RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 FAM19A1Q7Z5A9 133 aa5.09□□□□□ -1.59
UBR1-204ENST00000563239 PRYO14603 147 aa5.08□□□□□ -1.6
UBR1-204ENST00000563239 IGLV6-57P01721 117 aa5.08□□□□□ -1.6
UBR1-204ENST00000563239 AKR1D1P51857 326 aa5.08□□□□□ -1.6
UBR1-204ENST00000563239 SPANXB1Q9NS25 103 aaPredicted RBP5.08□□□□□ -1.6
UBR1-204ENST00000563239 DDTP30046 118 aa5.07□□□□□ -1.6
UBR1-204ENST00000563239 LINC00337Q8N6G1 96 aa5.07□□□□□ -1.6
UBR1-204ENST00000563239 MIEN1Q9BRT3 115 aa5.07□□□□□ -1.6
UBR1-204ENST00000563239 SPANXDQ9BXN6 97 aa5.07□□□□□ -1.6
UBR1-204ENST00000563239 SPANXCQ9NY87 97 aa5.07□□□□□ -1.6
UBR1-204ENST00000563239 ANAPC11Q9NYG5 84 aa5.07□□□□□ -1.6
UBR1-204ENST00000563239 A0A087X002 238 aa5.06□□□□□ -1.6
UBR1-204ENST00000563239 B5MCH6 92 aa5.05□□□□□ -1.6
UBR1-204ENST00000563239 SCGB1D1O95968 90 aa5.05□□□□□ -1.6
UBR1-204ENST00000563239 SCGB1D4Q6XE38 83 aa5.05□□□□□ -1.6
UBR1-204ENST00000563239 KRTAP13-2Q52LG2 175 aa5.04□□□□□ -1.6
UBR1-204ENST00000563239 SMCR5Q8TEV8 140 aa5.04□□□□□ -1.6
UBR1-204ENST00000563239 HIGD2AQ9BW72 106 aa5.04□□□□□ -1.6
UBR1-204ENST00000563239 PPDPFQ9H3Y8 114 aa5.04□□□□□ -1.6
UBR1-204ENST00000563239 TRAV23DV6A0A075B6W5 121 aa5.03□□□□□ -1.6
UBR1-204ENST00000563239 ETDCA0A1B0GVM5 59 aa5.03□□□□□ -1.6
UBR1-204ENST00000563239 ERC2-IT1O76042 136 aa5.03□□□□□ -1.6
UBR1-204ENST00000563239 FAM229BQ4G0N7 80 aa5.03□□□□□ -1.6
UBR1-204ENST00000563239 S100A7L2Q5SY68 101 aa5.03□□□□□ -1.6
UBR1-204ENST00000563239 MUSTN1Q8IVN3 82 aa5.03□□□□□ -1.6
UBR1-204ENST00000563239 Q9BRP9 147 aa5.03□□□□□ -1.6
UBR1-204ENST00000563239 HSBP1L1C9JCN9 74 aa5.02□□□□□ -1.61
UBR1-204ENST00000563239 CRYGAP11844 174 aa5.02□□□□□ -1.61
UBR1-204ENST00000563239 IFITM1P13164 125 aa5.02□□□□□ -1.61
UBR1-204ENST00000563239 RPL13AP40429 203 aaKnown RBP5.02□□□□□ -1.61
UBR1-204ENST00000563239 Q6ZVH6 145 aa5.02□□□□□ -1.61
UBR1-204ENST00000563239 SPRR4Q96PI1 79 aa5.02□□□□□ -1.61
UBR1-204ENST00000563239 ZNF73O43830 326 aaPredicted RBP5.01□□□□□ -1.61
UBR1-204ENST00000563239 LRP2P98164 4655 aa5.01□□□□□ -1.61
UBR1-204ENST00000563239 JOSD1Q15040 202 aaPredicted RBP5.01□□□□□ -1.61
UBR1-204ENST00000563239 Q6ZRX8 168 aa5.01□□□□□ -1.61
UBR1-204ENST00000563239 COX8AP10176 69 aa5□□□□□ -1.61
UBR1-204ENST00000563239 S100A12P80511 92 aa5□□□□□ -1.61
UBR1-204ENST00000563239 LINC00518Q8N0U6 118 aa5□□□□□ -1.61
UBR1-204ENST00000563239 OR13C6PQ8NH95 151 aa5□□□□□ -1.61
UBR1-204ENST00000563239 DLEU1O43261 78 aa4.99□□□□□ -1.61
UBR1-204ENST00000563239 LINC00483Q53H64 154 aa4.99□□□□□ -1.61
UBR1-204ENST00000563239 C3orf22Q8N5N4 141 aa4.99□□□□□ -1.61
UBR1-204ENST00000563239 TYMSOSQ8TAI1 123 aa4.99□□□□□ -1.61
UBR1-204ENST00000563239 COPS9Q8WXC6 57 aa4.99□□□□□ -1.61
UBR1-204ENST00000563239 SPATA45Q537H7 98 aa4.98□□□□□ -1.61
UBR1-204ENST00000563239 PYY3Q5JQD4 70 aa4.98□□□□□ -1.61
UBR1-204ENST00000563239 C14orf144Q96I85 54 aa4.98□□□□□ -1.61
UBR1-204ENST00000563239 PAM16Q9Y3D7 125 aa4.98□□□□□ -1.61
UBR1-204ENST00000563239 FAT4Q6V0I7 4981 aa4.97□□□□□ -1.61
UBR1-204ENST00000563239 C6orf99Q4VX62 202 aa4.97□□□□□ -1.61
UBR1-204ENST00000563239 ST20-AS1Q8NBB2 130 aa4.97□□□□□ -1.61
UBR1-204ENST00000563239 CBY1Q9Y3M2 126 aa4.97□□□□□ -1.61
UBR1-204ENST00000563239 ZNF706Q9Y5V0 76 aaPredicted RBP4.97□□□□□ -1.61
UBR1-204ENST00000563239 LPAP08519 4548 aa4.97□□□□□ -1.61
UBR1-204ENST00000563239 A4D1N5 150 aa4.96□□□□□ -1.62
UBR1-204ENST00000563239 A6NDN8 102 aa4.96□□□□□ -1.62
UBR1-204ENST00000563239 ELOF1P60002 83 aaKnown RBP4.96□□□□□ -1.62
UBR1-204ENST00000563239 GAGE2AQ6NT46 116 aa4.96□□□□□ -1.62
UBR1-204ENST00000563239 C2orf91Q6ZV80 131 aa4.96□□□□□ -1.62
UBR1-204ENST00000563239 VAMP8Q9BV40 100 aa4.96□□□□□ -1.62
UBR1-204ENST00000563239 TRAV13-2A0A0B4J235 113 aa4.95□□□□□ -1.62
UBR1-204ENST00000563239 TRBV7-6A0A0J9YX20 115 aa4.95□□□□□ -1.62
UBR1-204ENST00000563239 TSPAN13O95857 204 aa4.95□□□□□ -1.62
UBR1-204ENST00000563239 COX7BP24311 80 aa4.95□□□□□ -1.62
UBR1-204ENST00000563239 SMIM11BQ8TCY0 68 aa4.95□□□□□ -1.62
UBR1-204ENST00000563239 HIGD1BQ9P298 99 aa4.95□□□□□ -1.62
UBR1-204ENST00000563239 HINT1P49773 126 aaPredicted RBP4.94□□□□□ -1.62
UBR1-204ENST00000563239 LINC00304Q8N9R0 145 aa4.94□□□□□ -1.62
UBR1-204ENST00000563239 HIST1H4GQ99525 98 aa4.94□□□□□ -1.62
UBR1-204ENST00000563239 SPRR1BP22528 89 aa4.93□□□□□ -1.62
UBR1-204ENST00000563239 SLC25A34Q6PIV7 304 aa4.93□□□□□ -1.62
UBR1-204ENST00000563239 DHRS4-AS1Q9P1J3 65 aa4.93□□□□□ -1.62
UBR1-204ENST00000563239 Q8NBF4 154 aa4.92□□□□□ -1.62
UBR1-204ENST00000563239 C12orf57Q99622 126 aa4.92□□□□□ -1.62
UBR1-204ENST00000563239 FSIP2Q5CZC0 6907 aa4.92□□□□□ -1.62
UBR1-204ENST00000563239 A0A1B0GWB2 263 aa4.91□□□□□ -1.62
UBR1-204ENST00000563239 CFC1BP0CG36 223 aa4.91□□□□□ -1.62
UBR1-204ENST00000563239 CFC1P0CG37 223 aa4.91□□□□□ -1.62
UBR1-204ENST00000563239 LINC01547P58512 204 aaPredicted RBP4.91□□□□□ -1.62
UBR1-204ENST00000563239 IGLV9-49A0A0B4J1Y8 123 aa4.9□□□□□ -1.63
UBR1-204ENST00000563239 CTAG1AP78358 180 aa4.9□□□□□ -1.63
UBR1-204ENST00000563239 MOBPQ13875 183 aa4.9□□□□□ -1.63
UBR1-204ENST00000563239 PRR4Q16378 134 aa4.89□□□□□ -1.63
UBR1-204ENST00000563239 SPAG11AQ6PDA7 123 aa4.89□□□□□ -1.63
UBR1-204ENST00000563239 SSBP3-AS1Q7Z2R9 100 aa4.89□□□□□ -1.63
UBR1-204ENST00000563239 SMIM29Q86T20 159 aa4.89□□□□□ -1.63
UBR1-204ENST00000563239 IGLV5-48A0A075B6I7 105 aa4.88□□□□□ -1.63
UBR1-204ENST00000563239 TAL2Q16559 108 aa4.88□□□□□ -1.63
UBR1-204ENST00000563239 LINC00575Q6W349 94 aa4.88□□□□□ -1.63
UBR1-204ENST00000563239 CEND1Q8N111 149 aa4.88□□□□□ -1.63
UBR1-204ENST00000563239 RETNLBQ9BQ08 111 aa4.88□□□□□ -1.63
UBR1-204ENST00000563239 A0A0B4J2C4 111 aa4.87□□□□□ -1.63
UBR1-204ENST00000563239 FXYD2P54710 66 aa4.87□□□□□ -1.63
UBR1-204ENST00000563239 DEFB105AQ8NG35 78 aa4.87□□□□□ -1.63
UBR1-204ENST00000563239 TEX49A0A1B0GTD5 131 aa4.86□□□□□ -1.63
UBR1-204ENST00000563239 SPINK1P00995 79 aa4.86□□□□□ -1.63
UBR1-204ENST00000563239 VAMP3Q15836 100 aa4.86□□□□□ -1.63
UBR1-204ENST00000563239 Q8N377 158 aa4.86□□□□□ -1.63
UBR1-204ENST00000563239 H7C2G1 150 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms