RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 BOD1L2Q8IYS8 172 aa7.36□□□□□ -1.23
TPM1-220ENST00000559556 ATOH7Q8N100 152 aa7.36□□□□□ -1.23
TPM1-220ENST00000559556 ETDCA0A1B0GVM5 59 aa7.35□□□□□ -1.23
TPM1-220ENST00000559556 E9PLD3 99 aa7.35□□□□□ -1.23
TPM1-220ENST00000559556 NCR3O14931 201 aa7.35□□□□□ -1.23
TPM1-220ENST00000559556 SMIM13P0DJ93 91 aa7.35□□□□□ -1.23
TPM1-220ENST00000559556 SMCR5Q8TEV8 140 aa7.35□□□□□ -1.23
TPM1-220ENST00000559556 KRTAP4-1Q9BYQ7 146 aa7.35□□□□□ -1.23
TPM1-220ENST00000559556 LEPROTO15243 131 aa7.34□□□□□ -1.23
TPM1-220ENST00000559556 RPS29P62273 56 aaKnown RBP7.34□□□□□ -1.23
TPM1-220ENST00000559556 MIR7-3HGQ8N6C7 128 aa7.34□□□□□ -1.23
TPM1-220ENST00000559556 TRBV10-3A0A0K0K1G6 114 aa7.33□□□□□ -1.24
TPM1-220ENST00000559556 LINC01547P58512 204 aaPredicted RBP7.33□□□□□ -1.24
TPM1-220ENST00000559556 SEC61BP60468 96 aaKnown RBP7.33□□□□□ -1.24
TPM1-220ENST00000559556 HERV-K104P63124 156 aa7.33□□□□□ -1.24
TPM1-220ENST00000559556 SPATA45Q537H7 98 aa7.33□□□□□ -1.24
TPM1-220ENST00000559556 MEIG1Q5JSS6 88 aa7.33□□□□□ -1.24
TPM1-220ENST00000559556 C12orf57Q99622 126 aa7.33□□□□□ -1.24
TPM1-220ENST00000559556 PAM16Q9Y3D7 125 aa7.33□□□□□ -1.24
TPM1-220ENST00000559556 LGALS3P17931 250 aaKnown RBP7.32□□□□□ -1.24
TPM1-220ENST00000559556 NMUP48645 174 aa7.32□□□□□ -1.24
TPM1-220ENST00000559556 LINC00518Q8N0U6 118 aa7.32□□□□□ -1.24
TPM1-220ENST00000559556 Q8N377 158 aa7.32□□□□□ -1.24
TPM1-220ENST00000559556 NDUFA12Q9UI09 145 aa7.32□□□□□ -1.24
TPM1-220ENST00000559556 J3QQQ9 107 aa7.31□□□□□ -1.24
TPM1-220ENST00000559556 MOBPQ13875 183 aa7.31□□□□□ -1.24
TPM1-220ENST00000559556 ANKRD39Q53RE8 183 aa7.31□□□□□ -1.24
TPM1-220ENST00000559556 LINC00587B1AMM8 73 aa7.3□□□□□ -1.24
TPM1-220ENST00000559556 B5MCH6 92 aa7.3□□□□□ -1.24
TPM1-220ENST00000559556 GAGE2AQ6NT46 116 aa7.3□□□□□ -1.24
TPM1-220ENST00000559556 MYMXA0A1B0GTQ4 84 aa7.29□□□□□ -1.24
TPM1-220ENST00000559556 SSBP3-AS1Q7Z2R9 100 aa7.29□□□□□ -1.24
TPM1-220ENST00000559556 IGLV9-49A0A0B4J1Y8 123 aa7.28□□□□□ -1.24
TPM1-220ENST00000559556 LOC107984156A0A0G2JMH3 177 aa7.28□□□□□ -1.24
TPM1-220ENST00000559556 DLEU1O43261 78 aa7.28□□□□□ -1.24
TPM1-220ENST00000559556 SLC25A20O43772 301 aa7.28□□□□□ -1.24
TPM1-220ENST00000559556 ERC2-IT1O76042 136 aa7.28□□□□□ -1.24
TPM1-220ENST00000559556 COX8AP10176 69 aa7.28□□□□□ -1.24
TPM1-220ENST00000559556 Q6ZRX8 168 aa7.28□□□□□ -1.24
TPM1-220ENST00000559556 ARL17AQ8IVW1 177 aa7.28□□□□□ -1.24
TPM1-220ENST00000559556 Q9BRP9 147 aa7.28□□□□□ -1.24
TPM1-220ENST00000559556 TRBV10-2A0A0K0K1G8 114 aa7.27□□□□□ -1.25
TPM1-220ENST00000559556 TSTD3H0UI37 97 aa7.27□□□□□ -1.25
TPM1-220ENST00000559556 XP32Q5T750 250 aa7.27□□□□□ -1.25
TPM1-220ENST00000559556 SLC25A34Q6PIV7 304 aa7.27□□□□□ -1.25
TPM1-220ENST00000559556 ZNF815PA8K554 130 aa7.26□□□□□ -1.25
TPM1-220ENST00000559556 DDTP30046 118 aa7.26□□□□□ -1.25
TPM1-220ENST00000559556 UQCR10Q9UDW1 63 aa7.26□□□□□ -1.25
TPM1-220ENST00000559556 TSPEAR-AS2P59090 65 aa7.25□□□□□ -1.25
TPM1-220ENST00000559556 PCP2Q8IVA1 136 aa7.25□□□□□ -1.25
TPM1-220ENST00000559556 C14orf144Q96I85 54 aa7.25□□□□□ -1.25
TPM1-220ENST00000559556 SCGB1D4Q6XE38 83 aa7.24□□□□□ -1.25
TPM1-220ENST00000559556 SPANXB1Q9NS25 103 aaPredicted RBP7.24□□□□□ -1.25
TPM1-220ENST00000559556 MIEN1Q9BRT3 115 aa7.23□□□□□ -1.25
TPM1-220ENST00000559556 TIMM17BO60830 172 aa7.22□□□□□ -1.25
TPM1-220ENST00000559556 IGLV6-57P01721 117 aa7.22□□□□□ -1.25
TPM1-220ENST00000559556 LCE2CQ5TA81 110 aa7.22□□□□□ -1.25
TPM1-220ENST00000559556 HIGD1BQ9P298 99 aa7.22□□□□□ -1.25
TPM1-220ENST00000559556 A0A0J9YXY3 114 aa7.21□□□□□ -1.26
TPM1-220ENST00000559556 NDUFC2O95298 119 aa7.21□□□□□ -1.26
TPM1-220ENST00000559556 Q6ZVH6 145 aa7.21□□□□□ -1.26
TPM1-220ENST00000559556 COPS9Q8WXC6 57 aa7.21□□□□□ -1.26
TPM1-220ENST00000559556 PRO1933Q9H354 126 aa7.21□□□□□ -1.26
TPM1-220ENST00000559556 FSIP2Q5CZC0 6907 aa7.2□□□□□ -1.26
TPM1-220ENST00000559556 KRTAP19-2Q3LHN2 52 aa7.2□□□□□ -1.26
TPM1-220ENST00000559556 C9orf153Q5TBE3 101 aa7.2□□□□□ -1.26
TPM1-220ENST00000559556 TTTY13Q9BZ97 58 aa7.2□□□□□ -1.26
TPM1-220ENST00000559556 CRCT1Q9UGL9 99 aa7.2□□□□□ -1.26
TPM1-220ENST00000559556 TRAV23DV6A0A075B6W5 121 aa7.19□□□□□ -1.26
TPM1-220ENST00000559556 S100A7L2Q5SY68 101 aa7.19□□□□□ -1.26
TPM1-220ENST00000559556 FLGP20930 4061 aaPredicted RBP7.18□□□□□ -1.26
TPM1-220ENST00000559556 ZNF73O43830 326 aaPredicted RBP7.17□□□□□ -1.26
TPM1-220ENST00000559556 IFITM1P13164 125 aa7.17□□□□□ -1.26
TPM1-220ENST00000559556 TAL2Q16559 108 aa7.17□□□□□ -1.26
TPM1-220ENST00000559556 SPANXDQ9BXN6 97 aa7.16□□□□□ -1.26
TPM1-220ENST00000559556 SPANXCQ9NY87 97 aa7.16□□□□□ -1.26
TPM1-220ENST00000559556 EIF4EBP3O60516 100 aaPredicted RBP7.15□□□□□ -1.26
TPM1-220ENST00000559556 SOSTDC1Q6X4U4 206 aa7.15□□□□□ -1.26
TPM1-220ENST00000559556 C2orf91Q6ZV80 131 aa7.15□□□□□ -1.26
TPM1-220ENST00000559556 ST20-AS1Q8NBB2 130 aa7.15□□□□□ -1.26
TPM1-220ENST00000559556 HIST1H4GQ99525 98 aa7.15□□□□□ -1.26
TPM1-220ENST00000559556 MT1HP80294 61 aa7.14□□□□□ -1.27
TPM1-220ENST00000559556 HSD52Q0P140 79 aa7.14□□□□□ -1.27
TPM1-220ENST00000559556 LITAFQ99732 161 aa7.14□□□□□ -1.27
TPM1-220ENST00000559556 LIMD2Q9BT23 127 aa7.14□□□□□ -1.27
TPM1-220ENST00000559556 SPRR1BP22528 89 aa7.13□□□□□ -1.27
TPM1-220ENST00000559556 CBY1Q9Y3M2 126 aa7.13□□□□□ -1.27
TPM1-220ENST00000559556 M0R143 59 aa7.12□□□□□ -1.27
TPM1-220ENST00000559556 NPC2P61916 151 aa7.12□□□□□ -1.27
TPM1-220ENST00000559556 PCOTHQ58A44 107 aa7.12□□□□□ -1.27
TPM1-220ENST00000559556 ADAMTSL4-AS1Q5T5F5 129 aa7.12□□□□□ -1.27
TPM1-220ENST00000559556 TMEM238LA0A1B0GVL6 79 aa7.11□□□□□ -1.27
TPM1-220ENST00000559556 A6NJY4 79 aa7.11□□□□□ -1.27
TPM1-220ENST00000559556 CFC1BP0CG36 223 aa7.11□□□□□ -1.27
TPM1-220ENST00000559556 CEND1Q8N111 149 aa7.11□□□□□ -1.27
TPM1-220ENST00000559556 LINC00308Q8TCZ7 52 aa7.11□□□□□ -1.27
TPM1-220ENST00000559556 IGLV8-61A0A075B6I0 122 aa7.1□□□□□ -1.27
TPM1-220ENST00000559556 LCE2BO14633 110 aa7.1□□□□□ -1.27
TPM1-220ENST00000559556 HINT1P49773 126 aaPredicted RBP7.1□□□□□ -1.27
TPM1-220ENST00000559556 MUSTN1Q8IVN3 82 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 346.4 ms