RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 JMJD1CQ15652 2540 aa3.46□□□□□ -1.86
SMG1-211ENST00000565324 A0A1B0GVX0 72 aa3.46□□□□□ -1.86
SMG1-211ENST00000565324 KCNQ1DNQ9H478 68 aa3.46□□□□□ -1.86
SMG1-211ENST00000565324 RANBP2P49792 3224 aaKnown RBP3.46□□□□□ -1.86
SMG1-211ENST00000565324 LAMA2P24043 3122 aaKnown RBP3.46□□□□□ -1.86
SMG1-211ENST00000565324 SPTBN4Q9H254 2564 aa3.46□□□□□ -1.86
SMG1-211ENST00000565324 C9orf129Q5T035 196 aaKnown RBP3.46□□□□□ -1.86
SMG1-211ENST00000565324 IGF2RP11717 2491 aa3.45□□□□□ -1.86
SMG1-211ENST00000565324 C8orf17Q9NRJ1 99 aa3.45□□□□□ -1.86
SMG1-211ENST00000565324 AVPP01185 164 aa3.45□□□□□ -1.86
SMG1-211ENST00000565324 LITAFQ99732 161 aa3.44□□□□□ -1.86
SMG1-211ENST00000565324 CHD8Q9HCK8 2581 aa3.44□□□□□ -1.86
SMG1-211ENST00000565324 LINC00483Q53H64 154 aa3.44□□□□□ -1.86
SMG1-211ENST00000565324 FAM104AQ969W3 186 aa3.44□□□□□ -1.86
SMG1-211ENST00000565324 A0A0A0MQY5 61 aa3.43□□□□□ -1.86
SMG1-211ENST00000565324 DNAH10OSP0CZ25 163 aa3.43□□□□□ -1.86
SMG1-211ENST00000565324 RTL8CO15255 209 aa3.42□□□□□ -1.86
SMG1-211ENST00000565324 PHF5AQ7RTV0 110 aaKnown RBP3.42□□□□□ -1.86
SMG1-211ENST00000565324 LINC00528Q8N1L1 170 aa3.42□□□□□ -1.86
SMG1-211ENST00000565324 COL6A3P12111 3177 aa3.42□□□□□ -1.86
SMG1-211ENST00000565324 MTORP42345 2549 aa3.42□□□□□ -1.86
SMG1-211ENST00000565324 COL4A2P08572 1712 aa3.41□□□□□ -1.86
SMG1-211ENST00000565324 IGFL1Q6UW32 110 aa3.41□□□□□ -1.86
SMG1-211ENST00000565324 PLA2G2DQ9UNK4 145 aa3.41□□□□□ -1.86
SMG1-211ENST00000565324 USP9YO00507 2555 aaPredicted RBP3.41□□□□□ -1.86
SMG1-211ENST00000565324 CSNK1G2-AS1Q8NCQ2 148 aa3.4□□□□□ -1.86
SMG1-211ENST00000565324 C5orf42Q9H799 3197 aa3.4□□□□□ -1.86
SMG1-211ENST00000565324 DMAC1Q96GE9 116 aa3.4□□□□□ -1.86
SMG1-211ENST00000565324 CHTF8P0CG12 524 aa3.4□□□□□ -1.86
SMG1-211ENST00000565324 SPTBN5Q9NRC6 3674 aaKnown RBP3.4□□□□□ -1.87
SMG1-211ENST00000565324 IGLV1-50A0A075B6I6 118 aa3.4□□□□□ -1.87
SMG1-211ENST00000565324 NBDYA0A0U1RRE5 68 aa3.4□□□□□ -1.87
SMG1-211ENST00000565324 Q75L30 129 aa3.4□□□□□ -1.87
SMG1-211ENST00000565324 RBM12B-AS1Q9P1G2 102 aa3.4□□□□□ -1.87
SMG1-211ENST00000565324 ZNF861PO60384 105 aa3.39□□□□□ -1.87
SMG1-211ENST00000565324 LINC00304Q8N9R0 145 aa3.39□□□□□ -1.87
SMG1-211ENST00000565324 OBSCN-AS1Q96MR7 158 aa3.39□□□□□ -1.87
SMG1-211ENST00000565324 Q8N377 158 aa3.39□□□□□ -1.87
SMG1-211ENST00000565324 TLX1NBP0CAT3 122 aa3.39□□□□□ -1.87
SMG1-211ENST00000565324 COX6B2Q6YFQ2 88 aa3.39□□□□□ -1.87
SMG1-211ENST00000565324 H3BS24 57 aa3.38□□□□□ -1.87
SMG1-211ENST00000565324 Q8NAQ8 132 aa3.38□□□□□ -1.87
SMG1-211ENST00000565324 PRUNE2Q8WUY3 3088 aa3.38□□□□□ -1.87
SMG1-211ENST00000565324 MYO15AQ9UKN7 3530 aa3.38□□□□□ -1.87
SMG1-211ENST00000565324 C15orf56Q8N910 161 aa3.38□□□□□ -1.87
SMG1-211ENST00000565324 MUC3AQ02505 3323 aa3.38□□□□□ -1.87
SMG1-211ENST00000565324 DSCR10P59022 87 aa3.37□□□□□ -1.87
SMG1-211ENST00000565324 DNAH14Q0VDD8 3507 aa3.37□□□□□ -1.87
SMG1-211ENST00000565324 CDSNQ15517 529 aa3.37□□□□□ -1.87
SMG1-211ENST00000565324 IGLV5-37A0A075B6J1 123 aa3.37□□□□□ -1.87
SMG1-211ENST00000565324 OCR1Q9BZK8 76 aa3.36□□□□□ -1.87
SMG1-211ENST00000565324 A0A0D9SG42 100 aa3.36□□□□□ -1.87
SMG1-211ENST00000565324 LINC00588Q9Y4M8 146 aa3.36□□□□□ -1.87
SMG1-211ENST00000565324 KLK9Q2XQG4 91 aa3.36□□□□□ -1.87
SMG1-211ENST00000565324 IGLV7-46A0A075B6I9 117 aa3.35□□□□□ -1.87
SMG1-211ENST00000565324 PRR34Q9NV39 138 aa3.35□□□□□ -1.87
SMG1-211ENST00000565324 IGLV5-48A0A075B6I7 105 aa3.35□□□□□ -1.87
SMG1-211ENST00000565324 FAM168BA1KXE4 195 aa3.35□□□□□ -1.87
SMG1-211ENST00000565324 CENPEQ02224 2701 aa3.35□□□□□ -1.87
SMG1-211ENST00000565324 A0A1B0GU33 70 aa3.35□□□□□ -1.87
SMG1-211ENST00000565324 C10orf142B7Z368 130 aa3.35□□□□□ -1.87
SMG1-211ENST00000565324 SMR3AQ99954 134 aa3.35□□□□□ -1.87
SMG1-211ENST00000565324 USP24Q9UPU5 2620 aa3.34□□□□□ -1.88
SMG1-211ENST00000565324 J3QL48 77 aa3.33□□□□□ -1.88
SMG1-211ENST00000565324 SPRR4Q96PI1 79 aa3.32□□□□□ -1.88
SMG1-211ENST00000565324 C9orf163Q8N9P6 203 aa3.31□□□□□ -1.88
SMG1-211ENST00000565324 ASB16-AS1Q495Z4 193 aa3.31□□□□□ -1.88
SMG1-211ENST00000565324 CAMK2N1Q7Z7J9 78 aa3.31□□□□□ -1.88
SMG1-211ENST00000565324 Q8N1X5 172 aa3.31□□□□□ -1.88
SMG1-211ENST00000565324 A0A1W2PPR1 153 aa3.31□□□□□ -1.88
SMG1-211ENST00000565324 TNP2Q05952 138 aa3.31□□□□□ -1.88
SMG1-211ENST00000565324 TNRC18O15417 2968 aaPredicted RBP3.31□□□□□ -1.88
SMG1-211ENST00000565324 BPTFQ12830 3046 aa3.3□□□□□ -1.88
SMG1-211ENST00000565324 C9orf92A6NGG3 77 aa3.3□□□□□ -1.88
SMG1-211ENST00000565324 AKAP13Q12802 2813 aa3.3□□□□□ -1.88
SMG1-211ENST00000565324 FASNP49327 2511 aaKnown RBP3.3□□□□□ -1.88
SMG1-211ENST00000565324 LINC01558Q9Y6Z2 57 aa3.3□□□□□ -1.88
SMG1-211ENST00000565324 IGLV7-43P04211 117 aa3.3□□□□□ -1.88
SMG1-211ENST00000565324 MAP1AP78559 2803 aaPredicted RBP3.3□□□□□ -1.88
SMG1-211ENST00000565324 HRES1P13985 223 aa3.3□□□□□ -1.88
SMG1-211ENST00000565324 WDFY4Q6ZS81 3184 aa3.3□□□□□ -1.88
SMG1-211ENST00000565324 A0A1W2PNM2 257 aa3.3□□□□□ -1.88
SMG1-211ENST00000565324 KRTAP10-9P60411 292 aa3.3□□□□□ -1.88
SMG1-211ENST00000565324 GCN1Q92616 2671 aaKnown RBP3.29□□□□□ -1.88
SMG1-211ENST00000565324 TRANK1O15050 2925 aa3.29□□□□□ -1.88
SMG1-211ENST00000565324 WWC2-AS2Q96NR7 200 aa3.29□□□□□ -1.88
SMG1-211ENST00000565324 UTP20O75691 2785 aaKnown RBP3.29□□□□□ -1.88
SMG1-211ENST00000565324 CNBPP62633 177 aaKnown RBP3.28□□□□□ -1.88
SMG1-211ENST00000565324 PRR26Q8N8Z3 221 aa3.28□□□□□ -1.88
SMG1-211ENST00000565324 LINC00612Q8N6U2 182 aa3.28□□□□□ -1.88
SMG1-211ENST00000565324 EIF4EBP3O60516 100 aaPredicted RBP3.28□□□□□ -1.88
SMG1-211ENST00000565324 ZNF575Q86XF7 245 aa3.28□□□□□ -1.88
SMG1-211ENST00000565324 Q8N9P0 234 aaPredicted RBP3.28□□□□□ -1.88
SMG1-211ENST00000565324 EPG5Q9HCE0 2579 aa3.27□□□□□ -1.89
SMG1-211ENST00000565324 WDFY3Q8IZQ1 3526 aa3.27□□□□□ -1.89
SMG1-211ENST00000565324 Q5XG85 94 aa3.26□□□□□ -1.89
SMG1-211ENST00000565324 CSAG1Q6PB30 78 aa3.26□□□□□ -1.89
SMG1-211ENST00000565324 A0A0C4DFX4 3053 aa3.26□□□□□ -1.89
SMG1-211ENST00000565324 A0A087WTM6 91 aa3.26□□□□□ -1.89
SMG1-211ENST00000565324 Q5VV11 94 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms