ZP68 121 aa9.1□□□□□ -0.95
CLK3-221ENST00000568139 Q75L30 129 aa9.1□□□□□ -0.95
CLK3-221ENST00000568139 KRTAP9-8Q9BYQ0 159 aa9.1□□□□□ -0.95
CLK3-221ENST00000568139 PCP2Q8IVA1 136 aa9.09□□□□□ -0.95
CLK3-221ENST00000568139 NHP2Q9NX24 153 aaKnown RBP9.09□□□□□ -0.95
CLK3-221ENST00000568139 COLCA2A8K830 154 aa9.08□□□□□ -0.96
CLK3-221ENST00000568139 IFITM1P13164 125 aa9.08□□□□□ -0.96
CLK3-221ENST00000568139 PET117Q6UWS5 81 aa9.08□□□□□ -0.96
CLK3-221ENST00000568139 COPS9Q8WXC6 57 aa9.08□□□□□ -0.96
CLK3-221ENST00000568139 SCGB1D4Q6XE38 83 aa9.06□□□□□ -0.96
CLK3-221ENST00000568139 OBSCN-AS1Q96MR7 158 aa9.06□□□□□ -0.96
CLK3-221ENST00000568139 F8WEM9 126 aa9.05□□□□□ -0.96
CLK3-221ENST00000568139 TRBV7-7A0A0K0K1E9 115 aa9.04□□□□□ -0.96
CLK3-221ENST00000568139 Q6ZVH6 145 aa9.04□□□□□ -0.96
CLK3-221ENST00000568139 SMIM11BQ8TCY0 68 aa9.04□□□□□ -0.96
CLK3-221ENST00000568139 SSPOA2VEC9 5147 aa9.04□□□□□ -0.96
CLK3-221ENST00000568139 Q6JHZ5 121 aa9.03□□□□□ -0.96
CLK3-221ENST00000568139 MUSTN1Q8IVN3 82 aa9.03□□□□□ -0.96
CLK3-221ENST00000568139 USH2AO75445 5202 aa9.02□□□□□ -0.97
CLK3-221ENST00000568139 TRAV13-2A0A0B4J235 113 aa9.01□□□□□ -0.97
CLK3-221ENST00000568139 C20orf202A1L168 122 aa9.01□□□□□ -0.97
CLK3-221ENST00000568139 IGFL1Q6UW32 110 aa9.01□□□□□ -0.97
CLK3-221ENST00000568139 CLEC2BQ92478 149 aa9.01□□□□□ -0.97
CLK3-221ENST00000568139 C3orf79P0CE67 100 aa9□□□□□ -0.97
CLK3-221ENST00000568139 HIST1H2BKO60814 126 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 243.5 ms