RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 IGLV1-50A0A075B6I6 118 aa13.87□□□□□ -0.19
LINC01960-201ENST00000563759 H0YGX0 51 aa13.87□□□□□ -0.19
LINC01960-201ENST00000563759 DNAH5Q8TE73 4624 aa13.86□□□□□ -0.19
LINC01960-201ENST00000563759 KCNQ1DNQ9H478 68 aa13.86□□□□□ -0.19
LINC01960-201ENST00000563759 LST1O00453 97 aa13.84□□□□□ -0.19
LINC01960-201ENST00000563759 A0A087WYN8 130 aa13.84□□□□□ -0.19
LINC01960-201ENST00000563759 PRYO14603 147 aa13.84□□□□□ -0.19
LINC01960-201ENST00000563759 PHF5AQ7RTV0 110 aaKnown RBP13.84□□□□□ -0.19
LINC01960-201ENST00000563759 UBE2BP63146 152 aa13.82□□□□□ -0.2
LINC01960-201ENST00000563759 FAM218AQ96MZ4 157 aa13.82□□□□□ -0.2
LINC01960-201ENST00000563759 COX7BP24311 80 aa13.79□□□□□ -0.2
LINC01960-201ENST00000563759 MTURNQ8N3F0 131 aa13.78□□□□□ -0.2
LINC01960-201ENST00000563759 TRBV7-6A0A0J9YX20 115 aa13.78□□□□□ -0.2
LINC01960-201ENST00000563759 ELOF1P60002 83 aaKnown RBP13.78□□□□□ -0.2
LINC01960-201ENST00000563759 PLAC8Q9NZF1 115 aa13.78□□□□□ -0.2
LINC01960-201ENST00000563759 KRTAP10-1P60331 282 aa13.77□□□□□ -0.21
LINC01960-201ENST00000563759 REG3GQ6UW15 175 aa13.77□□□□□ -0.21
LINC01960-201ENST00000563759 EPM2AB3EWF7 344 aa13.76□□□□□ -0.21
LINC01960-201ENST00000563759 ETDCA0A1B0GVM5 59 aa13.76□□□□□ -0.21
LINC01960-201ENST00000563759 C9JAW5 83 aa13.76□□□□□ -0.21
LINC01960-201ENST00000563759 DNAL4O96015 105 aa13.76□□□□□ -0.21
LINC01960-201ENST00000563759 TRACP01848 142 aa13.76□□□□□ -0.21
LINC01960-201ENST00000563759 SPRR1AP35321 89 aa13.75□□□□□ -0.21
LINC01960-201ENST00000563759 SNCGO76070 127 aa13.74□□□□□ -0.21
LINC01960-201ENST00000563759 PKHD1P08F94 4074 aa13.74□□□□□ -0.21
LINC01960-201ENST00000563759 A0A1B0GVY2 172 aa13.74□□□□□ -0.21
LINC01960-201ENST00000563759 LINC00575Q6W349 94 aa13.74□□□□□ -0.21
LINC01960-201ENST00000563759 FAM30AQ9NZY2 134 aa13.74□□□□□ -0.21
LINC01960-201ENST00000563759 SLC25A20O43772 301 aa13.73□□□□□ -0.21
LINC01960-201ENST00000563759 A0A1B0GX51 115 aa13.72□□□□□ -0.21
LINC01960-201ENST00000563759 Q6ZSA8 131 aa13.72□□□□□ -0.21
LINC01960-201ENST00000563759 KRTAP11-1Q8IUC1 163 aa13.72□□□□□ -0.21
LINC01960-201ENST00000563759 LINC00528Q8N1L1 170 aa13.72□□□□□ -0.21
LINC01960-201ENST00000563759 KRTAP4-16G5E9R7 235 aaPredicted RBP13.71□□□□□ -0.21
LINC01960-201ENST00000563759 hADV29S1A0JD25 119 aa13.7□□□□□ -0.22
LINC01960-201ENST00000563759 F8W1H4 67 aa13.7□□□□□ -0.22
LINC01960-201ENST00000563759 Q6ZRX8 168 aa13.7□□□□□ -0.22
LINC01960-201ENST00000563759 PRO0461Q9UI25 63 aa13.7□□□□□ -0.22
LINC01960-201ENST00000563759 B5MCH6 92 aa13.69□□□□□ -0.22
LINC01960-201ENST00000563759 RYR3Q15413 4870 aa13.68□□□□□ -0.22
LINC01960-201ENST00000563759 SCXQ7RTU7 201 aa13.68□□□□□ -0.22
LINC01960-201ENST00000563759 CIRBP-AS1Q8TBR5 109 aa13.68□□□□□ -0.22
LINC01960-201ENST00000563759 DNAH8Q96JB1 4490 aa13.68□□□□□ -0.22
LINC01960-201ENST00000563759 FAM19A1Q7Z5A9 133 aa13.67□□□□□ -0.22
LINC01960-201ENST00000563759 HAMPP81172 84 aa13.64□□□□□ -0.23
LINC01960-201ENST00000563759 DHRS4-AS1Q9P1J3 65 aa13.64□□□□□ -0.23
LINC01960-201ENST00000563759 H3BT86 120 aa13.63□□□□□ -0.23
LINC01960-201ENST00000563759 SMCPP49901 116 aaPredicted RBP13.63□□□□□ -0.23
LINC01960-201ENST00000563759 PRLHP81277 87 aa13.63□□□□□ -0.23
LINC01960-201ENST00000563759 ANKRD29Q8N6D5 301 aa13.63□□□□□ -0.23
LINC01960-201ENST00000563759 ORMDL1Q9P0S3 153 aa13.63□□□□□ -0.23
LINC01960-201ENST00000563759 Q6ZQY7 126 aa13.63□□□□□ -0.23
LINC01960-201ENST00000563759 INAFM2P0DMQ5 153 aa13.62□□□□□ -0.23
LINC01960-201ENST00000563759 Q9BRP9 147 aa13.62□□□□□ -0.23
LINC01960-201ENST00000563759 BCE1O60756 84 aa13.61□□□□□ -0.23
LINC01960-201ENST00000563759 BAALC-AS2P0C853 105 aa13.61□□□□□ -0.23
LINC01960-201ENST00000563759 UBE2AP49459 152 aa13.6□□□□□ -0.23
LINC01960-201ENST00000563759 PSORS1C2Q9UIG4 136 aa13.59□□□□□ -0.23
LINC01960-201ENST00000563759 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.59□□□□□ -0.23
LINC01960-201ENST00000563759 ETDBQ3ZM63 59 aa13.57□□□□□ -0.24
LINC01960-201ENST00000563759 HIGD2AQ9BW72 106 aa13.57□□□□□ -0.24
LINC01960-201ENST00000563759 H0Y9J4 135 aa13.56□□□□□ -0.24
LINC01960-201ENST00000563759 SMCR5Q8TEV8 140 aa13.56□□□□□ -0.24
LINC01960-201ENST00000563759 VPS25Q9BRG1 176 aa13.56□□□□□ -0.24
LINC01960-201ENST00000563759 LRP1BQ9NZR2 4599 aa13.56□□□□□ -0.24
LINC01960-201ENST00000563759 C1orf137Q5JT78 98 aa13.55□□□□□ -0.24
LINC01960-201ENST00000563759 LINC01600Q96MT4 127 aa13.54□□□□□ -0.24
LINC01960-201ENST00000563759 TMEM256-PLSCR3K7ERE1 68 aa13.53□□□□□ -0.24
LINC01960-201ENST00000563759 K7ERU9 68 aa13.53□□□□□ -0.24
LINC01960-201ENST00000563759 OCIAD2Q56VL3 154 aa13.53□□□□□ -0.24
LINC01960-201ENST00000563759 GHRHP01286 108 aa13.53□□□□□ -0.24
LINC01960-201ENST00000563759 TEN1Q86WV5 123 aa13.53□□□□□ -0.24
LINC01960-201ENST00000563759 ERC2-IT1O76042 136 aa13.52□□□□□ -0.25
LINC01960-201ENST00000563759 DYNC1H1Q14204 4646 aaKnown RBP13.52□□□□□ -0.25
LINC01960-201ENST00000563759 SCGB1A1P11684 91 aa13.5□□□□□ -0.25
LINC01960-201ENST00000563759 H3BQ85 93 aa13.5□□□□□ -0.25
LINC01960-201ENST00000563759 KRTAP13-1Q8IUC0 172 aa13.5□□□□□ -0.25
LINC01960-201ENST00000563759 DEFB105AQ8NG35 78 aa13.48□□□□□ -0.25
LINC01960-201ENST00000563759 ST20-AS1Q8NBB2 130 aa13.48□□□□□ -0.25
LINC01960-201ENST00000563759 TEX49A0A1B0GTD5 131 aa13.45□□□□□ -0.26
LINC01960-201ENST00000563759 SRRM2Q9UQ35 2752 aaKnown RBP13.44□□□□□ -0.26
LINC01960-201ENST00000563759 XGP55808 180 aa13.44□□□□□ -0.26
LINC01960-201ENST00000563759 LAMTOR3Q9UHA4 124 aa13.44□□□□□ -0.26
LINC01960-201ENST00000563759 A0A1B0GV72 72 aa13.43□□□□□ -0.26
LINC01960-201ENST00000563759 IGLV7-43P04211 117 aa13.43□□□□□ -0.26
LINC01960-201ENST00000563759 IGLV5-48A0A075B6I7 105 aa13.42□□□□□ -0.26
LINC01960-201ENST00000563759 ZNF861PO60384 105 aa13.42□□□□□ -0.26
LINC01960-201ENST00000563759 LINC01547P58512 204 aaPredicted RBP13.42□□□□□ -0.26
LINC01960-201ENST00000563759 PPDPFLQ8WWR9 84 aa13.42□□□□□ -0.26
LINC01960-201ENST00000563759 Q8N377 158 aa13.41□□□□□ -0.26
LINC01960-201ENST00000563759 APOBP04114 4563 aaKnown RBP13.38□□□□□ -0.27
LINC01960-201ENST00000563759 JMJD7-PLA2G4BH0Y9G9 81 aa13.38□□□□□ -0.27
LINC01960-201ENST00000563759 NDUFV3P56181 108 aaKnown RBP13.38□□□□□ -0.27
LINC01960-201ENST00000563759 GAGE2AQ6NT46 116 aa13.36□□□□□ -0.27
LINC01960-201ENST00000563759 C3orf22Q8N5N4 141 aa13.36□□□□□ -0.27
LINC01960-201ENST00000563759 VPS13BQ7Z7G8 4022 aa13.35□□□□□ -0.27
LINC01960-201ENST00000563759 OBSCN-AS1Q96MR7 158 aa13.35□□□□□ -0.27
LINC01960-201ENST00000563759 SMR3BP02814 79 aaPredicted RBP13.34□□□□□ -0.27
LINC01960-201ENST00000563759 C14orf132Q9NPU4 83 aa13.34□□□□□ -0.27
LINC01960-201ENST00000563759 ZNF706Q9Y5V0 76 aaPredicted RBP13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 1657.2 ms