RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 TTTY10Q9BZA0 68 aa1.54□□□□□ -2.16
SMG1-204ENST00000561940 TRAV12-2A0A075B6T6 113 aa1.53□□□□□ -2.16
SMG1-204ENST00000561940 BBIP1A8MTZ0 92 aa1.53□□□□□ -2.16
SMG1-204ENST00000561940 FXYD1O00168 92 aa1.53□□□□□ -2.16
SMG1-204ENST00000561940 SPINK4O60575 86 aa1.53□□□□□ -2.16
SMG1-204ENST00000561940 DPM2O94777 84 aa1.53□□□□□ -2.16
SMG1-204ENST00000561940 UBE2D1P51668 147 aa1.53□□□□□ -2.16
SMG1-204ENST00000561940 DEFB1P60022 68 aa1.53□□□□□ -2.16
SMG1-204ENST00000561940 PPP3R1P63098 170 aa1.53□□□□□ -2.16
SMG1-204ENST00000561940 NEDD8Q15843 81 aa1.53□□□□□ -2.16
SMG1-204ENST00000561940 LINC00575Q6W349 94 aa1.53□□□□□ -2.16
SMG1-204ENST00000561940 LINC00474Q9P2X8 69 aa1.53□□□□□ -2.16
SMG1-204ENST00000561940 TRGV1A0A0A0MS02 117 aa1.52□□□□□ -2.17
SMG1-204ENST00000561940 A0A1B0GX51 115 aa1.52□□□□□ -2.17
SMG1-204ENST00000561940 CORTO00230 105 aa1.52□□□□□ -2.17
SMG1-204ENST00000561940 C6orf201Q7Z4U5 140 aa1.52□□□□□ -2.17
SMG1-204ENST00000561940 BANF2Q9H503 90 aa1.52□□□□□ -2.17
SMG1-204ENST00000561940 GNG8Q9UK08 70 aa1.52□□□□□ -2.17
SMG1-204ENST00000561940 A0A087WWC5 75 aa1.51□□□□□ -2.17
SMG1-204ENST00000561940 BORCS7-ASMTA0A0B4J1R7 106 aa1.51□□□□□ -2.17
SMG1-204ENST00000561940 UQCRQO14949 82 aa1.51□□□□□ -2.17
SMG1-204ENST00000561940 SNAPC5O75971 98 aa1.51□□□□□ -2.17
SMG1-204ENST00000561940 HBDP02042 147 aa1.51□□□□□ -2.17
SMG1-204ENST00000561940 SCGB1A1P11684 91 aa1.51□□□□□ -2.17
SMG1-204ENST00000561940 IZUMO2Q6UXV1 221 aa1.51□□□□□ -2.17
SMG1-204ENST00000561940 TSC22D3Q99576 134 aa1.51□□□□□ -2.17
SMG1-204ENST00000561940 IFITM5A6NNB3 132 aa1.5□□□□□ -2.17
SMG1-204ENST00000561940 SLC25A4P12235 298 aa1.5□□□□□ -2.17
SMG1-204ENST00000561940 SNCAP37840 140 aa1.5□□□□□ -2.17
SMG1-204ENST00000561940 ARPC4P59998 168 aa1.5□□□□□ -2.17
SMG1-204ENST00000561940 C5orf17Q8NAS9 161 aa1.5□□□□□ -2.17
SMG1-204ENST00000561940 BATF3Q9NR55 127 aa1.5□□□□□ -2.17
SMG1-204ENST00000561940 GPR98Q8WXG9 6306 aa1.5□□□□□ -2.17
SMG1-204ENST00000561940 LOC107984156A0A0G2JMH3 177 aa1.49□□□□□ -2.17
SMG1-204ENST00000561940 A0A1W2PPM0 123 aa1.49□□□□□ -2.17
SMG1-204ENST00000561940 IGLC1P0CG04 106 aa1.49□□□□□ -2.17
SMG1-204ENST00000561940 QRFPP83859 136 aa1.49□□□□□ -2.17
SMG1-204ENST00000561940 HIST1H1AQ02539 215 aaPredicted RBP1.49□□□□□ -2.17
SMG1-204ENST00000561940 SPINK9Q5DT21 86 aa1.49□□□□□ -2.17
SMG1-204ENST00000561940 ARL17AQ8IVW1 177 aa1.49□□□□□ -2.17
SMG1-204ENST00000561940 MUC17Q685J3 4493 aa1.48□□□□□ -2.17
SMG1-204ENST00000561940 PNMA8CA0A1B0GUJ8 204 aa1.48□□□□□ -2.17
SMG1-204ENST00000561940 SNRPGP15A8MWD9 76 aa1.48□□□□□ -2.17
SMG1-204ENST00000561940 J3QLW9 94 aa1.48□□□□□ -2.17
SMG1-204ENST00000561940 GTF2A1P52655 376 aaPredicted RBP1.48□□□□□ -2.17
SMG1-204ENST00000561940 COX6A2Q02221 97 aa1.48□□□□□ -2.17
SMG1-204ENST00000561940 CATR1Q13166 79 aa1.48□□□□□ -2.17
SMG1-204ENST00000561940 WHAMMP3Q1A5X7 153 aa1.48□□□□□ -2.17
SMG1-204ENST00000561940 CCDC58Q4VC31 144 aa1.48□□□□□ -2.17
SMG1-204ENST00000561940 OCIAD2Q56VL3 154 aa1.48□□□□□ -2.17
SMG1-204ENST00000561940 TCTE3Q8IZS6 198 aa1.48□□□□□ -2.17
SMG1-204ENST00000561940 ACBD7Q8N6N7 88 aa1.48□□□□□ -2.17
SMG1-204ENST00000561940 SMIM7Q9BQ49 75 aa1.48□□□□□ -2.17
SMG1-204ENST00000561940 TAS2R8Q9NYW2 309 aa1.48□□□□□ -2.17
SMG1-204ENST00000561940 TRAV12-3A0A0B4J271 114 aa1.47□□□□□ -2.17
SMG1-204ENST00000561940 CFDP00746 253 aaPredicted RBP1.47□□□□□ -2.17
SMG1-204ENST00000561940 SLC25A5P05141 298 aaKnown RBP1.47□□□□□ -2.17
SMG1-204ENST00000561940 NMBP08949 121 aa1.47□□□□□ -2.17
SMG1-204ENST00000561940 SFTA3P0C7M3 94 aa1.47□□□□□ -2.17
SMG1-204ENST00000561940 CKS2P33552 79 aa1.47□□□□□ -2.17
SMG1-204ENST00000561940 ENHOQ6UWT2 76 aa1.47□□□□□ -2.17
SMG1-204ENST00000561940 COX6B2Q6YFQ2 88 aa1.47□□□□□ -2.17
SMG1-204ENST00000561940 TSKUQ8WUA8 353 aa1.47□□□□□ -2.17
SMG1-204ENST00000561940 ARHGAP5-AS1Q96IT6 56 aa1.47□□□□□ -2.17
SMG1-204ENST00000561940 MRPL36Q9P0J6 103 aaKnown RBP1.47□□□□□ -2.17
SMG1-204ENST00000561940 CRYM-AS1A6NIL9 109 aa1.46□□□□□ -2.18
SMG1-204ENST00000561940 EDF1O60869 148 aaKnown RBP1.46□□□□□ -2.18
SMG1-204ENST00000561940 PDE6GP18545 87 aa1.46□□□□□ -2.18
SMG1-204ENST00000561940 RHOHQ15669 191 aa1.46□□□□□ -2.18
SMG1-204ENST00000561940 HSD17B12Q53GQ0 312 aa1.46□□□□□ -2.18
SMG1-204ENST00000561940 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.46□□□□□ -2.18
SMG1-204ENST00000561940 PKIAP61925 76 aa1.45□□□□□ -2.18
SMG1-204ENST00000561940 C12orf73Q69YU5 71 aa1.45□□□□□ -2.18
SMG1-204ENST00000561940 LIMD2Q9BT23 127 aa1.45□□□□□ -2.18
SMG1-204ENST00000561940 LPAR5Q9H1C0 372 aa1.45□□□□□ -2.18
SMG1-204ENST00000561940 SAR1AQ9NR31 198 aa1.45□□□□□ -2.18
SMG1-204ENST00000561940 A0A096LNI7 61 aa1.44□□□□□ -2.18
SMG1-204ENST00000561940 C9JAW5 83 aa1.44□□□□□ -2.18
SMG1-204ENST00000561940 M0R2P5 195 aa1.44□□□□□ -2.18
SMG1-204ENST00000561940 GNGT2O14610 69 aa1.44□□□□□ -2.18
SMG1-204ENST00000561940 TCRAP04437 139 aa1.44□□□□□ -2.18
SMG1-204ENST00000561940 FXYD4P59646 89 aa1.44□□□□□ -2.18
SMG1-204ENST00000561940 SPAG11AQ6PDA7 123 aa1.44□□□□□ -2.18
SMG1-204ENST00000561940 HIGD1AQ9Y241 93 aa1.44□□□□□ -2.18
SMG1-204ENST00000561940 MUC12Q9UKN1 5478 aa1.44□□□□□ -2.18
SMG1-204ENST00000561940 IGHV1-24A0A0C4DH33 117 aa1.43□□□□□ -2.18
SMG1-204ENST00000561940 TMEM262E9PQX1 116 aa1.43□□□□□ -2.18
SMG1-204ENST00000561940 CACFD1Q9UGQ2 172 aa1.43□□□□□ -2.18
SMG1-204ENST00000561940 A0A0G2JND7 137 aa1.42□□□□□ -2.18
SMG1-204ENST00000561940 A6NN06 94 aa1.42□□□□□ -2.18
SMG1-204ENST00000561940 ZNF727A8MUV8 499 aa1.42□□□□□ -2.18
SMG1-204ENST00000561940 M0R129 80 aa1.42□□□□□ -2.18
SMG1-204ENST00000561940 LINC00694P0DN24 101 aa1.42□□□□□ -2.18
SMG1-204ENST00000561940 COX4I1P13073 169 aa1.42□□□□□ -2.18
SMG1-204ENST00000561940 RPS25P62851 125 aaKnown RBP1.42□□□□□ -2.18
SMG1-204ENST00000561940 Q6ZQY7 126 aa1.42□□□□□ -2.18
SMG1-204ENST00000561940 MAFIPQ8WZ33 124 aa1.42□□□□□ -2.18
SMG1-204ENST00000561940 TRGV9Q99603 122 aa1.42□□□□□ -2.18
SMG1-204ENST00000561940 PDCD10Q9BUL8 212 aa1.42□□□□□ -2.18
SMG1-204ENST00000561940 TRBV30A0A0K0K1B3 111 aa1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms