RNA–Protein interactions for RNA: ENST00000561305.1

CASC4-211, Transcript of cancer susceptibility 4, humanhuman

TSL 5

Gene CASC4, Length 353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-211ENST00000561305 GSKIPQ9P0R6 139 aa-2.8□□□□□ -2.86
CASC4-211ENST00000561305 CUL7Q14999 1698 aa-2.8□□□□□ -2.86
CASC4-211ENST00000561305 PHLPP1O60346 1717 aa-2.81□□□□□ -2.86
CASC4-211ENST00000561305 QSER1Q2KHR3 1735 aa-2.81□□□□□ -2.86
CASC4-211ENST00000561305 PBRM1Q86U86 1689 aa-2.81□□□□□ -2.86
CASC4-211ENST00000561305 USP32Q8NFA0 1604 aa-2.81□□□□□ -2.86
CASC4-211ENST00000561305 CEP170BQ9Y4F5 1589 aaPredicted RBP-2.81□□□□□ -2.86
CASC4-211ENST00000561305 LINC00158P58513 81 aa-2.81□□□□□ -2.86
CASC4-211ENST00000561305 C12orf57Q99622 126 aa-2.81□□□□□ -2.86
CASC4-211ENST00000561305 PRO3102Q9H379 93 aa-2.81□□□□□ -2.86
CASC4-211ENST00000561305 KIF20BQ96Q89 1820 aa-2.82□□□□□ -2.86
CASC4-211ENST00000561305 TOPAZ1Q8N9V7 1692 aa-2.82□□□□□ -2.86
CASC4-211ENST00000561305 FYCO1Q9BQS8 1478 aa-2.82□□□□□ -2.86
CASC4-211ENST00000561305 C7orf77A4D0Y5 90 aa-2.82□□□□□ -2.86
CASC4-211ENST00000561305 GNG10P50151 68 aa-2.82□□□□□ -2.86
CASC4-211ENST00000561305 C8orf59Q8N0T1 100 aaPredicted RBP-2.82□□□□□ -2.86
CASC4-211ENST00000561305 PRO1854Q9UHT4 67 aa-2.82□□□□□ -2.86
CASC4-211ENST00000561305 AP4S1Q9Y587 144 aa-2.82□□□□□ -2.86
CASC4-211ENST00000561305 WIZO95785 1651 aa-2.82□□□□□ -2.86
CASC4-211ENST00000561305 COPZ1P61923 177 aa-2.83□□□□□ -2.86
CASC4-211ENST00000561305 MON2Q7Z3U7 1717 aa-2.83□□□□□ -2.86
CASC4-211ENST00000561305 GNG11P61952 73 aa-2.84□□□□□ -2.86
CASC4-211ENST00000561305 VAMP8Q9BV40 100 aa-2.84□□□□□ -2.86
CASC4-211ENST00000561305 MAGI3Q5TCQ9 1506 aa-2.84□□□□□ -2.86
CASC4-211ENST00000561305 FREM2Q5SZK8 3169 aa-2.84□□□□□ -2.86
CASC4-211ENST00000561305 GRIN2AQ12879 1464 aa-2.84□□□□□ -2.86
CASC4-211ENST00000561305 LRRC9Q6ZRR7 1453 aa-2.84□□□□□ -2.86
CASC4-211ENST00000561305 C5P01031 1676 aa-2.85□□□□□ -2.87
CASC4-211ENST00000561305 DEPDC5O75140 1603 aa-2.85□□□□□ -2.87
CASC4-211ENST00000561305 MIF4GDA9UHW6 222 aaKnown RBP-2.85□□□□□ -2.87
CASC4-211ENST00000561305 RGPD3A6NKT7 1758 aaPredicted RBP-2.86□□□□□ -2.87
CASC4-211ENST00000561305 RGPD4Q7Z3J3 1758 aa-2.86□□□□□ -2.87
CASC4-211ENST00000561305 RPS25P62851 125 aaKnown RBP-2.86□□□□□ -2.87
CASC4-211ENST00000561305 RPL38P63173 70 aaKnown RBP-2.86□□□□□ -2.87
CASC4-211ENST00000561305 WFDC9Q8NEX5 89 aa-2.86□□□□□ -2.87
CASC4-211ENST00000561305 ROBO1Q9Y6N7 1651 aa-2.86□□□□□ -2.87
CASC4-211ENST00000561305 NBEAP1P0C6P0 100 aa-2.87□□□□□ -2.87
CASC4-211ENST00000561305 COX7BP24311 80 aa-2.87□□□□□ -2.87
CASC4-211ENST00000561305 FAM135AQ9P2D6 1515 aa-2.88□□□□□ -2.87
CASC4-211ENST00000561305 ZNF831Q5JPB2 1677 aa-2.88□□□□□ -2.87
CASC4-211ENST00000561305 PRUNE2Q8WUY3 3088 aa-2.88□□□□□ -2.87
CASC4-211ENST00000561305 DEFB130BP0DP73 79 aa-2.88□□□□□ -2.87
CASC4-211ENST00000561305 DEFB130AP0DP74 79 aa-2.88□□□□□ -2.87
CASC4-211ENST00000561305 CATR1Q13166 79 aa-2.88□□□□□ -2.87
CASC4-211ENST00000561305 KRTAP19-6Q3LI70 58 aa-2.88□□□□□ -2.87
CASC4-211ENST00000561305 UBR3Q6ZT12 1888 aa-2.88□□□□□ -2.87
CASC4-211ENST00000561305 ATP7BP35670 1465 aa-2.89□□□□□ -2.87
CASC4-211ENST00000561305 K7EP13 123 aa-2.89□□□□□ -2.87
CASC4-211ENST00000561305 SERP2Q8N6R1 65 aa-2.89□□□□□ -2.87
CASC4-211ENST00000561305 TSTD1Q8NFU3 115 aa-2.89□□□□□ -2.87
CASC4-211ENST00000561305 LYNX1G3V0Z9 82 aa-2.9□□□□□ -2.87
CASC4-211ENST00000561305 DEFB4AO15263 64 aa-2.9□□□□□ -2.87
CASC4-211ENST00000561305 SCAPERQ9BY12 1400 aa-2.91□□□□□ -2.87
CASC4-211ENST00000561305 NAP1L6A6NFF2 107 aa-2.91□□□□□ -2.88
CASC4-211ENST00000561305 TMEM262E9PQX1 116 aa-2.91□□□□□ -2.88
CASC4-211ENST00000561305 APOC2P02655 101 aa-2.91□□□□□ -2.88
CASC4-211ENST00000561305 FABP1P07148 127 aa-2.91□□□□□ -2.88
CASC4-211ENST00000561305 IGLC2P0DOY2 106 aa-2.91□□□□□ -2.88
CASC4-211ENST00000561305 IGLC3P0DOY3 106 aa-2.91□□□□□ -2.88
CASC4-211ENST00000561305 IAPPP10997 89 aa-2.91□□□□□ -2.88
CASC4-211ENST00000561305 CKS1BP61024 79 aa-2.91□□□□□ -2.88
CASC4-211ENST00000561305 SMIM15Q7Z3B0 74 aa-2.91□□□□□ -2.88
CASC4-211ENST00000561305 C1orf54Q8WWF1 131 aa-2.91□□□□□ -2.88
CASC4-211ENST00000561305 ANP32BQ92688 251 aaKnown RBP-2.91□□□□□ -2.88
CASC4-211ENST00000561305 TIMM8BQ9Y5J9 83 aaPredicted RBP-2.91□□□□□ -2.88
CASC4-211ENST00000561305 ATP5EP56381 51 aaPredicted RBP-2.92□□□□□ -2.88
CASC4-211ENST00000561305 DR1Q01658 176 aa-2.92□□□□□ -2.88
CASC4-211ENST00000561305 PFDN5Q99471 154 aa-2.92□□□□□ -2.88
CASC4-211ENST00000561305 CGREF1Q99674 301 aa-2.92□□□□□ -2.88
CASC4-211ENST00000561305 ANKRD36CQ5JPF3 1778 aa-2.92□□□□□ -2.88
CASC4-211ENST00000561305 IGLV5-48A0A075B6I7 105 aa-2.93□□□□□ -2.88
CASC4-211ENST00000561305 F8WEM9 126 aa-2.93□□□□□ -2.88
CASC4-211ENST00000561305 ASIPP42127 132 aa-2.93□□□□□ -2.88
CASC4-211ENST00000561305 TOGARAM1Q9Y4F4 1720 aa-2.93□□□□□ -2.88
CASC4-211ENST00000561305 ZFHX4Q86UP3 3567 aa-2.94□□□□□ -2.88
CASC4-211ENST00000561305 CRYM-AS1A6NIL9 109 aa-2.94□□□□□ -2.88
CASC4-211ENST00000561305 DPH3P1Q9H4G8 78 aa-2.94□□□□□ -2.88
CASC4-211ENST00000561305 CRYBG1Q9Y4K1 1723 aa-2.94□□□□□ -2.88
CASC4-211ENST00000561305 OOSP1A8MZH6 123 aa-2.95□□□□□ -2.88
CASC4-211ENST00000561305 IFI6P09912 130 aa-2.95□□□□□ -2.88
CASC4-211ENST00000561305 MEIG1Q5JSS6 88 aa-2.95□□□□□ -2.88
CASC4-211ENST00000561305 CDC26Q8NHZ8 85 aa-2.95□□□□□ -2.88
CASC4-211ENST00000561305 PKD1L3Q7Z443 1732 aa-2.96□□□□□ -2.88
CASC4-211ENST00000561305 NESP48681 1621 aa-2.96□□□□□ -2.88
CASC4-211ENST00000561305 LINC01546A6NGU7 62 aa-2.97□□□□□ -2.88
CASC4-211ENST00000561305 ARPC4P59998 168 aa-2.97□□□□□ -2.88
CASC4-211ENST00000561305 CRYBG3Q68DQ2 2970 aa-2.97□□□□□ -2.89
CASC4-211ENST00000561305 PRDM15P57071 1507 aaPredicted RBP-2.98□□□□□ -2.89
CASC4-211ENST00000561305 ABCC2Q92887 1545 aa-2.98□□□□□ -2.89
CASC4-211ENST00000561305 TRBV25-1A0A075B6N4 114 aa-2.98□□□□□ -2.89
CASC4-211ENST00000561305 PMCHL1Q16048 86 aa-2.98□□□□□ -2.89
CASC4-211ENST00000561305 TRGV9Q99603 122 aa-2.98□□□□□ -2.89
CASC4-211ENST00000561305 LRRC7Q96NW7 1537 aa-2.98□□□□□ -2.89
CASC4-211ENST00000561305 GNG14A0A1W2PPG7 69 aa-2.99□□□□□ -2.89
CASC4-211ENST00000561305 KTN1Q86UP2 1357 aaKnown RBP-3□□□□□ -2.89
CASC4-211ENST00000561305 CACFD1Q9UGQ2 172 aa-3□□□□□ -2.89
CASC4-211ENST00000561305 PARP4Q9UKK3 1724 aaKnown RBP-3□□□□□ -2.89
CASC4-211ENST00000561305 NWD1Q149M9 1564 aa-3□□□□□ -2.89
CASC4-211ENST00000561305 TEX14Q8IWB6 1497 aa-3.01□□□□□ -2.89
CASC4-211ENST00000561305 TMEM218A2RU14 115 aa-3.01□□□□□ -2.89
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms