RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 IGLV9-49A0A0B4J1Y8 123 aa8.47□□□□□ -1.05
SPG7-210ENST00000564409 SLC25A20O43772 301 aa8.47□□□□□ -1.05
SPG7-210ENST00000564409 ZNF73O43830 326 aaPredicted RBP8.47□□□□□ -1.05
SPG7-210ENST00000564409 ADAMTSL4-AS1Q5T5F5 129 aa8.46□□□□□ -1.06
SPG7-210ENST00000564409 MUC17Q685J3 4493 aa8.46□□□□□ -1.06
SPG7-210ENST00000564409 SYS1-DBNDD2H3BUS1 97 aa8.45□□□□□ -1.06
SPG7-210ENST00000564409 TIMM17BO60830 172 aa8.45□□□□□ -1.06
SPG7-210ENST00000564409 SOSTDC1Q6X4U4 206 aa8.45□□□□□ -1.06
SPG7-210ENST00000564409 Q8N377 158 aa8.45□□□□□ -1.06
SPG7-210ENST00000564409 KRTAP9-2Q9BYQ4 174 aa8.45□□□□□ -1.06
SPG7-210ENST00000564409 SPANXCQ9NY87 97 aa8.45□□□□□ -1.06
SPG7-210ENST00000564409 ASB16-AS1Q495Z4 193 aa8.44□□□□□ -1.06
SPG7-210ENST00000564409 EIF4EBP3O60516 100 aaPredicted RBP8.42□□□□□ -1.06
SPG7-210ENST00000564409 SEC61BP60468 96 aaKnown RBP8.42□□□□□ -1.06
SPG7-210ENST00000564409 NPC2P61916 151 aa8.42□□□□□ -1.06
SPG7-210ENST00000564409 LINC01545Q5VT33 79 aa8.42□□□□□ -1.06
SPG7-210ENST00000564409 SLC25A34Q6PIV7 304 aa8.42□□□□□ -1.06
SPG7-210ENST00000564409 LINC00308Q8TCZ7 52 aa8.42□□□□□ -1.06
SPG7-210ENST00000564409 FAT4Q6V0I7 4981 aa8.41□□□□□ -1.06
SPG7-210ENST00000564409 HIST1H2BKO60814 126 aa8.41□□□□□ -1.06
SPG7-210ENST00000564409 HIST1H2BJP06899 126 aa8.41□□□□□ -1.06
SPG7-210ENST00000564409 HIST1H2BOP23527 126 aa8.41□□□□□ -1.06
SPG7-210ENST00000564409 HIST1H2BBP33778 126 aa8.41□□□□□ -1.06
SPG7-210ENST00000564409 HIST1H2BDP58876 126 aa8.41□□□□□ -1.06
SPG7-210ENST00000564409 HIST1H2BCP62807 126 aa8.41□□□□□ -1.06
SPG7-210ENST00000564409 HIST2H2BEQ16778 126 aa8.41□□□□□ -1.06
SPG7-210ENST00000564409 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.41□□□□□ -1.06
SPG7-210ENST00000564409 C9orf153Q5TBE3 101 aa8.41□□□□□ -1.06
SPG7-210ENST00000564409 PET117Q6UWS5 81 aa8.41□□□□□ -1.06
SPG7-210ENST00000564409 HIST1H2BHQ93079 126 aa8.41□□□□□ -1.06
SPG7-210ENST00000564409 LITAFQ99732 161 aa8.41□□□□□ -1.06
SPG7-210ENST00000564409 HIST1H2BNQ99877 126 aa8.41□□□□□ -1.06
SPG7-210ENST00000564409 HIST1H2BMQ99879 126 aa8.41□□□□□ -1.06
SPG7-210ENST00000564409 DHRS4-AS1Q9P1J3 65 aa8.41□□□□□ -1.06
SPG7-210ENST00000564409 LINC00518Q8N0U6 118 aa8.4□□□□□ -1.06
SPG7-210ENST00000564409 SPANXDQ9BXN6 97 aa8.4□□□□□ -1.06
SPG7-210ENST00000564409 SPRR1BP22528 89 aa8.39□□□□□ -1.07
SPG7-210ENST00000564409 OR13C6PQ8NH95 151 aa8.39□□□□□ -1.07
SPG7-210ENST00000564409 ZNF815PA8K554 130 aa8.38□□□□□ -1.07
SPG7-210ENST00000564409 S100A1P23297 94 aa8.38□□□□□ -1.07
SPG7-210ENST00000564409 ST20-AS1Q8NBB2 130 aa8.36□□□□□ -1.07
SPG7-210ENST00000564409 COPS9Q8WXC6 57 aa8.36□□□□□ -1.07
SPG7-210ENST00000564409 LIMD2Q9BT23 127 aa8.35□□□□□ -1.07
SPG7-210ENST00000564409 LAMTOR3Q9UHA4 124 aa8.35□□□□□ -1.07
SPG7-210ENST00000564409 TRBV7-6A0A0J9YX20 115 aa8.34□□□□□ -1.07
SPG7-210ENST00000564409 ELOF1P60002 83 aaKnown RBP8.34□□□□□ -1.07
SPG7-210ENST00000564409 C3orf79P0CE67 100 aa8.33□□□□□ -1.08
SPG7-210ENST00000564409 COX7BP24311 80 aa8.33□□□□□ -1.08
SPG7-210ENST00000564409 COA6Q5JTJ3 125 aaKnown RBP8.33□□□□□ -1.08
SPG7-210ENST00000564409 XP32Q5T750 250 aa8.33□□□□□ -1.08
SPG7-210ENST00000564409 AKR1D1P51857 326 aa8.32□□□□□ -1.08
SPG7-210ENST00000564409 C20orf202A1L168 122 aa8.31□□□□□ -1.08
SPG7-210ENST00000564409 IFITM1P13164 125 aa8.31□□□□□ -1.08
SPG7-210ENST00000564409 LINC01547P58512 204 aaPredicted RBP8.31□□□□□ -1.08
SPG7-210ENST00000564409 CD164Q04900 197 aa8.31□□□□□ -1.08
SPG7-210ENST00000564409 C6orf99Q4VX62 202 aa8.31□□□□□ -1.08
SPG7-210ENST00000564409 Q6ZVH6 145 aa8.31□□□□□ -1.08
SPG7-210ENST00000564409 SCGB1D4Q6XE38 83 aa8.3□□□□□ -1.08
SPG7-210ENST00000564409 KRTDAPP60985 99 aa8.29□□□□□ -1.08
SPG7-210ENST00000564409 TAL2Q16559 108 aa8.29□□□□□ -1.08
SPG7-210ENST00000564409 TTTY13Q9BZ97 58 aa8.29□□□□□ -1.08
SPG7-210ENST00000564409 TEX49A0A1B0GTD5 131 aa8.28□□□□□ -1.08
SPG7-210ENST00000564409 A0A1B0GWB2 263 aa8.28□□□□□ -1.08
SPG7-210ENST00000564409 PRO1933Q9H354 126 aa8.27□□□□□ -1.09
SPG7-210ENST00000564409 A4D1N5 150 aa8.26□□□□□ -1.09
SPG7-210ENST00000564409 KRTAP4-1Q9BYQ7 146 aa8.25□□□□□ -1.09
SPG7-210ENST00000564409 KRTAP9-6A0A140TA67 174 aa8.24□□□□□ -1.09
SPG7-210ENST00000564409 SNRPEP62304 92 aaKnown RBP8.24□□□□□ -1.09
SPG7-210ENST00000564409 Q5XG85 94 aa8.24□□□□□ -1.09
SPG7-210ENST00000564409 DEFB105AQ8NG35 78 aa8.24□□□□□ -1.09
SPG7-210ENST00000564409 IGLV5-48A0A075B6I7 105 aa8.23□□□□□ -1.09
SPG7-210ENST00000564409 A6NDN8 102 aa8.23□□□□□ -1.09
SPG7-210ENST00000564409 H7C2G1 150 aa8.23□□□□□ -1.09
SPG7-210ENST00000564409 Q1RN00 199 aa8.23□□□□□ -1.09
SPG7-210ENST00000564409 HRCT1Q6UXD1 115 aa8.23□□□□□ -1.09
SPG7-210ENST00000564409 NHP2Q9NX24 153 aaKnown RBP8.23□□□□□ -1.09
SPG7-210ENST00000564409 TRAV13-2A0A0B4J235 113 aa8.22□□□□□ -1.09
SPG7-210ENST00000564409 ANKRD39Q53RE8 183 aa8.22□□□□□ -1.09
SPG7-210ENST00000564409 SMIM29Q86T20 159 aa8.2□□□□□ -1.1
SPG7-210ENST00000564409 MUSTN1Q8IVN3 82 aa8.2□□□□□ -1.1
SPG7-210ENST00000564409 PCP2Q8IVA1 136 aa8.18□□□□□ -1.1
SPG7-210ENST00000564409 ATOH7Q8N100 152 aa8.18□□□□□ -1.1
SPG7-210ENST00000564409 S100A6P06703 90 aa8.16□□□□□ -1.1
SPG7-210ENST00000564409 S100A2P29034 98 aa8.16□□□□□ -1.1
SPG7-210ENST00000564409 VAMP3Q15836 100 aa8.16□□□□□ -1.1
SPG7-210ENST00000564409 SMIM11BQ8TCY0 68 aa8.16□□□□□ -1.1
SPG7-210ENST00000564409 C9orf92A6NGG3 77 aa8.15□□□□□ -1.1
SPG7-210ENST00000564409 PCOTHQ58A44 107 aa8.15□□□□□ -1.1
SPG7-210ENST00000564409 C1orf195Q5TG92 126 aa8.14□□□□□ -1.11
SPG7-210ENST00000564409 TCL1BO95988 128 aa8.13□□□□□ -1.11
SPG7-210ENST00000564409 IGLV8-61A0A075B6I0 122 aa8.12□□□□□ -1.11
SPG7-210ENST00000564409 HSBP1L1C9JCN9 74 aa8.12□□□□□ -1.11
SPG7-210ENST00000564409 F8WEM9 126 aa8.12□□□□□ -1.11
SPG7-210ENST00000564409 LCE2DQ5TA82 110 aaPredicted RBP8.11□□□□□ -1.11
SPG7-210ENST00000564409 HIST3H2BBQ8N257 126 aa8.11□□□□□ -1.11
SPG7-210ENST00000564409 LCE2CQ5TA81 110 aa8.1□□□□□ -1.11
SPG7-210ENST00000564409 LINC00575Q6W349 94 aa8.1□□□□□ -1.11
SPG7-210ENST00000564409 Q6JHZ5 121 aa8.09□□□□□ -1.11
SPG7-210ENST00000564409 HIST1H2BLQ99880 126 aa8.09□□□□□ -1.11
SPG7-210ENST00000564409 hADV29S1A0JD25 119 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms