RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 TRBV7-6A0A0J9YX20 115 aa4.78□□□□□ -1.64
HERPUD1-209ENST00000564678 A0A1B0GV72 72 aa4.78□□□□□ -1.64
HERPUD1-209ENST00000564678 Q6ZRP5 223 aa4.78□□□□□ -1.64
HERPUD1-209ENST00000564678 RMI2Q96E14 147 aa4.78□□□□□ -1.64
HERPUD1-209ENST00000564678 UPK3BQ9BT76 320 aa4.78□□□□□ -1.64
HERPUD1-209ENST00000564678 IMUPQ9GZP8 106 aa4.78□□□□□ -1.64
HERPUD1-209ENST00000564678 LINC00588Q9Y4M8 146 aa4.78□□□□□ -1.64
HERPUD1-209ENST00000564678 hADV29S1A0JD25 119 aa4.77□□□□□ -1.65
HERPUD1-209ENST00000564678 M0R378 163 aa4.77□□□□□ -1.65
HERPUD1-209ENST00000564678 SYCNQ0VAF6 134 aa4.77□□□□□ -1.65
HERPUD1-209ENST00000564678 FAM19A5Q7Z5A7 132 aaPredicted RBP4.77□□□□□ -1.65
HERPUD1-209ENST00000564678 LINC00643Q86TS7 51 aa4.77□□□□□ -1.65
HERPUD1-209ENST00000564678 MPLKIPQ8TAP9 179 aa4.77□□□□□ -1.65
HERPUD1-209ENST00000564678 KRTAP4-5Q9BYR2 181 aa4.77□□□□□ -1.65
HERPUD1-209ENST00000564678 COL6A5A8TX70 2615 aa4.77□□□□□ -1.65
HERPUD1-209ENST00000564678 PRB2P02812 416 aaPredicted RBP4.77□□□□□ -1.65
HERPUD1-209ENST00000564678 SLPIP03973 132 aa4.77□□□□□ -1.65
HERPUD1-209ENST00000564678 TLX1NBP0CAT3 122 aa4.77□□□□□ -1.65
HERPUD1-209ENST00000564678 KRTAP4-12Q9BQ66 201 aa4.77□□□□□ -1.65
HERPUD1-209ENST00000564678 XAGE1AQ9HD64 81 aa4.77□□□□□ -1.65
HERPUD1-209ENST00000564678 HUWE1Q7Z6Z7 4374 aaKnown RBP4.76□□□□□ -1.65
HERPUD1-209ENST00000564678 TENM3Q9P273 2699 aa4.76□□□□□ -1.65
HERPUD1-209ENST00000564678 TRAV23DV6A0A075B6W5 121 aa4.76□□□□□ -1.65
HERPUD1-209ENST00000564678 TRBV7-7A0A0K0K1E9 115 aa4.76□□□□□ -1.65
HERPUD1-209ENST00000564678 TRBV10-3A0A0K0K1G6 114 aa4.76□□□□□ -1.65
HERPUD1-209ENST00000564678 DIRC1Q969H9 104 aa4.76□□□□□ -1.65
HERPUD1-209ENST00000564678 DNHD1Q96M86 4753 aa4.76□□□□□ -1.65
HERPUD1-209ENST00000564678 ZNF73O43830 326 aaPredicted RBP4.75□□□□□ -1.65
HERPUD1-209ENST00000564678 TTC32Q5I0X7 151 aa4.75□□□□□ -1.65
HERPUD1-209ENST00000564678 C9orf129Q5T035 196 aaKnown RBP4.75□□□□□ -1.65
HERPUD1-209ENST00000564678 C14orf132Q9NPU4 83 aa4.75□□□□□ -1.65
HERPUD1-209ENST00000564678 CCKP06307 115 aa4.74□□□□□ -1.65
HERPUD1-209ENST00000564678 NOTCH1P46531 2555 aa4.74□□□□□ -1.65
HERPUD1-209ENST00000564678 ELOF1P60002 83 aaKnown RBP4.74□□□□□ -1.65
HERPUD1-209ENST00000564678 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.74□□□□□ -1.65
HERPUD1-209ENST00000564678 COX7BP24311 80 aa4.73□□□□□ -1.65
HERPUD1-209ENST00000564678 KRTAP3-1Q9BYR8 98 aa4.73□□□□□ -1.65
HERPUD1-209ENST00000564678 SMCR5Q8TEV8 140 aa4.72□□□□□ -1.65
HERPUD1-209ENST00000564678 PDE6GP18545 87 aa4.72□□□□□ -1.65
HERPUD1-209ENST00000564678 NDUFV3P56181 108 aaKnown RBP4.72□□□□□ -1.65
HERPUD1-209ENST00000564678 C1orf195Q5TG92 126 aa4.72□□□□□ -1.65
HERPUD1-209ENST00000564678 RBM3P98179 157 aaKnown RBP4.71□□□□□ -1.65
HERPUD1-209ENST00000564678 Q6ZQY7 126 aa4.71□□□□□ -1.65
HERPUD1-209ENST00000564678 SMIM20Q8N5G0 67 aa4.71□□□□□ -1.65
HERPUD1-209ENST00000564678 B9D2Q9BPU9 175 aa4.71□□□□□ -1.65
HERPUD1-209ENST00000564678 ANAPC13Q9BS18 74 aa4.71□□□□□ -1.65
HERPUD1-209ENST00000564678 NKAPP1Q8N9T2 125 aa4.71□□□□□ -1.66
HERPUD1-209ENST00000564678 KCNQ1DNQ9H478 68 aa4.71□□□□□ -1.66
HERPUD1-209ENST00000564678 NBEAL1Q6ZS30 2694 aa4.71□□□□□ -1.66
HERPUD1-209ENST00000564678 LOC110117498A0A087WWA1 95 aa4.7□□□□□ -1.66
HERPUD1-209ENST00000564678 LINC00846Q9NV44 126 aa4.7□□□□□ -1.66
HERPUD1-209ENST00000564678 DNAH1Q9P2D7 4330 aa4.7□□□□□ -1.66
HERPUD1-209ENST00000564678 Q6JHZ5 121 aa4.7□□□□□ -1.66
HERPUD1-209ENST00000564678 LAMTOR3Q9UHA4 124 aa4.7□□□□□ -1.66
HERPUD1-209ENST00000564678 DSCR8Q96T75 97 aa4.69□□□□□ -1.66
HERPUD1-209ENST00000564678 APLNQ9ULZ1 77 aa4.69□□□□□ -1.66
HERPUD1-209ENST00000564678 LOC107984640A0A0U1RRK4 108 aa4.68□□□□□ -1.66
HERPUD1-209ENST00000564678 Q6ZQT0 140 aa4.68□□□□□ -1.66
HERPUD1-209ENST00000564678 PRO0628Q9UI54 55 aa4.68□□□□□ -1.66
HERPUD1-209ENST00000564678 DNAH9Q9NYC9 4486 aa4.68□□□□□ -1.66
HERPUD1-209ENST00000564678 MGAM2Q2M2H8 2515 aa4.68□□□□□ -1.66
HERPUD1-209ENST00000564678 CASC10Q5T4H9 136 aa4.68□□□□□ -1.66
HERPUD1-209ENST00000564678 C7orf33Q8WU49 177 aa4.68□□□□□ -1.66
HERPUD1-209ENST00000564678 RPL37AP8A6NKH3 93 aa4.67□□□□□ -1.66
HERPUD1-209ENST00000564678 ATP5EP2Q5VTU8 51 aa4.67□□□□□ -1.66
HERPUD1-209ENST00000564678 IGLV1-50A0A075B6I6 118 aa4.67□□□□□ -1.66
HERPUD1-209ENST00000564678 UBE2DNLQ8IWF7 75 aa4.67□□□□□ -1.66
HERPUD1-209ENST00000564678 UBL5Q9BZL1 73 aa4.67□□□□□ -1.66
HERPUD1-209ENST00000564678 SPRR1AP35321 89 aa4.66□□□□□ -1.66
HERPUD1-209ENST00000564678 CNBPP62633 177 aaKnown RBP4.66□□□□□ -1.66
HERPUD1-209ENST00000564678 C14orf177Q52M58 125 aa4.66□□□□□ -1.66
HERPUD1-209ENST00000564678 DHRS4-AS1Q9P1J3 65 aa4.66□□□□□ -1.66
HERPUD1-209ENST00000564678 TRBV7-4A0A0J9YYF1 115 aa4.65□□□□□ -1.66
HERPUD1-209ENST00000564678 FAM236AA0A1B0GUQ0 79 aa4.65□□□□□ -1.66
HERPUD1-209ENST00000564678 FAM236BA0A1B0GV22 79 aa4.65□□□□□ -1.66
HERPUD1-209ENST00000564678 NUPR2A6NF83 97 aa4.65□□□□□ -1.67
HERPUD1-209ENST00000564678 KRTAP4-16G5E9R7 235 aaPredicted RBP4.65□□□□□ -1.67
HERPUD1-209ENST00000564678 PKIGQ9Y2B9 76 aa4.65□□□□□ -1.67
HERPUD1-209ENST00000564678 DYNC2H1Q8NCM8 4307 aaKnown RBP4.64□□□□□ -1.67
HERPUD1-209ENST00000564678 PSCAO43653 123 aa4.64□□□□□ -1.67
HERPUD1-209ENST00000564678 HIST1H4AP62805 103 aaKnown RBP4.64□□□□□ -1.67
HERPUD1-209ENST00000564678 Q6ZRX8 168 aa4.64□□□□□ -1.67
HERPUD1-209ENST00000564678 KRTAP1-5Q9BYS1 174 aa4.64□□□□□ -1.67
HERPUD1-209ENST00000564678 C16orf90A8MZG2 172 aa4.64□□□□□ -1.67
HERPUD1-209ENST00000564678 IGKV3D-7A0A0C4DH55 119 aa4.63□□□□□ -1.67
HERPUD1-209ENST00000564678 ETDCA0A1B0GVM5 59 aa4.63□□□□□ -1.67
HERPUD1-209ENST00000564678 C8orf87E5RJ46 101 aa4.63□□□□□ -1.67
HERPUD1-209ENST00000564678 KRTAP7-1Q8IUC3 87 aa4.63□□□□□ -1.67
HERPUD1-209ENST00000564678 SS18L2Q9UHA2 77 aa4.63□□□□□ -1.67
HERPUD1-209ENST00000564678 FAM168BA1KXE4 195 aa4.63□□□□□ -1.67
HERPUD1-209ENST00000564678 ATOX1O00244 68 aa4.63□□□□□ -1.67
HERPUD1-209ENST00000564678 LINC01547P58512 204 aaPredicted RBP4.63□□□□□ -1.67
HERPUD1-209ENST00000564678 SMIM26A0A096LP01 95 aa4.62□□□□□ -1.67
HERPUD1-209ENST00000564678 A0A1B0GW54 56 aa4.62□□□□□ -1.67
HERPUD1-209ENST00000564678 H0Y9J4 135 aa4.62□□□□□ -1.67
HERPUD1-209ENST00000564678 OCR1Q9BZK8 76 aa4.61□□□□□ -1.67
HERPUD1-209ENST00000564678 IGLV5-48A0A075B6I7 105 aa4.61□□□□□ -1.67
HERPUD1-209ENST00000564678 NBDYA0A0U1RRE5 68 aa4.61□□□□□ -1.67
HERPUD1-209ENST00000564678 Q8N377 158 aa4.61□□□□□ -1.67
HERPUD1-209ENST00000564678 PRKDCP78527 4128 aaKnown RBP4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms