RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 FAM30AQ9NZY2 134 aa8.06□□□□□ -1.12
CLK3-214ENST00000564096 PKD1P98161 4303 aa8.05□□□□□ -1.12
CLK3-214ENST00000564096 ZNF73O43830 326 aaPredicted RBP8.05□□□□□ -1.12
CLK3-214ENST00000564096 RPL28P46779 137 aaKnown RBP8.05□□□□□ -1.12
CLK3-214ENST00000564096 SMIM11BQ8TCY0 68 aa8.05□□□□□ -1.12
CLK3-214ENST00000564096 C9orf118A6NHY6 69 aa8.04□□□□□ -1.12
CLK3-214ENST00000564096 TAX1BP3O14907 124 aa8.04□□□□□ -1.12
CLK3-214ENST00000564096 VAMP3Q15836 100 aa8.04□□□□□ -1.12
CLK3-214ENST00000564096 REG3GQ6UW15 175 aa8.04□□□□□ -1.12
CLK3-214ENST00000564096 C6orf99Q4VX62 202 aa8.03□□□□□ -1.12
CLK3-214ENST00000564096 ETDCA0A1B0GVM5 59 aa8.02□□□□□ -1.13
CLK3-214ENST00000564096 H3BUT2 72 aa8.02□□□□□ -1.13
CLK3-214ENST00000564096 TRIAP1O43715 76 aa8.02□□□□□ -1.13
CLK3-214ENST00000564096 TRBV7-6A0A0J9YX20 115 aa8.01□□□□□ -1.13
CLK3-214ENST00000564096 SCGB1C2P0DMR2 95 aa8.01□□□□□ -1.13
CLK3-214ENST00000564096 FABP2P12104 132 aa8.01□□□□□ -1.13
CLK3-214ENST00000564096 H0YGX0 51 aa8□□□□□ -1.13
CLK3-214ENST00000564096 SNCGO76070 127 aa8□□□□□ -1.13
CLK3-214ENST00000564096 COX7BP24311 80 aa8□□□□□ -1.13
CLK3-214ENST00000564096 A0A1W2PPM0 123 aa7.99□□□□□ -1.13
CLK3-214ENST00000564096 SPRR1AP35321 89 aa7.99□□□□□ -1.13
CLK3-214ENST00000564096 HAMPP81172 84 aa7.99□□□□□ -1.13
CLK3-214ENST00000564096 NAA38Q9BRA0 125 aaKnown RBP7.99□□□□□ -1.13
CLK3-214ENST00000564096 DYNC1H1Q14204 4646 aaKnown RBP7.99□□□□□ -1.13
CLK3-214ENST00000564096 BCE1O60756 84 aa7.98□□□□□ -1.13
CLK3-214ENST00000564096 ELOF1P60002 83 aaKnown RBP7.98□□□□□ -1.13
CLK3-214ENST00000564096 FAM19A1Q7Z5A9 133 aa7.98□□□□□ -1.13
CLK3-214ENST00000564096 DNAH8Q96JB1 4490 aa7.98□□□□□ -1.13
CLK3-214ENST00000564096 PKHD1P08F94 4074 aa7.98□□□□□ -1.13
CLK3-214ENST00000564096 LRP1BQ9NZR2 4599 aa7.97□□□□□ -1.13
CLK3-214ENST00000564096 SLC25A20O43772 301 aa7.97□□□□□ -1.13
CLK3-214ENST00000564096 CDK2AP2O75956 126 aa7.97□□□□□ -1.13
CLK3-214ENST00000564096 UBE2AP49459 152 aa7.97□□□□□ -1.13
CLK3-214ENST00000564096 Q6ZRX8 168 aa7.97□□□□□ -1.13
CLK3-214ENST00000564096 TRBV20-1A0A075B6N2 111 aa7.96□□□□□ -1.14
CLK3-214ENST00000564096 C1orf137Q5JT78 98 aa7.96□□□□□ -1.14
CLK3-214ENST00000564096 PSORS1C2Q9UIG4 136 aa7.96□□□□□ -1.14
CLK3-214ENST00000564096 ATXN8Q156A1 80 aa7.95□□□□□ -1.14
CLK3-214ENST00000564096 DHRS4-AS1Q9P1J3 65 aa7.95□□□□□ -1.14
CLK3-214ENST00000564096 A0A1B0GX51 115 aa7.94□□□□□ -1.14
CLK3-214ENST00000564096 B5MCH6 92 aa7.94□□□□□ -1.14
CLK3-214ENST00000564096 KRTAP4-16G5E9R7 235 aaPredicted RBP7.94□□□□□ -1.14
CLK3-214ENST00000564096 H0Y9J4 135 aa7.94□□□□□ -1.14
CLK3-214ENST00000564096 DNAL4O96015 105 aa7.94□□□□□ -1.14
CLK3-214ENST00000564096 XGP55808 180 aa7.94□□□□□ -1.14
CLK3-214ENST00000564096 KRTAP11-1Q8IUC1 163 aa7.94□□□□□ -1.14
CLK3-214ENST00000564096 SPCS1Q9Y6A9 102 aa7.94□□□□□ -1.14
CLK3-214ENST00000564096 PRLHP81277 87 aa7.93□□□□□ -1.14
CLK3-214ENST00000564096 LST1O00453 97 aa7.92□□□□□ -1.14
CLK3-214ENST00000564096 INAFM2P0DMQ5 153 aa7.92□□□□□ -1.14
CLK3-214ENST00000564096 RPL37AP61513 92 aaKnown RBP7.92□□□□□ -1.14
CLK3-214ENST00000564096 LINC00575Q6W349 94 aa7.92□□□□□ -1.14
CLK3-214ENST00000564096 GTF2H5Q6ZYL4 71 aa7.92□□□□□ -1.14
CLK3-214ENST00000564096 CLEC2BQ92478 149 aa7.92□□□□□ -1.14
CLK3-214ENST00000564096 hADV29S1A0JD25 119 aa7.91□□□□□ -1.14
CLK3-214ENST00000564096 K7EP34 96 aa7.91□□□□□ -1.14
CLK3-214ENST00000564096 TRACP01848 142 aa7.91□□□□□ -1.14
CLK3-214ENST00000564096 TCL1BO95988 128 aa7.9□□□□□ -1.14
CLK3-214ENST00000564096 GHRHP01286 108 aa7.9□□□□□ -1.14
CLK3-214ENST00000564096 HIGD2AQ9BW72 106 aa7.9□□□□□ -1.14
CLK3-214ENST00000564096 IGLV7-43P04211 117 aa7.89□□□□□ -1.15
CLK3-214ENST00000564096 FAM218AQ96MZ4 157 aa7.89□□□□□ -1.15
CLK3-214ENST00000564096 ZNF861PO60384 105 aa7.88□□□□□ -1.15
CLK3-214ENST00000564096 LCE2CQ5TA81 110 aa7.88□□□□□ -1.15
CLK3-214ENST00000564096 KRTAP13-1Q8IUC0 172 aa7.88□□□□□ -1.15
CLK3-214ENST00000564096 APOBP04114 4563 aaKnown RBP7.88□□□□□ -1.15
CLK3-214ENST00000564096 PLA2G1BP04054 148 aaKnown RBP7.87□□□□□ -1.15
CLK3-214ENST00000564096 OCIAD2Q56VL3 154 aa7.87□□□□□ -1.15
CLK3-214ENST00000564096 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.87□□□□□ -1.15
CLK3-214ENST00000564096 SMCR5Q8TEV8 140 aa7.87□□□□□ -1.15
CLK3-214ENST00000564096 Q9BRP9 147 aa7.87□□□□□ -1.15
CLK3-214ENST00000564096 ZNF706Q9Y5V0 76 aaPredicted RBP7.87□□□□□ -1.15
CLK3-214ENST00000564096 A0A1B0GV90 55 aa7.86□□□□□ -1.15
CLK3-214ENST00000564096 H3BQ85 93 aa7.86□□□□□ -1.15
CLK3-214ENST00000564096 FAM229AH3BQW9 127 aa7.86□□□□□ -1.15
CLK3-214ENST00000564096 SMR3BP02814 79 aaPredicted RBP7.86□□□□□ -1.15
CLK3-214ENST00000564096 Q6ZQY7 126 aa7.85□□□□□ -1.15
CLK3-214ENST00000564096 ORMDL1Q9P0S3 153 aa7.85□□□□□ -1.15
CLK3-214ENST00000564096 HERC2O95714 4834 aa7.84□□□□□ -1.15
CLK3-214ENST00000564096 H3BMG7 143 aa7.84□□□□□ -1.15
CLK3-214ENST00000564096 LCE2AQ5TA79 106 aaPredicted RBP7.84□□□□□ -1.15
CLK3-214ENST00000564096 PPDPFLQ8WWR9 84 aa7.83□□□□□ -1.16
CLK3-214ENST00000564096 C9JAW5 83 aa7.82□□□□□ -1.16
CLK3-214ENST00000564096 RYR1P21817 5038 aa7.81□□□□□ -1.16
CLK3-214ENST00000564096 H3BT86 120 aa7.81□□□□□ -1.16
CLK3-214ENST00000564096 Q5VSD8 79 aa7.81□□□□□ -1.16
CLK3-214ENST00000564096 PCLOQ9Y6V0 5065 aa7.81□□□□□ -1.16
CLK3-214ENST00000564096 ERC2-IT1O76042 136 aa7.8□□□□□ -1.16
CLK3-214ENST00000564096 SPINK6Q6UWN8 80 aa7.8□□□□□ -1.16
CLK3-214ENST00000564096 IGLV5-48A0A075B6I7 105 aa7.79□□□□□ -1.16
CLK3-214ENST00000564096 TEX49A0A1B0GTD5 131 aa7.79□□□□□ -1.16
CLK3-214ENST00000564096 TMEM256-PLSCR3K7ERE1 68 aa7.79□□□□□ -1.16
CLK3-214ENST00000564096 UBE2V1Q13404 147 aa7.79□□□□□ -1.16
CLK3-214ENST00000564096 ST20-AS1Q8NBB2 130 aa7.78□□□□□ -1.16
CLK3-214ENST00000564096 DEFB105AQ8NG35 78 aa7.78□□□□□ -1.16
CLK3-214ENST00000564096 SPRR4Q96PI1 79 aa7.78□□□□□ -1.16
CLK3-214ENST00000564096 F8W1H4 67 aa7.77□□□□□ -1.17
CLK3-214ENST00000564096 BAALC-AS2P0C853 105 aa7.77□□□□□ -1.17
CLK3-214ENST00000564096 GAGE2AQ6NT46 116 aa7.77□□□□□ -1.17
CLK3-214ENST00000564096 Q8N1X5 172 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms