RNA–Protein interactions for RNA: ENST00000566371.5

SPG7-214, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-214ENST00000566371 PRR4Q16378 134 aa12.58□□□□□ -0.4
SPG7-214ENST00000566371 Q6ZRX8 168 aa12.58□□□□□ -0.4
SPG7-214ENST00000566371 CBY1Q9Y3M2 126 aa12.58□□□□□ -0.4
SPG7-214ENST00000566371 LPAP08519 4548 aa12.56□□□□□ -0.4
SPG7-214ENST00000566371 C3orf22Q8N5N4 141 aa12.56□□□□□ -0.4
SPG7-214ENST00000566371 ZNF73O43830 326 aaPredicted RBP12.55□□□□□ -0.4
SPG7-214ENST00000566371 LINC00483Q53H64 154 aa12.55□□□□□ -0.4
SPG7-214ENST00000566371 ANKRD39Q53RE8 183 aa12.55□□□□□ -0.4
SPG7-214ENST00000566371 SCGB1D4Q6XE38 83 aa12.54□□□□□ -0.4
SPG7-214ENST00000566371 ATOH7Q8N100 152 aa12.54□□□□□ -0.4
SPG7-214ENST00000566371 HIST3H2BBQ8N257 126 aa12.54□□□□□ -0.4
SPG7-214ENST00000566371 Q9BRP9 147 aa12.54□□□□□ -0.4
SPG7-214ENST00000566371 JOSD1Q15040 202 aaPredicted RBP12.53□□□□□ -0.4
SPG7-214ENST00000566371 HIST1H2BLQ99880 126 aa12.52□□□□□ -0.41
SPG7-214ENST00000566371 SPANXDQ9BXN6 97 aa12.52□□□□□ -0.41
SPG7-214ENST00000566371 ERC2-IT1O76042 136 aa12.51□□□□□ -0.41
SPG7-214ENST00000566371 S100A2P29034 98 aa12.51□□□□□ -0.41
SPG7-214ENST00000566371 SNRPEP62304 92 aaKnown RBP12.51□□□□□ -0.41
SPG7-214ENST00000566371 LINC00518Q8N0U6 118 aa12.5□□□□□ -0.41
SPG7-214ENST00000566371 COPS9Q8WXC6 57 aa12.5□□□□□ -0.41
SPG7-214ENST00000566371 PPDPFQ9H3Y8 114 aa12.5□□□□□ -0.41
SPG7-214ENST00000566371 RNF213Q63HN8 5207 aa12.49□□□□□ -0.41
SPG7-214ENST00000566371 SPAG11AQ6PDA7 123 aa12.49□□□□□ -0.41
SPG7-214ENST00000566371 OR13C6PQ8NH95 151 aa12.49□□□□□ -0.41
SPG7-214ENST00000566371 HINT1P49773 126 aaPredicted RBP12.48□□□□□ -0.41
SPG7-214ENST00000566371 GAGE2AQ6NT46 116 aa12.48□□□□□ -0.41
SPG7-214ENST00000566371 S100A6P06703 90 aa12.47□□□□□ -0.41
SPG7-214ENST00000566371 Q6ZVH6 145 aa12.47□□□□□ -0.41
SPG7-214ENST00000566371 PCP2Q8IVA1 136 aa12.47□□□□□ -0.41
SPG7-214ENST00000566371 IFITM1P13164 125 aa12.46□□□□□ -0.41
SPG7-214ENST00000566371 C5orf52A6NGY3 159 aa12.44□□□□□ -0.42
SPG7-214ENST00000566371 Q8NBF4 154 aa12.44□□□□□ -0.42
SPG7-214ENST00000566371 C4orf48Q5BLP8 95 aa12.43□□□□□ -0.42
SPG7-214ENST00000566371 RETNLBQ9BQ08 111 aa12.42□□□□□ -0.42
SPG7-214ENST00000566371 HSBP1L1C9JCN9 74 aa12.4□□□□□ -0.42
SPG7-214ENST00000566371 DHRS4-AS1Q9P1J3 65 aa12.4□□□□□ -0.42
SPG7-214ENST00000566371 IGLV9-49A0A0B4J1Y8 123 aa12.38□□□□□ -0.43
SPG7-214ENST00000566371 ELOF1P60002 83 aaKnown RBP12.38□□□□□ -0.43
SPG7-214ENST00000566371 MOBPQ13875 183 aa12.38□□□□□ -0.43
SPG7-214ENST00000566371 SSBP3-AS1Q7Z2R9 100 aa12.38□□□□□ -0.43
SPG7-214ENST00000566371 MUSTN1Q8IVN3 82 aa12.38□□□□□ -0.43
SPG7-214ENST00000566371 SPINK1P00995 79 aa12.37□□□□□ -0.43
SPG7-214ENST00000566371 TRBV7-6A0A0J9YX20 115 aa12.36□□□□□ -0.43
SPG7-214ENST00000566371 COX7BP24311 80 aa12.36□□□□□ -0.43
SPG7-214ENST00000566371 C6orf99Q4VX62 202 aa12.36□□□□□ -0.43
SPG7-214ENST00000566371 ST20-AS1Q8NBB2 130 aa12.36□□□□□ -0.43
SPG7-214ENST00000566371 IGLV7-46A0A075B6I9 117 aa12.33□□□□□ -0.44
SPG7-214ENST00000566371 A6NDN8 102 aa12.33□□□□□ -0.44
SPG7-214ENST00000566371 TPRXLQ17RH7 258 aa12.33□□□□□ -0.44
SPG7-214ENST00000566371 SPRR1BP22528 89 aa12.32□□□□□ -0.44
SPG7-214ENST00000566371 RPS29P62273 56 aaKnown RBP12.32□□□□□ -0.44
SPG7-214ENST00000566371 FP248Q71RG6 208 aaPredicted RBP12.31□□□□□ -0.44
SPG7-214ENST00000566371 TMA7Q9Y2S6 64 aaKnown RBP12.31□□□□□ -0.44
SPG7-214ENST00000566371 TRAV13-2A0A0B4J235 113 aa12.3□□□□□ -0.44
SPG7-214ENST00000566371 SCGB1D1O95968 90 aa12.3□□□□□ -0.44
SPG7-214ENST00000566371 SLC25A34Q6PIV7 304 aa12.3□□□□□ -0.44
SPG7-214ENST00000566371 A0A1B0GWB2 263 aa12.29□□□□□ -0.44
SPG7-214ENST00000566371 C9orf153Q5TBE3 101 aa12.29□□□□□ -0.44
SPG7-214ENST00000566371 A4D1N5 150 aa12.25□□□□□ -0.45
SPG7-214ENST00000566371 CDIP1Q9H305 208 aa12.24□□□□□ -0.45
SPG7-214ENST00000566371 LAMTOR3Q9UHA4 124 aa12.24□□□□□ -0.45
SPG7-214ENST00000566371 Q8N377 158 aa12.23□□□□□ -0.45
SPG7-214ENST00000566371 SMIM11BQ8TCY0 68 aa12.23□□□□□ -0.45
SPG7-214ENST00000566371 TEX49A0A1B0GTD5 131 aa12.21□□□□□ -0.45
SPG7-214ENST00000566371 COX8AP10176 69 aa12.21□□□□□ -0.45
SPG7-214ENST00000566371 TAL2Q16559 108 aa12.21□□□□□ -0.45
SPG7-214ENST00000566371 SLC25A20O43772 301 aa12.2□□□□□ -0.46
SPG7-214ENST00000566371 DLEU1O43261 78 aa12.19□□□□□ -0.46
SPG7-214ENST00000566371 DEFB105AQ8NG35 78 aa12.19□□□□□ -0.46
SPG7-214ENST00000566371 NHP2Q9NX24 153 aaKnown RBP12.19□□□□□ -0.46
SPG7-214ENST00000566371 MUC2Q02817 5179 aa12.19□□□□□ -0.46
SPG7-214ENST00000566371 IGLV5-48A0A075B6I7 105 aa12.18□□□□□ -0.46
SPG7-214ENST00000566371 HIST1H4GQ99525 98 aa12.16□□□□□ -0.46
SPG7-214ENST00000566371 VAMP3Q15836 100 aa12.15□□□□□ -0.46
SPG7-214ENST00000566371 Q1RN00 199 aa12.15□□□□□ -0.46
SPG7-214ENST00000566371 KRTAP13-3Q3SY46 172 aa12.15□□□□□ -0.46
SPG7-214ENST00000566371 LINC01547P58512 204 aaPredicted RBP12.14□□□□□ -0.47
SPG7-214ENST00000566371 SMIM29Q86T20 159 aa12.13□□□□□ -0.47
SPG7-214ENST00000566371 LIMD2Q9BT23 127 aa12.11□□□□□ -0.47
SPG7-214ENST00000566371 PRO1933Q9H354 126 aa12.11□□□□□ -0.47
SPG7-214ENST00000566371 PAM16Q9Y3D7 125 aa12.11□□□□□ -0.47
SPG7-214ENST00000566371 LOC105371267A0A1B0GV96 52 aa12.1□□□□□ -0.47
SPG7-214ENST00000566371 CD164Q04900 197 aa12.1□□□□□ -0.47
SPG7-214ENST00000566371 SPATA45Q537H7 98 aa12.1□□□□□ -0.47
SPG7-214ENST00000566371 C14orf144Q96I85 54 aa12.1□□□□□ -0.47
SPG7-214ENST00000566371 VAMP8Q9BV40 100 aa12.1□□□□□ -0.47
SPG7-214ENST00000566371 HIGD1BQ9P298 99 aa12.1□□□□□ -0.47
SPG7-214ENST00000566371 LINC00575Q6W349 94 aa12.09□□□□□ -0.47
SPG7-214ENST00000566371 C12orf57Q99622 126 aa12.08□□□□□ -0.48
SPG7-214ENST00000566371 HRCT1Q6UXD1 115 aa12.07□□□□□ -0.48
SPG7-214ENST00000566371 MUC17Q685J3 4493 aa12.05□□□□□ -0.48
SPG7-214ENST00000566371 A0A0U1RQV1 116 aa12.04□□□□□ -0.48
SPG7-214ENST00000566371 hADV29S1A0JD25 119 aa12.04□□□□□ -0.48
SPG7-214ENST00000566371 BVES-AS1Q5T3Y7 98 aa12.04□□□□□ -0.48
SPG7-214ENST00000566371 H7C2G1 150 aa12.03□□□□□ -0.48
SPG7-214ENST00000566371 C2orf91Q6ZV80 131 aa12.02□□□□□ -0.49
SPG7-214ENST00000566371 CFC1BP0CG36 223 aa12.01□□□□□ -0.49
SPG7-214ENST00000566371 CFC1P0CG37 223 aa12.01□□□□□ -0.49
SPG7-214ENST00000566371 Q6ZQY7 126 aa12.01□□□□□ -0.49
SPG7-214ENST00000566371 Q5XG85 94 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms