RNA–Protein interactions for RNA: ENST00000567379.5

VPS9D1-206, Transcript of VPS9 domain containing 1, humanhuman

TSL 5

Gene VPS9D1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-206ENST00000567379 C22orf24Q9Y442 160 aa6.96□□□□□ -1.3
VPS9D1-206ENST00000567379 COX7BP24311 80 aa6.95□□□□□ -1.3
VPS9D1-206ENST00000567379 LINC00575Q6W349 94 aa6.95□□□□□ -1.3
VPS9D1-206ENST00000567379 PPDPFLQ8WWR9 84 aa6.95□□□□□ -1.3
VPS9D1-206ENST00000567379 KCNQ1DNQ9H478 68 aa6.95□□□□□ -1.3
VPS9D1-206ENST00000567379 LINC00474Q9P2X8 69 aa6.95□□□□□ -1.3
VPS9D1-206ENST00000567379 J3QR89 54 aa6.94□□□□□ -1.3
VPS9D1-206ENST00000567379 PRYO14603 147 aa6.94□□□□□ -1.3
VPS9D1-206ENST00000567379 MRPL55Q7Z7F7 128 aaKnown RBP6.94□□□□□ -1.3
VPS9D1-206ENST00000567379 LINC00167Q96N53 147 aa6.94□□□□□ -1.3
VPS9D1-206ENST00000567379 ABCA13Q86UQ4 5058 aa6.94□□□□□ -1.3
VPS9D1-206ENST00000567379 IGLV1-50A0A075B6I6 118 aa6.93□□□□□ -1.3
VPS9D1-206ENST00000567379 hADV29S1A0JD25 119 aa6.93□□□□□ -1.3
VPS9D1-206ENST00000567379 ELOF1P60002 83 aaKnown RBP6.93□□□□□ -1.3
VPS9D1-206ENST00000567379 SDIM1Q6ZPB5 146 aa6.93□□□□□ -1.3
VPS9D1-206ENST00000567379 KRTAP7-1Q8IUC3 87 aa6.93□□□□□ -1.3
VPS9D1-206ENST00000567379 ORMDL1Q9P0S3 153 aa6.93□□□□□ -1.3
VPS9D1-206ENST00000567379 RPL37AP8A6NKH3 93 aa6.92□□□□□ -1.3
VPS9D1-206ENST00000567379 ALMS1Q8TCU4 4167 aa6.92□□□□□ -1.3
VPS9D1-206ENST00000567379 A0A1W2PNN7 141 aa6.91□□□□□ -1.3
VPS9D1-206ENST00000567379 RTL8CO15255 209 aa6.91□□□□□ -1.3
VPS9D1-206ENST00000567379 H3BQ85 93 aa6.9□□□□□ -1.3
VPS9D1-206ENST00000567379 CHTF8P0CG12 524 aa6.9□□□□□ -1.3
VPS9D1-206ENST00000567379 DPH3Q96FX2 82 aa6.9□□□□□ -1.3
VPS9D1-206ENST00000567379 DNAH6Q9C0G6 4158 aa6.89□□□□□ -1.31
VPS9D1-206ENST00000567379 IGLV5-52A0A0A0MRZ9 124 aa6.89□□□□□ -1.31
VPS9D1-206ENST00000567379 ETDCA0A1B0GVM5 59 aa6.89□□□□□ -1.31
VPS9D1-206ENST00000567379 GHRHP01286 108 aa6.89□□□□□ -1.31
VPS9D1-206ENST00000567379 INAFM2P0DMQ5 153 aa6.89□□□□□ -1.31
VPS9D1-206ENST00000567379 LINC00528Q8N1L1 170 aa6.89□□□□□ -1.31
VPS9D1-206ENST00000567379 HECTD4Q9Y4D8 3996 aa6.89□□□□□ -1.31
VPS9D1-206ENST00000567379 DNAH10Q8IVF4 4471 aa6.88□□□□□ -1.31
VPS9D1-206ENST00000567379 TEX49A0A1B0GTD5 131 aa6.88□□□□□ -1.31
VPS9D1-206ENST00000567379 TMEM256-PLSCR3K7ERE1 68 aa6.88□□□□□ -1.31
VPS9D1-206ENST00000567379 SPRR1AP35321 89 aa6.88□□□□□ -1.31
VPS9D1-206ENST00000567379 TNP2Q05952 138 aa6.88□□□□□ -1.31
VPS9D1-206ENST00000567379 REG3GQ6UW15 175 aa6.88□□□□□ -1.31
VPS9D1-206ENST00000567379 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.88□□□□□ -1.31
VPS9D1-206ENST00000567379 DHRS4-AS1Q9P1J3 65 aa6.87□□□□□ -1.31
VPS9D1-206ENST00000567379 B5MCH6 92 aa6.86□□□□□ -1.31
VPS9D1-206ENST00000567379 UBE2BP63146 152 aa6.86□□□□□ -1.31
VPS9D1-206ENST00000567379 Q6ZQY7 126 aa6.86□□□□□ -1.31
VPS9D1-206ENST00000567379 SPACA4Q8TDM5 124 aa6.86□□□□□ -1.31
VPS9D1-206ENST00000567379 KRTAP4-16G5E9R7 235 aaPredicted RBP6.85□□□□□ -1.31
VPS9D1-206ENST00000567379 Q6ZRX8 168 aa6.85□□□□□ -1.31
VPS9D1-206ENST00000567379 PHF5AQ7RTV0 110 aaKnown RBP6.85□□□□□ -1.31
VPS9D1-206ENST00000567379 FUSP35637 526 aaKnown RBP eCLIP6.84□□□□□ -1.31
VPS9D1-206ENST00000567379 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.84□□□□□ -1.31
VPS9D1-206ENST00000567379 JMJD7-PLA2G4BH0Y9G9 81 aa6.83□□□□□ -1.32
VPS9D1-206ENST00000567379 PANO1I0J062 215 aa6.83□□□□□ -1.32
VPS9D1-206ENST00000567379 VPS25Q9BRG1 176 aa6.83□□□□□ -1.32
VPS9D1-206ENST00000567379 EPM2AB3EWF7 344 aa6.82□□□□□ -1.32
VPS9D1-206ENST00000567379 FAM19A1Q7Z5A9 133 aa6.82□□□□□ -1.32
VPS9D1-206ENST00000567379 OBSCN-AS1Q96MR7 158 aa6.82□□□□□ -1.32
VPS9D1-206ENST00000567379 LAMTOR3Q9UHA4 124 aa6.81□□□□□ -1.32
VPS9D1-206ENST00000567379 Q9BRP9 147 aa6.8□□□□□ -1.32
VPS9D1-206ENST00000567379 PLAC8Q9NZF1 115 aa6.8□□□□□ -1.32
VPS9D1-206ENST00000567379 DNAH2Q9P225 4427 aa6.8□□□□□ -1.32
VPS9D1-206ENST00000567379 KRTAP10-2P60368 255 aa6.79□□□□□ -1.32
VPS9D1-206ENST00000567379 C14orf132Q9NPU4 83 aa6.79□□□□□ -1.32
VPS9D1-206ENST00000567379 KMT2AQ03164 3969 aa6.79□□□□□ -1.32
VPS9D1-206ENST00000567379 DNAH17Q9UFH2 4485 aa6.79□□□□□ -1.32
VPS9D1-206ENST00000567379 FAM240AA0A1B0GVK7 77 aa6.78□□□□□ -1.32
VPS9D1-206ENST00000567379 ACYP1P07311 99 aa6.78□□□□□ -1.32
VPS9D1-206ENST00000567379 RBM3P98179 157 aaKnown RBP6.78□□□□□ -1.32
VPS9D1-206ENST00000567379 HERC1Q15751 4861 aa6.77□□□□□ -1.33
VPS9D1-206ENST00000567379 A0A1B0GV72 72 aa6.77□□□□□ -1.33
VPS9D1-206ENST00000567379 H0Y9J4 135 aa6.77□□□□□ -1.33
VPS9D1-206ENST00000567379 BCE1O60756 84 aa6.77□□□□□ -1.33
VPS9D1-206ENST00000567379 UBE2AP49459 152 aa6.77□□□□□ -1.33
VPS9D1-206ENST00000567379 NDUFV3P56181 108 aaKnown RBP6.77□□□□□ -1.33
VPS9D1-206ENST00000567379 LINC00336Q6ZUF6 198 aa6.77□□□□□ -1.33
VPS9D1-206ENST00000567379 KRTAP11-1Q8IUC1 163 aa6.77□□□□□ -1.33
VPS9D1-206ENST00000567379 DEFB105AQ8NG35 78 aa6.77□□□□□ -1.33
VPS9D1-206ENST00000567379 PRLHP81277 87 aa6.76□□□□□ -1.33
VPS9D1-206ENST00000567379 GAGE2AQ6NT46 116 aa6.76□□□□□ -1.33
VPS9D1-206ENST00000567379 SMCR5Q8TEV8 140 aa6.76□□□□□ -1.33
VPS9D1-206ENST00000567379 ERC2-IT1O76042 136 aa6.75□□□□□ -1.33
VPS9D1-206ENST00000567379 PDE6GP18545 87 aa6.75□□□□□ -1.33
VPS9D1-206ENST00000567379 DSCR8Q96T75 97 aa6.75□□□□□ -1.33
VPS9D1-206ENST00000567379 HIGD2AQ9BW72 106 aa6.75□□□□□ -1.33
VPS9D1-206ENST00000567379 UBR4Q5T4S7 5183 aa6.75□□□□□ -1.33
VPS9D1-206ENST00000567379 IGLV5-48A0A075B6I7 105 aa6.74□□□□□ -1.33
VPS9D1-206ENST00000567379 CCKP06307 115 aa6.74□□□□□ -1.33
VPS9D1-206ENST00000567379 LINC01547P58512 204 aaPredicted RBP6.74□□□□□ -1.33
VPS9D1-206ENST00000567379 Q8N377 158 aa6.74□□□□□ -1.33
VPS9D1-206ENST00000567379 ST20-AS1Q8NBB2 130 aa6.74□□□□□ -1.33
VPS9D1-206ENST00000567379 CDIP1Q9H305 208 aa6.74□□□□□ -1.33
VPS9D1-206ENST00000567379 LOC110117498A0A087WWA1 95 aa6.73□□□□□ -1.33
VPS9D1-206ENST00000567379 C21orf62-AS1Q17RA5 79 aa6.73□□□□□ -1.33
VPS9D1-206ENST00000567379 KRTAP10-1P60331 282 aa6.71□□□□□ -1.34
VPS9D1-206ENST00000567379 Q6ZQT0 140 aa6.71□□□□□ -1.34
VPS9D1-206ENST00000567379 SIGMAR1Q99720 223 aa6.71□□□□□ -1.34
VPS9D1-206ENST00000567379 PSORS1C2Q9UIG4 136 aa6.71□□□□□ -1.34
VPS9D1-206ENST00000567379 Q6ZSA8 131 aa6.7□□□□□ -1.34
VPS9D1-206ENST00000567379 KRTAP13-1Q8IUC0 172 aa6.7□□□□□ -1.34
VPS9D1-206ENST00000567379 FAM30AQ9NZY2 134 aa6.7□□□□□ -1.34
VPS9D1-206ENST00000567379 TRBV7-4A0A0J9YYF1 115 aa6.69□□□□□ -1.34
VPS9D1-206ENST00000567379 F8WEM9 126 aa6.69□□□□□ -1.34
VPS9D1-206ENST00000567379 C1orf137Q5JT78 98 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms