RNA–Protein interactions for RNA: ENST00000563686.5

TCF4-218, Transcript of transcription factor 4, humanhuman

TSL 2

Gene TCF4, Length 6,012 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-218ENST00000563686 LINC00336Q6ZUF6 198 aa3.58□□□□□ -1.84
TCF4-218ENST00000563686 POLEQ07864 2286 aa3.58□□□□□ -1.84
TCF4-218ENST00000563686 PTPRQQ9UMZ3 2332 aa3.58□□□□□ -1.84
TCF4-218ENST00000563686 ANKHD1Q8IWZ3 2542 aaKnown RBP3.58□□□□□ -1.84
TCF4-218ENST00000563686 OXTP01178 125 aa3.57□□□□□ -1.84
TCF4-218ENST00000563686 SPACA4Q8TDM5 124 aa3.57□□□□□ -1.84
TCF4-218ENST00000563686 DMDP11532 3685 aa3.57□□□□□ -1.84
TCF4-218ENST00000563686 SPENQ96T58 3664 aaKnown RBP3.57□□□□□ -1.84
TCF4-218ENST00000563686 WNK2Q9Y3S1 2297 aa3.57□□□□□ -1.84
TCF4-218ENST00000563686 LCA10Q71F78 164 aa3.56□□□□□ -1.84
TCF4-218ENST00000563686 AKAP9Q99996 3911 aa3.56□□□□□ -1.84
TCF4-218ENST00000563686 BDP1A6H8Y1 2624 aa3.56□□□□□ -1.84
TCF4-218ENST00000563686 KRTAP4-16G5E9R7 235 aaPredicted RBP3.56□□□□□ -1.84
TCF4-218ENST00000563686 IGLV7-43P04211 117 aa3.56□□□□□ -1.84
TCF4-218ENST00000563686 FREM2Q5SZK8 3169 aa3.56□□□□□ -1.84
TCF4-218ENST00000563686 A0A1B0GU69 56 aa3.56□□□□□ -1.84
TCF4-218ENST00000563686 A8MUN3 132 aa3.56□□□□□ -1.84
TCF4-218ENST00000563686 TNP2Q05952 138 aa3.56□□□□□ -1.84
TCF4-218ENST00000563686 ABCA2Q9BZC7 2435 aa3.55□□□□□ -1.84
TCF4-218ENST00000563686 PSORS1C2Q9UIG4 136 aa3.55□□□□□ -1.84
TCF4-218ENST00000563686 CEP250Q9BV73 2442 aa3.55□□□□□ -1.84
TCF4-218ENST00000563686 ABCA1O95477 2261 aa3.55□□□□□ -1.84
TCF4-218ENST00000563686 SPRR1BP22528 89 aa3.55□□□□□ -1.84
TCF4-218ENST00000563686 KTN1-AS1Q86SY8 53 aa3.54□□□□□ -1.84
TCF4-218ENST00000563686 LAMA1P25391 3075 aa3.54□□□□□ -1.84
TCF4-218ENST00000563686 ROS1P08922 2347 aa3.54□□□□□ -1.84
TCF4-218ENST00000563686 IGKV2D-30A0A075B6S6 120 aa3.54□□□□□ -1.84
TCF4-218ENST00000563686 PLA2G1BP04054 148 aaKnown RBP3.54□□□□□ -1.84
TCF4-218ENST00000563686 IGKV2-30P06310 120 aa3.54□□□□□ -1.84
TCF4-218ENST00000563686 DOPEY2Q9Y3R5 2298 aa3.54□□□□□ -1.84
TCF4-218ENST00000563686 FP248Q71RG6 208 aaPredicted RBP3.54□□□□□ -1.84
TCF4-218ENST00000563686 TYMSOSQ8TAI1 123 aa3.54□□□□□ -1.84
TCF4-218ENST00000563686 MED13LQ71F56 2210 aa3.53□□□□□ -1.84
TCF4-218ENST00000563686 MMP24-AS1A0A0U1RRL7 71 aa3.53□□□□□ -1.84
TCF4-218ENST00000563686 FAM229AH3BQW9 127 aa3.53□□□□□ -1.84
TCF4-218ENST00000563686 PCNX1Q96RV3 2341 aa3.53□□□□□ -1.84
TCF4-218ENST00000563686 A0A0C4DFX4 3053 aa3.53□□□□□ -1.84
TCF4-218ENST00000563686 SSBP3-AS1Q7Z2R9 100 aa3.53□□□□□ -1.84
TCF4-218ENST00000563686 ANAPC11Q9NYG5 84 aa3.53□□□□□ -1.84
TCF4-218ENST00000563686 Q96NJ1 140 aa3.53□□□□□ -1.84
TCF4-218ENST00000563686 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.53□□□□□ -1.84
TCF4-218ENST00000563686 ASB16-AS1Q495Z4 193 aa3.52□□□□□ -1.85
TCF4-218ENST00000563686 LINC00483Q53H64 154 aa3.52□□□□□ -1.85
TCF4-218ENST00000563686 FAM208BQ5VWN6 2430 aa3.52□□□□□ -1.85
TCF4-218ENST00000563686 IGLV7-46A0A075B6I9 117 aa3.52□□□□□ -1.85
TCF4-218ENST00000563686 WDFY4Q6ZS81 3184 aa3.52□□□□□ -1.85
TCF4-218ENST00000563686 PLAC8Q9NZF1 115 aa3.51□□□□□ -1.85
TCF4-218ENST00000563686 LINC00472Q9H8W2 130 aa3.51□□□□□ -1.85
TCF4-218ENST00000563686 KRTAP1-5Q9BYS1 174 aa3.51□□□□□ -1.85
TCF4-218ENST00000563686 SPINK1P00995 79 aa3.51□□□□□ -1.85
TCF4-218ENST00000563686 NOTCH2Q04721 2471 aa3.51□□□□□ -1.85
TCF4-218ENST00000563686 Q75L30 129 aa3.5□□□□□ -1.85
TCF4-218ENST00000563686 ACACBO00763 2458 aa3.5□□□□□ -1.85
TCF4-218ENST00000563686 KRTAP7-1Q8IUC3 87 aa3.5□□□□□ -1.85
TCF4-218ENST00000563686 WWC2-AS2Q96NR7 200 aa3.5□□□□□ -1.85
TCF4-218ENST00000563686 SPTBN1Q01082 2364 aaKnown RBP3.49□□□□□ -1.85
TCF4-218ENST00000563686 CDC42SE1Q9NRR8 79 aa3.49□□□□□ -1.85
TCF4-218ENST00000563686 ANK3Q12955 4377 aaKnown RBP3.49□□□□□ -1.85
TCF4-218ENST00000563686 J3QL48 77 aa3.49□□□□□ -1.85
TCF4-218ENST00000563686 SPTAN1Q13813 2472 aaKnown RBP3.49□□□□□ -1.85
TCF4-218ENST00000563686 HIVEP2P31629 2446 aa3.48□□□□□ -1.85
TCF4-218ENST00000563686 NCOR2Q9Y618 2525 aa3.48□□□□□ -1.85
TCF4-218ENST00000563686 LCE6AA0A183 80 aa3.48□□□□□ -1.85
TCF4-218ENST00000563686 ASPMQ8IZT6 3477 aa3.48□□□□□ -1.85
TCF4-218ENST00000563686 UQCR11O14957 56 aa3.47□□□□□ -1.85
TCF4-218ENST00000563686 NBASA2RRP1 2371 aa3.47□□□□□ -1.85
TCF4-218ENST00000563686 ZCCHC13Q8WW36 166 aaKnown RBP3.47□□□□□ -1.85
TCF4-218ENST00000563686 LINC00304Q8N9R0 145 aa3.47□□□□□ -1.85
TCF4-218ENST00000563686 KRTAP29-1A8MX34 341 aaPredicted RBP3.46□□□□□ -1.86
TCF4-218ENST00000563686 TRIOO75962 3097 aa3.46□□□□□ -1.86
TCF4-218ENST00000563686 IGF2RP11717 2491 aa3.46□□□□□ -1.86
TCF4-218ENST00000563686 AKAP13Q12802 2813 aa3.46□□□□□ -1.86
TCF4-218ENST00000563686 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.45□□□□□ -1.86
TCF4-218ENST00000563686 LINC01558Q9Y6Z2 57 aa3.45□□□□□ -1.86
TCF4-218ENST00000563686 Q5VV11 94 aa3.45□□□□□ -1.86
TCF4-218ENST00000563686 SPEGQ15772 3267 aa3.45□□□□□ -1.86
TCF4-218ENST00000563686 SMG1Q96Q15 3661 aaKnown RBP3.45□□□□□ -1.86
TCF4-218ENST00000563686 ATRXP46100 2492 aa3.45□□□□□ -1.86
TCF4-218ENST00000563686 ZFHX4Q86UP3 3567 aa3.45□□□□□ -1.86
TCF4-218ENST00000563686 MIR22HGQ0VDD5 57 aa3.44□□□□□ -1.86
TCF4-218ENST00000563686 Q6ZR54 194 aa3.44□□□□□ -1.86
TCF4-218ENST00000563686 Q8N9P0 234 aaPredicted RBP3.44□□□□□ -1.86
TCF4-218ENST00000563686 KRTAP11-1Q8IUC1 163 aa3.44□□□□□ -1.86
TCF4-218ENST00000563686 HRES1P13985 223 aa3.43□□□□□ -1.86
TCF4-218ENST00000563686 MUC3AQ02505 3323 aa3.43□□□□□ -1.86
TCF4-218ENST00000563686 VPS13AQ96RL7 3174 aa3.43□□□□□ -1.86
TCF4-218ENST00000563686 CHD8Q9HCK8 2581 aa3.43□□□□□ -1.86
TCF4-218ENST00000563686 AKAP6Q13023 2319 aa3.43□□□□□ -1.86
TCF4-218ENST00000563686 ZZEF1O43149 2961 aa3.42□□□□□ -1.86
TCF4-218ENST00000563686 CACNA1AO00555 2505 aa3.42□□□□□ -1.86
TCF4-218ENST00000563686 PTPN13Q12923 2485 aa3.42□□□□□ -1.86
TCF4-218ENST00000563686 A0A087X002 238 aa3.42□□□□□ -1.86
TCF4-218ENST00000563686 C9orf92A6NGG3 77 aa3.42□□□□□ -1.86
TCF4-218ENST00000563686 PANO1I0J062 215 aa3.42□□□□□ -1.86
TCF4-218ENST00000563686 PIEZO2Q9H5I5 2752 aa3.41□□□□□ -1.86
TCF4-218ENST00000563686 CFAP54Q96N23 3096 aa3.41□□□□□ -1.86
TCF4-218ENST00000563686 Q5W150 140 aa3.41□□□□□ -1.86
TCF4-218ENST00000563686 KRTAP13-1Q8IUC0 172 aa3.41□□□□□ -1.86
TCF4-218ENST00000563686 Q6ZRN7 208 aaPredicted RBP3.4□□□□□ -1.86
TCF4-218ENST00000563686 CELSR3Q9NYQ7 3312 aa3.4□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms