RNA–Protein interactions for RNA: ENST00000559485.2

RGPD1-204, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD1, Length 5,247 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-204ENST00000559485 HRES1P13985 223 aa1.53□□□□□ -2.16
RGPD1-204ENST00000559485 ROMO1P60602 79 aa1.53□□□□□ -2.16
RGPD1-204ENST00000559485 IGFL1Q6UW32 110 aa1.53□□□□□ -2.16
RGPD1-204ENST00000559485 A0A096LPF7 62 aa1.53□□□□□ -2.16
RGPD1-204ENST00000559485 A0A1W2PNM2 257 aa1.53□□□□□ -2.16
RGPD1-204ENST00000559485 PRAC1Q96KF2 57 aa1.53□□□□□ -2.16
RGPD1-204ENST00000559485 NAV3Q8IVL0 2385 aa1.53□□□□□ -2.16
RGPD1-204ENST00000559485 CHD7Q9P2D1 2997 aa1.53□□□□□ -2.16
RGPD1-204ENST00000559485 PRRC2AP48634 2157 aaKnown RBP1.53□□□□□ -2.16
RGPD1-204ENST00000559485 IGKV2-24A0A0C4DH68 120 aa1.53□□□□□ -2.16
RGPD1-204ENST00000559485 SVEP1Q4LDE5 3571 aa1.53□□□□□ -2.16
RGPD1-204ENST00000559485 RTL8CO15255 209 aa1.53□□□□□ -2.16
RGPD1-204ENST00000559485 SDK1Q7Z5N4 2213 aa1.53□□□□□ -2.16
RGPD1-204ENST00000559485 ADGRG4Q8IZF6 3080 aa1.53□□□□□ -2.17
RGPD1-204ENST00000559485 IGLV7-43P04211 117 aa1.53□□□□□ -2.17
RGPD1-204ENST00000559485 LUZP6Q538Z0 58 aa1.53□□□□□ -2.17
RGPD1-204ENST00000559485 UBE2DNLQ8IWF7 75 aa1.53□□□□□ -2.17
RGPD1-204ENST00000559485 MUC4Q99102 2169 aa1.52□□□□□ -2.17
RGPD1-204ENST00000559485 TNCP24821 2201 aa1.52□□□□□ -2.17
RGPD1-204ENST00000559485 M0R2N4 97 aa1.52□□□□□ -2.17
RGPD1-204ENST00000559485 SSBP3-AS1Q7Z2R9 100 aa1.52□□□□□ -2.17
RGPD1-204ENST00000559485 CUBNO60494 3623 aa1.52□□□□□ -2.17
RGPD1-204ENST00000559485 GIG44P09565 113 aaPredicted RBP1.52□□□□□ -2.17
RGPD1-204ENST00000559485 SPRR1AP35321 89 aa1.52□□□□□ -2.17
RGPD1-204ENST00000559485 VPS13CQ709C8 3753 aa1.52□□□□□ -2.17
RGPD1-204ENST00000559485 INTS1Q8N201 2190 aaKnown RBP1.52□□□□□ -2.17
RGPD1-204ENST00000559485 CELSR1Q9NYQ6 3014 aa1.52□□□□□ -2.17
RGPD1-204ENST00000559485 KRTAP29-1A8MX34 341 aaPredicted RBP1.52□□□□□ -2.17
RGPD1-204ENST00000559485 LY6G6CO95867 125 aa1.52□□□□□ -2.17
RGPD1-204ENST00000559485 KRTAP10-9P60411 292 aa1.52□□□□□ -2.17
RGPD1-204ENST00000559485 DEFB135Q30KP9 77 aa1.52□□□□□ -2.17
RGPD1-204ENST00000559485 URB1O60287 2271 aaKnown RBP1.52□□□□□ -2.17
RGPD1-204ENST00000559485 DNAJC13O75165 2243 aa1.51□□□□□ -2.17
RGPD1-204ENST00000559485 MMP24-AS1A0A0U1RRL7 71 aa1.51□□□□□ -2.17
RGPD1-204ENST00000559485 MGAQ8IWI9 3026 aa1.51□□□□□ -2.17
RGPD1-204ENST00000559485 KALRNO60229 2985 aa1.51□□□□□ -2.17
RGPD1-204ENST00000559485 CSMD3Q7Z407 3707 aa1.51□□□□□ -2.17
RGPD1-204ENST00000559485 DNAH10OSP0CZ25 163 aa1.51□□□□□ -2.17
RGPD1-204ENST00000559485 SPRR1BP22528 89 aa1.51□□□□□ -2.17
RGPD1-204ENST00000559485 DEFB116Q30KQ4 102 aa1.51□□□□□ -2.17
RGPD1-204ENST00000559485 CNTRLQ7Z7A1 2325 aa1.51□□□□□ -2.17
RGPD1-204ENST00000559485 DMXL1Q9Y485 3027 aa1.5□□□□□ -2.17
RGPD1-204ENST00000559485 COX6B2Q6YFQ2 88 aa1.5□□□□□ -2.17
RGPD1-204ENST00000559485 BRWD1Q9NSI6 2320 aa1.5□□□□□ -2.17
RGPD1-204ENST00000559485 OTOGQ6ZRI0 2925 aa1.5□□□□□ -2.17
RGPD1-204ENST00000559485 NACAE9PAV3 2078 aa1.49□□□□□ -2.17
RGPD1-204ENST00000559485 KNL1Q8NG31 2342 aa1.49□□□□□ -2.17
RGPD1-204ENST00000559485 TRIOBPQ9H2D6 2365 aa1.49□□□□□ -2.17
RGPD1-204ENST00000559485 ARFGEF3Q5TH69 2177 aa1.49□□□□□ -2.17
RGPD1-204ENST00000559485 KNTC1P50748 2209 aa1.49□□□□□ -2.17
RGPD1-204ENST00000559485 PRLHP81277 87 aa1.49□□□□□ -2.17
RGPD1-204ENST00000559485 LINC00472Q9H8W2 130 aa1.49□□□□□ -2.17
RGPD1-204ENST00000559485 DEFB4AO15263 64 aa1.48□□□□□ -2.17
RGPD1-204ENST00000559485 ZNF861PO60384 105 aa1.48□□□□□ -2.17
RGPD1-204ENST00000559485 ATMQ13315 3056 aa1.48□□□□□ -2.17
RGPD1-204ENST00000559485 A0A1B0GU33 70 aa1.48□□□□□ -2.17
RGPD1-204ENST00000559485 Q8NDZ9 215 aa1.48□□□□□ -2.17
RGPD1-204ENST00000559485 RTTNQ86VV8 2226 aa1.48□□□□□ -2.17
RGPD1-204ENST00000559485 KRTAP4-16G5E9R7 235 aaPredicted RBP1.48□□□□□ -2.17
RGPD1-204ENST00000559485 LINC00483Q53H64 154 aa1.48□□□□□ -2.17
RGPD1-204ENST00000559485 ARHGAP32A7KAX9 2087 aa1.48□□□□□ -2.17
RGPD1-204ENST00000559485 LCE3BQ5TA77 95 aa1.48□□□□□ -2.17
RGPD1-204ENST00000559485 ZZEF1O43149 2961 aa1.48□□□□□ -2.17
RGPD1-204ENST00000559485 KRTAP19-1Q8IUB9 90 aa1.47□□□□□ -2.17
RGPD1-204ENST00000559485 ZNF318Q5VUA4 2279 aa1.47□□□□□ -2.17
RGPD1-204ENST00000559485 H1FX-AS1Q4G0G2 97 aa1.47□□□□□ -2.17
RGPD1-204ENST00000559485 IGKV2D-30A0A075B6S6 120 aa1.47□□□□□ -2.17
RGPD1-204ENST00000559485 IGKV2-30P06310 120 aa1.47□□□□□ -2.17
RGPD1-204ENST00000559485 KRTAP26-1Q6PEX3 210 aa1.47□□□□□ -2.17
RGPD1-204ENST00000559485 TPRP12270 2363 aaKnown RBP1.47□□□□□ -2.17
RGPD1-204ENST00000559485 DMXL2Q8TDJ6 3036 aa1.47□□□□□ -2.17
RGPD1-204ENST00000559485 CASC10Q5T4H9 136 aa1.47□□□□□ -2.17
RGPD1-204ENST00000559485 FAM168BA1KXE4 195 aa1.46□□□□□ -2.18
RGPD1-204ENST00000559485 IGLV5-52A0A0A0MRZ9 124 aa1.46□□□□□ -2.18
RGPD1-204ENST00000559485 SMR3AQ99954 134 aa1.46□□□□□ -2.18
RGPD1-204ENST00000559485 KRTAP4-9Q9BYQ8 210 aa1.46□□□□□ -2.18
RGPD1-204ENST00000559485 NCOR1O75376 2440 aa1.46□□□□□ -2.18
RGPD1-204ENST00000559485 PANO1I0J062 215 aa1.45□□□□□ -2.18
RGPD1-204ENST00000559485 AHCTF1Q8WYP5 2266 aa1.45□□□□□ -2.18
RGPD1-204ENST00000559485 KRTAP10-3P60369 221 aa1.45□□□□□ -2.18
RGPD1-204ENST00000559485 KRTAP1-1Q07627 177 aa1.45□□□□□ -2.18
RGPD1-204ENST00000559485 PLXNB1O43157 2135 aa1.45□□□□□ -2.18
RGPD1-204ENST00000559485 ZDBF2Q9HCK1 2354 aa1.45□□□□□ -2.18
RGPD1-204ENST00000559485 A8MUU9 505 aa1.45□□□□□ -2.18
RGPD1-204ENST00000559485 ICE1Q9Y2F5 2266 aa1.45□□□□□ -2.18
RGPD1-204ENST00000559485 MAP1BP46821 2468 aaKnown RBP1.45□□□□□ -2.18
RGPD1-204ENST00000559485 SPINK1P00995 79 aa1.44□□□□□ -2.18
RGPD1-204ENST00000559485 Q5W150 140 aa1.44□□□□□ -2.18
RGPD1-204ENST00000559485 SPINK6Q6UWN8 80 aa1.44□□□□□ -2.18
RGPD1-204ENST00000559485 C20orf166-AS1Q96NR2 134 aa1.44□□□□□ -2.18
RGPD1-204ENST00000559485 CACNA1BQ00975 2339 aa1.44□□□□□ -2.18
RGPD1-204ENST00000559485 RP1L1Q8IWN7 2480 aaPredicted RBP1.44□□□□□ -2.18
RGPD1-204ENST00000559485 LCE1DQ5T752 114 aa1.44□□□□□ -2.18
RGPD1-204ENST00000559485 A0A0G2JQZ4 141 aa1.44□□□□□ -2.18
RGPD1-204ENST00000559485 RPL37P61927 97 aaKnown RBP1.44□□□□□ -2.18
RGPD1-204ENST00000559485 CUL9Q8IWT3 2517 aa1.44□□□□□ -2.18
RGPD1-204ENST00000559485 CIRBP-AS1Q8TBR5 109 aa1.43□□□□□ -2.18
RGPD1-204ENST00000559485 CEP290O15078 2479 aa1.43□□□□□ -2.18
RGPD1-204ENST00000559485 A0A096LNI7 61 aa1.43□□□□□ -2.18
RGPD1-204ENST00000559485 OTOGLQ3ZCN5 2332 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms