RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 COL5A1-AS1Q5SY13 56 aa6.49□□□□□ -1.37
TPM1-221ENST00000559831 REG3GQ6UW15 175 aa6.49□□□□□ -1.37
TPM1-221ENST00000559831 NAA38Q9BRA0 125 aaKnown RBP6.49□□□□□ -1.37
TPM1-221ENST00000559831 KCNQ1DNQ9H478 68 aa6.49□□□□□ -1.37
TPM1-221ENST00000559831 ZNF73O43830 326 aaPredicted RBP6.48□□□□□ -1.37
TPM1-221ENST00000559831 SMR3BP02814 79 aaPredicted RBP6.48□□□□□ -1.37
TPM1-221ENST00000559831 PSMB2P49721 201 aa6.48□□□□□ -1.37
TPM1-221ENST00000559831 DIRC1Q969H9 104 aa6.48□□□□□ -1.37
TPM1-221ENST00000559831 ETDCA0A1B0GVM5 59 aa6.47□□□□□ -1.37
TPM1-221ENST00000559831 TAX1BP3O14907 124 aa6.47□□□□□ -1.37
TPM1-221ENST00000559831 C6orf99Q4VX62 202 aa6.47□□□□□ -1.37
TPM1-221ENST00000559831 C1orf137Q5JT78 98 aa6.47□□□□□ -1.37
TPM1-221ENST00000559831 PSORS1C2Q9UIG4 136 aa6.47□□□□□ -1.37
TPM1-221ENST00000559831 TRIAP1O43715 76 aa6.46□□□□□ -1.38
TPM1-221ENST00000559831 CDK2AP2O75956 126 aa6.46□□□□□ -1.38
TPM1-221ENST00000559831 RPL28P46779 137 aaKnown RBP6.46□□□□□ -1.38
TPM1-221ENST00000559831 FAM19A1Q7Z5A9 133 aa6.46□□□□□ -1.38
TPM1-221ENST00000559831 LINC00528Q8N1L1 170 aa6.46□□□□□ -1.38
TPM1-221ENST00000559831 C9orf118A6NHY6 69 aa6.45□□□□□ -1.38
TPM1-221ENST00000559831 H3BUT2 72 aa6.45□□□□□ -1.38
TPM1-221ENST00000559831 BCE1O60756 84 aa6.45□□□□□ -1.38
TPM1-221ENST00000559831 COX7BP24311 80 aa6.45□□□□□ -1.38
TPM1-221ENST00000559831 SPRR1AP35321 89 aa6.45□□□□□ -1.38
TPM1-221ENST00000559831 VAMP3Q15836 100 aa6.45□□□□□ -1.38
TPM1-221ENST00000559831 COX6CP09669 75 aa6.44□□□□□ -1.38
TPM1-221ENST00000559831 SCGB1C2P0DMR2 95 aa6.44□□□□□ -1.38
TPM1-221ENST00000559831 UBE2AP49459 152 aa6.44□□□□□ -1.38
TPM1-221ENST00000559831 RPL37AP61513 92 aaKnown RBP6.44□□□□□ -1.38
TPM1-221ENST00000559831 PRLHP81277 87 aa6.44□□□□□ -1.38
TPM1-221ENST00000559831 APOBP04114 4563 aaKnown RBP6.44□□□□□ -1.38
TPM1-221ENST00000559831 B5MCH6 92 aa6.43□□□□□ -1.38
TPM1-221ENST00000559831 KRTAP4-16G5E9R7 235 aaPredicted RBP6.43□□□□□ -1.38
TPM1-221ENST00000559831 ELOF1P60002 83 aaKnown RBP6.42□□□□□ -1.38
TPM1-221ENST00000559831 TRBV7-6A0A0J9YX20 115 aa6.41□□□□□ -1.38
TPM1-221ENST00000559831 LYRM7Q5U5X0 104 aa6.41□□□□□ -1.38
TPM1-221ENST00000559831 Q6ZRX8 168 aa6.41□□□□□ -1.38
TPM1-221ENST00000559831 CLEC2BQ92478 149 aa6.41□□□□□ -1.38
TPM1-221ENST00000559831 A0A1W2PPM0 123 aa6.4□□□□□ -1.38
TPM1-221ENST00000559831 H0YGX0 51 aa6.4□□□□□ -1.38
TPM1-221ENST00000559831 IGLV7-43P04211 117 aa6.4□□□□□ -1.38
TPM1-221ENST00000559831 HIGD2AQ9BW72 106 aa6.4□□□□□ -1.38
TPM1-221ENST00000559831 FAM229AH3BQW9 127 aa6.39□□□□□ -1.39
TPM1-221ENST00000559831 FABP2P12104 132 aa6.39□□□□□ -1.39
TPM1-221ENST00000559831 FAM218AQ96MZ4 157 aa6.39□□□□□ -1.39
TPM1-221ENST00000559831 Q9BRP9 147 aa6.39□□□□□ -1.39
TPM1-221ENST00000559831 SLC25A20O43772 301 aa6.38□□□□□ -1.39
TPM1-221ENST00000559831 ZNF861PO60384 105 aa6.38□□□□□ -1.39
TPM1-221ENST00000559831 LINC00575Q6W349 94 aa6.38□□□□□ -1.39
TPM1-221ENST00000559831 KRTAP13-1Q8IUC0 172 aa6.38□□□□□ -1.39
TPM1-221ENST00000559831 SMCR5Q8TEV8 140 aa6.38□□□□□ -1.39
TPM1-221ENST00000559831 DHRS4-AS1Q9P1J3 65 aa6.38□□□□□ -1.39
TPM1-221ENST00000559831 hADV29S1A0JD25 119 aa6.37□□□□□ -1.39
TPM1-221ENST00000559831 H0Y9J4 135 aa6.37□□□□□ -1.39
TPM1-221ENST00000559831 SNCGO76070 127 aa6.37□□□□□ -1.39
TPM1-221ENST00000559831 TCL1BO95988 128 aa6.37□□□□□ -1.39
TPM1-221ENST00000559831 PLA2G1BP04054 148 aaKnown RBP6.37□□□□□ -1.39
TPM1-221ENST00000559831 Q5VSD8 79 aa6.37□□□□□ -1.39
TPM1-221ENST00000559831 ERC2-IT1O76042 136 aa6.36□□□□□ -1.39
TPM1-221ENST00000559831 INAFM2P0DMQ5 153 aa6.36□□□□□ -1.39
TPM1-221ENST00000559831 ATXN8Q156A1 80 aa6.36□□□□□ -1.39
TPM1-221ENST00000559831 SPCS1Q9Y6A9 102 aa6.36□□□□□ -1.39
TPM1-221ENST00000559831 LST1O00453 97 aa6.35□□□□□ -1.39
TPM1-221ENST00000559831 TRBV20-1A0A075B6N2 111 aa6.34□□□□□ -1.39
TPM1-221ENST00000559831 A0A1B0GX51 115 aa6.34□□□□□ -1.39
TPM1-221ENST00000559831 DNAL4O96015 105 aa6.34□□□□□ -1.39
TPM1-221ENST00000559831 ST20-AS1Q8NBB2 130 aa6.34□□□□□ -1.39
TPM1-221ENST00000559831 HSPG2P98160 4391 aa6.34□□□□□ -1.4
TPM1-221ENST00000559831 KRTAP10-4P60372 401 aaPredicted RBP6.33□□□□□ -1.4
TPM1-221ENST00000559831 Q6ZQY7 126 aa6.33□□□□□ -1.4
TPM1-221ENST00000559831 Q8N1X5 172 aa6.33□□□□□ -1.4
TPM1-221ENST00000559831 DEFB105AQ8NG35 78 aa6.33□□□□□ -1.4
TPM1-221ENST00000559831 KRTAP17-1Q9BYP8 105 aa6.33□□□□□ -1.4
TPM1-221ENST00000559831 A0A1B0GV90 55 aa6.32□□□□□ -1.4
TPM1-221ENST00000559831 K7EP34 96 aa6.32□□□□□ -1.4
TPM1-221ENST00000559831 TRACP01848 142 aa6.32□□□□□ -1.4
TPM1-221ENST00000559831 H3BMG7 143 aa6.31□□□□□ -1.4
TPM1-221ENST00000559831 GAGE2AQ6NT46 116 aa6.31□□□□□ -1.4
TPM1-221ENST00000559831 SPINK6Q6UWN8 80 aa6.31□□□□□ -1.4
TPM1-221ENST00000559831 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.31□□□□□ -1.4
TPM1-221ENST00000559831 ZNF706Q9Y5V0 76 aaPredicted RBP6.31□□□□□ -1.4
TPM1-221ENST00000559831 RYR1P21817 5038 aa6.31□□□□□ -1.4
TPM1-221ENST00000559831 FAT1Q14517 4588 aa6.3□□□□□ -1.4
TPM1-221ENST00000559831 GTF2H5Q6ZYL4 71 aa6.3□□□□□ -1.4
TPM1-221ENST00000559831 ORMDL1Q9P0S3 153 aa6.3□□□□□ -1.4
TPM1-221ENST00000559831 VPS13BQ7Z7G8 4022 aa6.3□□□□□ -1.4
TPM1-221ENST00000559831 KIAA1109Q2LD37 5005 aa6.29□□□□□ -1.4
TPM1-221ENST00000559831 C9JAW5 83 aa6.29□□□□□ -1.4
TPM1-221ENST00000559831 SMCPP49901 116 aaPredicted RBP6.29□□□□□ -1.4
TPM1-221ENST00000559831 MTURNQ8N3F0 131 aa6.29□□□□□ -1.4
TPM1-221ENST00000559831 SPRR4Q96PI1 79 aa6.29□□□□□ -1.4
TPM1-221ENST00000559831 HERC2O95714 4834 aa6.28□□□□□ -1.4
TPM1-221ENST00000559831 LCE2BO14633 110 aa6.28□□□□□ -1.4
TPM1-221ENST00000559831 TEX49A0A1B0GTD5 131 aa6.27□□□□□ -1.41
TPM1-221ENST00000559831 BAALC-AS2P0C853 105 aa6.27□□□□□ -1.41
TPM1-221ENST00000559831 LINC01547P58512 204 aaPredicted RBP6.27□□□□□ -1.41
TPM1-221ENST00000559831 OCIAD2Q56VL3 154 aa6.27□□□□□ -1.41
TPM1-221ENST00000559831 ANAPC11Q9NYG5 84 aa6.27□□□□□ -1.41
TPM1-221ENST00000559831 IGLV5-48A0A075B6I7 105 aa6.26□□□□□ -1.41
TPM1-221ENST00000559831 GHRHP01286 108 aa6.26□□□□□ -1.41
TPM1-221ENST00000559831 Q8N377 158 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms