RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 IGLC3P0DOY3 106 aa5.2□□□□□ -1.58
HDGFL3-204ENST00000563790 ZNF22P17026 224 aaPredicted RBP5.2□□□□□ -1.58
HDGFL3-204ENST00000563790 RAB14P61106 215 aa5.2□□□□□ -1.58
HDGFL3-204ENST00000563790 COX17Q14061 63 aa5.2□□□□□ -1.58
HDGFL3-204ENST00000563790 A0A096LNJ9 63 aa5.19□□□□□ -1.58
HDGFL3-204ENST00000563790 RPL24P83731 157 aaKnown RBP5.19□□□□□ -1.58
HDGFL3-204ENST00000563790 PMVKQ15126 192 aa5.19□□□□□ -1.58
HDGFL3-204ENST00000563790 KIAA1644Q3SXP7 199 aa5.19□□□□□ -1.58
HDGFL3-204ENST00000563790 ZNF706Q9Y5V0 76 aaPredicted RBP5.19□□□□□ -1.58
HDGFL3-204ENST00000563790 ERC2-IT1O76042 136 aa5.18□□□□□ -1.58
HDGFL3-204ENST00000563790 G0S2P27469 103 aa5.18□□□□□ -1.58
HDGFL3-204ENST00000563790 KCNQ1DNQ9H478 68 aa5.18□□□□□ -1.58
HDGFL3-204ENST00000563790 MOBPQ13875 183 aa5.17□□□□□ -1.58
HDGFL3-204ENST00000563790 Q8N9P0 234 aaPredicted RBP5.17□□□□□ -1.58
HDGFL3-204ENST00000563790 H3BRM9 83 aa5.16□□□□□ -1.58
HDGFL3-204ENST00000563790 PRYO14603 147 aa5.16□□□□□ -1.58
HDGFL3-204ENST00000563790 SSBP3-AS1Q7Z2R9 100 aa5.16□□□□□ -1.58
HDGFL3-204ENST00000563790 Q9BRP9 147 aa5.15□□□□□ -1.59
HDGFL3-204ENST00000563790 LINC01549A6NIU2 74 aa5.14□□□□□ -1.59
HDGFL3-204ENST00000563790 C11orf86A6NJI1 115 aa5.14□□□□□ -1.59
HDGFL3-204ENST00000563790 GAGE2AQ6NT46 116 aa5.14□□□□□ -1.59
HDGFL3-204ENST00000563790 URB1-AS1Q96HZ7 61 aa5.14□□□□□ -1.59
HDGFL3-204ENST00000563790 IGLV9-49A0A0B4J1Y8 123 aa5.13□□□□□ -1.59
HDGFL3-204ENST00000563790 MT-ND4LP03901 98 aa5.13□□□□□ -1.59
HDGFL3-204ENST00000563790 KRTAP10-5P60370 271 aa5.13□□□□□ -1.59
HDGFL3-204ENST00000563790 TRBV10-3A0A0K0K1G6 114 aa5.12□□□□□ -1.59
HDGFL3-204ENST00000563790 NCR3O14931 201 aa5.11□□□□□ -1.59
HDGFL3-204ENST00000563790 C6orf99Q4VX62 202 aa5.11□□□□□ -1.59
HDGFL3-204ENST00000563790 A0A0U1RRA0 63 aa5.1□□□□□ -1.59
HDGFL3-204ENST00000563790 LINC00158P58513 81 aa5.1□□□□□ -1.59
HDGFL3-204ENST00000563790 SFTA2Q6UW10 78 aa5.1□□□□□ -1.59
HDGFL3-204ENST00000563790 BOD1L2Q8IYS8 172 aa5.1□□□□□ -1.59
HDGFL3-204ENST00000563790 ETDCA0A1B0GVM5 59 aa5.09□□□□□ -1.59
HDGFL3-204ENST00000563790 SMIM13P0DJ93 91 aa5.09□□□□□ -1.59
HDGFL3-204ENST00000563790 Q6ZRX8 168 aa5.09□□□□□ -1.59
HDGFL3-204ENST00000563790 TRAV9-1A0A075B6T8 112 aa5.08□□□□□ -1.6
HDGFL3-204ENST00000563790 LOC107984156A0A0G2JMH3 177 aa5.08□□□□□ -1.6
HDGFL3-204ENST00000563790 TMEM223A0PJW6 202 aa5.08□□□□□ -1.6
HDGFL3-204ENST00000563790 CLLU1Q5K131 121 aa5.08□□□□□ -1.6
HDGFL3-204ENST00000563790 ARL17AQ8IVW1 177 aa5.08□□□□□ -1.6
HDGFL3-204ENST00000563790 MIR7-3HGQ8N6C7 128 aa5.08□□□□□ -1.6
HDGFL3-204ENST00000563790 TMEM170BQ5T4T1 132 aa5.07□□□□□ -1.6
HDGFL3-204ENST00000563790 FA2HQ7L5A8 372 aa5.07□□□□□ -1.6
HDGFL3-204ENST00000563790 PMCHL1Q16048 86 aa5.06□□□□□ -1.6
HDGFL3-204ENST00000563790 UQCC3Q6UW78 93 aa5.06□□□□□ -1.6
HDGFL3-204ENST00000563790 TRBV20-1A0A075B6N2 111 aa5.05□□□□□ -1.6
HDGFL3-204ENST00000563790 NDUFA6P56556 154 aa5.05□□□□□ -1.6
HDGFL3-204ENST00000563790 BAGE3Q86Y29 109 aa5.05□□□□□ -1.6
HDGFL3-204ENST00000563790 ST20-AS1Q8NBB2 130 aa5.05□□□□□ -1.6
HDGFL3-204ENST00000563790 C18orf32Q8TCD1 76 aa5.05□□□□□ -1.6
HDGFL3-204ENST00000563790 HBDP02042 147 aa5.04□□□□□ -1.6
HDGFL3-204ENST00000563790 TRBV10-2A0A0K0K1G8 114 aa5.03□□□□□ -1.6
HDGFL3-204ENST00000563790 TMEM218A2RU14 115 aa5.03□□□□□ -1.6
HDGFL3-204ENST00000563790 SPRR1BP22528 89 aa5.03□□□□□ -1.6
HDGFL3-204ENST00000563790 DDTP30046 118 aa5.03□□□□□ -1.6
HDGFL3-204ENST00000563790 PCP4P48539 62 aa5.03□□□□□ -1.6
HDGFL3-204ENST00000563790 TSPEAR-AS2P59090 65 aa5.03□□□□□ -1.6
HDGFL3-204ENST00000563790 SMCO4Q9NRQ5 59 aa5.03□□□□□ -1.6
HDGFL3-204ENST00000563790 CHTOPQ9Y3Y2 248 aaKnown RBP5.03□□□□□ -1.6
HDGFL3-204ENST00000563790 LINC00614P0C842 121 aa5.02□□□□□ -1.61
HDGFL3-204ENST00000563790 KRTAP15-1Q3LI76 137 aa5.02□□□□□ -1.61
HDGFL3-204ENST00000563790 C9orf153Q5TBE3 101 aa5.02□□□□□ -1.61
HDGFL3-204ENST00000563790 PET117Q6UWS5 81 aa5.02□□□□□ -1.61
HDGFL3-204ENST00000563790 Q6ZVH6 145 aa5.02□□□□□ -1.61
HDGFL3-204ENST00000563790 S100PP25815 95 aa5.01□□□□□ -1.61
HDGFL3-204ENST00000563790 HERV-K104P63124 156 aa5.01□□□□□ -1.61
HDGFL3-204ENST00000563790 IFITM2Q01629 132 aa5.01□□□□□ -1.61
HDGFL3-204ENST00000563790 FABP9Q0Z7S8 132 aa5.01□□□□□ -1.61
HDGFL3-204ENST00000563790 SEC11CQ9BY50 192 aa5.01□□□□□ -1.61
HDGFL3-204ENST00000563790 AHNAKQ09666 5890 aaKnown RBP5□□□□□ -1.61
HDGFL3-204ENST00000563790 TRAV12-1A0A0B4J245 112 aa5□□□□□ -1.61
HDGFL3-204ENST00000563790 COX19Q49B96 90 aa5□□□□□ -1.61
HDGFL3-204ENST00000563790 MEIG1Q5JSS6 88 aa5□□□□□ -1.61
HDGFL3-204ENST00000563790 RPS10P5Q9NQ39 176 aa5□□□□□ -1.61
HDGFL3-204ENST00000563790 FAM236DA0A1B0GTK5 79 aa4.99□□□□□ -1.61
HDGFL3-204ENST00000563790 C5orf52A6NGY3 159 aa4.99□□□□□ -1.61
HDGFL3-204ENST00000563790 FAM236CP0DP71 79 aa4.99□□□□□ -1.61
HDGFL3-204ENST00000563790 C1orf195Q5TG92 126 aa4.99□□□□□ -1.61
HDGFL3-204ENST00000563790 Q5XG85 94 aa4.99□□□□□ -1.61
HDGFL3-204ENST00000563790 HRCT1Q6UXD1 115 aa4.99□□□□□ -1.61
HDGFL3-204ENST00000563790 SOSTDC1Q6X4U4 206 aa4.99□□□□□ -1.61
HDGFL3-204ENST00000563790 COMMD7Q86VX2 200 aa4.99□□□□□ -1.61
HDGFL3-204ENST00000563790 LIMD2Q9BT23 127 aa4.99□□□□□ -1.61
HDGFL3-204ENST00000563790 SPANXB1Q9NS25 103 aaPredicted RBP4.99□□□□□ -1.61
HDGFL3-204ENST00000563790 ZNF73O43830 326 aaPredicted RBP4.98□□□□□ -1.61
HDGFL3-204ENST00000563790 NDUFC2O95298 119 aa4.98□□□□□ -1.61
HDGFL3-204ENST00000563790 ATP11AUNQ6ZP68 121 aa4.98□□□□□ -1.61
HDGFL3-204ENST00000563790 TRAV23DV6A0A075B6W5 121 aa4.97□□□□□ -1.61
HDGFL3-204ENST00000563790 ATP6V1G1O75348 118 aa4.97□□□□□ -1.61
HDGFL3-204ENST00000563790 MT1BP07438 61 aa4.97□□□□□ -1.61
HDGFL3-204ENST00000563790 MYMXA0A1B0GTQ4 84 aa4.96□□□□□ -1.62
HDGFL3-204ENST00000563790 CD164Q04900 197 aa4.96□□□□□ -1.62
HDGFL3-204ENST00000563790 JOSD1Q15040 202 aaPredicted RBP4.96□□□□□ -1.62
HDGFL3-204ENST00000563790 RHEBQ15382 184 aa4.96□□□□□ -1.62
HDGFL3-204ENST00000563790 C10orf91Q5T1B1 145 aa4.96□□□□□ -1.62
HDGFL3-204ENST00000563790 IFI27L1Q96BM0 104 aa4.96□□□□□ -1.62
HDGFL3-204ENST00000563790 A8MWP4 228 aa4.95□□□□□ -1.62
HDGFL3-204ENST00000563790 LINC00587B1AMM8 73 aa4.95□□□□□ -1.62
HDGFL3-204ENST00000563790 NDUFA5Q16718 116 aa4.95□□□□□ -1.62
HDGFL3-204ENST00000563790 A4D1N5 150 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms