RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 VPREB1P12018 145 aa5.21□□□□□ -1.58
VPS9D1-205ENST00000565452 S100A12P80511 92 aa5.21□□□□□ -1.58
VPS9D1-205ENST00000565452 PYY3Q5JQD4 70 aa5.21□□□□□ -1.58
VPS9D1-205ENST00000565452 ADAMTSL4-AS1Q5T5F5 129 aa5.21□□□□□ -1.58
VPS9D1-205ENST00000565452 KRTAP7-1Q8IUC3 87 aa5.21□□□□□ -1.58
VPS9D1-205ENST00000565452 BOD1L2Q8IYS8 172 aa5.21□□□□□ -1.58
VPS9D1-205ENST00000565452 LITAFQ99732 161 aa5.21□□□□□ -1.58
VPS9D1-205ENST00000565452 KRTAP4-1Q9BYQ7 146 aa5.21□□□□□ -1.58
VPS9D1-205ENST00000565452 CBY1Q9Y3M2 126 aa5.21□□□□□ -1.58
VPS9D1-205ENST00000565452 SPATA45Q537H7 98 aa5.2□□□□□ -1.58
VPS9D1-205ENST00000565452 LINC00518Q8N0U6 118 aa5.2□□□□□ -1.58
VPS9D1-205ENST00000565452 LINC00167Q96N53 147 aa5.2□□□□□ -1.58
VPS9D1-205ENST00000565452 TTTY13Q9BZ97 58 aa5.2□□□□□ -1.58
VPS9D1-205ENST00000565452 SPANXB1Q9NS25 103 aaPredicted RBP5.2□□□□□ -1.58
VPS9D1-205ENST00000565452 SLC25A34Q6PIV7 304 aa5.19□□□□□ -1.58
VPS9D1-205ENST00000565452 LINC00308Q8TCZ7 52 aa5.19□□□□□ -1.58
VPS9D1-205ENST00000565452 PAM16Q9Y3D7 125 aa5.19□□□□□ -1.58
VPS9D1-205ENST00000565452 RPL28P46779 137 aaKnown RBP5.18□□□□□ -1.58
VPS9D1-205ENST00000565452 LCE2CQ5TA81 110 aa5.18□□□□□ -1.58
VPS9D1-205ENST00000565452 DAND5Q8N907 189 aa5.18□□□□□ -1.58
VPS9D1-205ENST00000565452 HIGD1BQ9P298 99 aa5.18□□□□□ -1.58
VPS9D1-205ENST00000565452 MT1HP80294 61 aa5.17□□□□□ -1.58
VPS9D1-205ENST00000565452 LORP23490 312 aaPredicted RBP5.16□□□□□ -1.58
VPS9D1-205ENST00000565452 KRTAP13-2Q52LG2 175 aa5.16□□□□□ -1.58
VPS9D1-205ENST00000565452 SOSTDC1Q6X4U4 206 aa5.16□□□□□ -1.58
VPS9D1-205ENST00000565452 FP248Q71RG6 208 aaPredicted RBP5.16□□□□□ -1.58
VPS9D1-205ENST00000565452 MUSTN1Q8IVN3 82 aa5.16□□□□□ -1.58
VPS9D1-205ENST00000565452 C14orf144Q96I85 54 aa5.16□□□□□ -1.58
VPS9D1-205ENST00000565452 TMEM126AQ9H061 195 aa5.16□□□□□ -1.58
VPS9D1-205ENST00000565452 ANAPC11Q9NYG5 84 aa5.16□□□□□ -1.58
VPS9D1-205ENST00000565452 RPL37AP8A6NKH3 93 aa5.15□□□□□ -1.59
VPS9D1-205ENST00000565452 PRYO14603 147 aa5.15□□□□□ -1.59
VPS9D1-205ENST00000565452 BCE1O60756 84 aa5.15□□□□□ -1.59
VPS9D1-205ENST00000565452 SMIM6P0DI80 62 aa5.15□□□□□ -1.59
VPS9D1-205ENST00000565452 KRTAP10-6P60371 365 aaPredicted RBP5.15□□□□□ -1.59
VPS9D1-205ENST00000565452 TAL2Q16559 108 aa5.15□□□□□ -1.59
VPS9D1-205ENST00000565452 FAM229BQ4G0N7 80 aa5.15□□□□□ -1.59
VPS9D1-205ENST00000565452 S100A7L2Q5SY68 101 aa5.15□□□□□ -1.59
VPS9D1-205ENST00000565452 HIST1H4GQ99525 98 aa5.15□□□□□ -1.59
VPS9D1-205ENST00000565452 KCNQ1DNQ9H478 68 aa5.15□□□□□ -1.59
VPS9D1-205ENST00000565452 GAGE10A6NGK3 116 aa5.14□□□□□ -1.59
VPS9D1-205ENST00000565452 IGLV6-57P01721 117 aa5.14□□□□□ -1.59
VPS9D1-205ENST00000565452 DDTP30046 118 aa5.14□□□□□ -1.59
VPS9D1-205ENST00000565452 NPC2P61916 151 aa5.14□□□□□ -1.59
VPS9D1-205ENST00000565452 KRTAP13-3Q3SY46 172 aa5.14□□□□□ -1.59
VPS9D1-205ENST00000565452 Q8NDZ9 215 aa5.14□□□□□ -1.59
VPS9D1-205ENST00000565452 IGKV2-28A0A075B6P5 120 aa5.13□□□□□ -1.59
VPS9D1-205ENST00000565452 TRAV13-2A0A0B4J235 113 aa5.13□□□□□ -1.59
VPS9D1-205ENST00000565452 LOC105371267A0A1B0GV96 52 aa5.13□□□□□ -1.59
VPS9D1-205ENST00000565452 NCR3O14931 201 aa5.13□□□□□ -1.59
VPS9D1-205ENST00000565452 EIF4EBP3O60516 100 aaPredicted RBP5.13□□□□□ -1.59
VPS9D1-205ENST00000565452 IGKV2D-28P01615 120 aa5.13□□□□□ -1.59
VPS9D1-205ENST00000565452 UQCR10Q9UDW1 63 aa5.13□□□□□ -1.59
VPS9D1-205ENST00000565452 TRBV10-3A0A0K0K1G6 114 aa5.12□□□□□ -1.59
VPS9D1-205ENST00000565452 M0R2T5 61 aa5.12□□□□□ -1.59
VPS9D1-205ENST00000565452 SPRR1AP35321 89 aa5.12□□□□□ -1.59
VPS9D1-205ENST00000565452 HINT1P49773 126 aaPredicted RBP5.12□□□□□ -1.59
VPS9D1-205ENST00000565452 SPAG11AQ6PDA7 123 aa5.12□□□□□ -1.59
VPS9D1-205ENST00000565452 OR13C6PQ8NH95 151 aa5.12□□□□□ -1.59
VPS9D1-205ENST00000565452 TRBV7-6A0A0J9YX20 115 aa5.1□□□□□ -1.59
VPS9D1-205ENST00000565452 TMEM238LA0A1B0GVL6 79 aa5.1□□□□□ -1.59
VPS9D1-205ENST00000565452 ETDCA0A1B0GVM5 59 aa5.1□□□□□ -1.59
VPS9D1-205ENST00000565452 A4D1N5 150 aa5.1□□□□□ -1.59
VPS9D1-205ENST00000565452 A6NJY4 79 aa5.1□□□□□ -1.59
VPS9D1-205ENST00000565452 UBE2AP49459 152 aa5.1□□□□□ -1.59
VPS9D1-205ENST00000565452 C2orf91Q6ZV80 131 aa5.1□□□□□ -1.59
VPS9D1-205ENST00000565452 FAM19A1Q7Z5A9 133 aa5.1□□□□□ -1.59
VPS9D1-205ENST00000565452 CEND1Q8N111 149 aa5.1□□□□□ -1.59
VPS9D1-205ENST00000565452 TRAV23DV6A0A075B6W5 121 aa5.09□□□□□ -1.59
VPS9D1-205ENST00000565452 A6NDN8 102 aa5.09□□□□□ -1.59
VPS9D1-205ENST00000565452 KRTAP4-16G5E9R7 235 aaPredicted RBP5.09□□□□□ -1.59
VPS9D1-205ENST00000565452 KRTAP19-2Q3LHN2 52 aa5.09□□□□□ -1.59
VPS9D1-205ENST00000565452 C4orf48Q5BLP8 95 aa5.09□□□□□ -1.59
VPS9D1-205ENST00000565452 KRTAP13-1Q8IUC0 172 aa5.09□□□□□ -1.59
VPS9D1-205ENST00000565452 ZNF73O43830 326 aaPredicted RBP5.08□□□□□ -1.6
VPS9D1-205ENST00000565452 HSD52Q0P140 79 aa5.08□□□□□ -1.6
VPS9D1-205ENST00000565452 B5MCH6 92 aa5.07□□□□□ -1.6
VPS9D1-205ENST00000565452 TSTD3H0UI37 97 aa5.07□□□□□ -1.6
VPS9D1-205ENST00000565452 VAMP3Q15836 100 aa5.07□□□□□ -1.6
VPS9D1-205ENST00000565452 C12orf57Q99622 126 aa5.07□□□□□ -1.6
VPS9D1-205ENST00000565452 A0A0B4J2C4 111 aa5.06□□□□□ -1.6
VPS9D1-205ENST00000565452 CFC1P0CG37 223 aa5.06□□□□□ -1.6
VPS9D1-205ENST00000565452 Q6ZRX8 168 aa5.06□□□□□ -1.6
VPS9D1-205ENST00000565452 RAB37Q96AX2 223 aa5.06□□□□□ -1.6
VPS9D1-205ENST00000565452 SSPOA2VEC9 5147 aa5.06□□□□□ -1.6
VPS9D1-205ENST00000565452 FCGBPQ9Y6R7 5405 aaPredicted RBP5.05□□□□□ -1.6
VPS9D1-205ENST00000565452 A0A1B0GWB2 263 aa5.05□□□□□ -1.6
VPS9D1-205ENST00000565452 DHRS4-AS1Q9P1J3 65 aa5.05□□□□□ -1.6
VPS9D1-205ENST00000565452 ZNF706Q9Y5V0 76 aaPredicted RBP5.05□□□□□ -1.6
VPS9D1-205ENST00000565452 USH2AO75445 5202 aa5.04□□□□□ -1.6
VPS9D1-205ENST00000565452 COX7BP24311 80 aa5.04□□□□□ -1.6
VPS9D1-205ENST00000565452 ELOF1P60002 83 aaKnown RBP5.04□□□□□ -1.6
VPS9D1-205ENST00000565452 PRLHP81277 87 aa5.04□□□□□ -1.6
VPS9D1-205ENST00000565452 C6orf99Q4VX62 202 aa5.04□□□□□ -1.6
VPS9D1-205ENST00000565452 SMIM11BQ8TCY0 68 aa5.04□□□□□ -1.6
VPS9D1-205ENST00000565452 SMCR5Q8TEV8 140 aa5.04□□□□□ -1.6
VPS9D1-205ENST00000565452 HIGD2AQ9BW72 106 aa5.04□□□□□ -1.6
VPS9D1-205ENST00000565452 PRO1933Q9H354 126 aa5.04□□□□□ -1.6
VPS9D1-205ENST00000565452 NHP2Q9NX24 153 aaKnown RBP5.04□□□□□ -1.6
VPS9D1-205ENST00000565452 PRO1854Q9UHT4 67 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 840.6 ms