RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 HSBP1L1C9JCN9 74 aa6.82□□□□□ -1.32
SNX1-204ENST00000559061 DDTP30046 118 aa6.82□□□□□ -1.32
SNX1-204ENST00000559061 RPL28P46779 137 aaKnown RBP6.82□□□□□ -1.32
SNX1-204ENST00000559061 FAM19A1Q7Z5A9 133 aa6.82□□□□□ -1.32
SNX1-204ENST00000559061 MUSTN1Q8IVN3 82 aa6.82□□□□□ -1.32
SNX1-204ENST00000559061 PAM16Q9Y3D7 125 aa6.82□□□□□ -1.32
SNX1-204ENST00000559061 UBE2AP49459 152 aa6.81□□□□□ -1.32
SNX1-204ENST00000559061 PRR26Q8N8Z3 221 aa6.81□□□□□ -1.32
SNX1-204ENST00000559061 HMCN2Q8NDA2 5059 aa6.81□□□□□ -1.32
SNX1-204ENST00000559061 A0A087X002 238 aa6.8□□□□□ -1.32
SNX1-204ENST00000559061 B5MCH6 92 aa6.8□□□□□ -1.32
SNX1-204ENST00000559061 DLEU1O43261 78 aa6.8□□□□□ -1.32
SNX1-204ENST00000559061 SPATA45Q537H7 98 aa6.8□□□□□ -1.32
SNX1-204ENST00000559061 C2orf91Q6ZV80 131 aa6.8□□□□□ -1.32
SNX1-204ENST00000559061 SMCR5Q8TEV8 140 aa6.8□□□□□ -1.32
SNX1-204ENST00000559061 C14orf144Q96I85 54 aa6.8□□□□□ -1.32
SNX1-204ENST00000559061 ANAPC11Q9NYG5 84 aa6.8□□□□□ -1.32
SNX1-204ENST00000559061 IFITM1P13164 125 aa6.79□□□□□ -1.32
SNX1-204ENST00000559061 Q6ZVH6 145 aa6.79□□□□□ -1.32
SNX1-204ENST00000559061 Q9BRP9 147 aa6.79□□□□□ -1.32
SNX1-204ENST00000559061 TRAV23DV6A0A075B6W5 121 aa6.78□□□□□ -1.32
SNX1-204ENST00000559061 ERC2-IT1O76042 136 aa6.78□□□□□ -1.32
SNX1-204ENST00000559061 C4orf48Q5BLP8 95 aa6.78□□□□□ -1.32
SNX1-204ENST00000559061 VAMP8Q9BV40 100 aa6.78□□□□□ -1.32
SNX1-204ENST00000559061 KRTAP13-2Q52LG2 175 aa6.77□□□□□ -1.33
SNX1-204ENST00000559061 ZNF73O43830 326 aaPredicted RBP6.76□□□□□ -1.33
SNX1-204ENST00000559061 S100A7L2Q5SY68 101 aa6.76□□□□□ -1.33
SNX1-204ENST00000559061 XP32Q5T750 250 aa6.76□□□□□ -1.33
SNX1-204ENST00000559061 Q6ZRX8 168 aa6.76□□□□□ -1.33
SNX1-204ENST00000559061 HIGD2AQ9BW72 106 aa6.76□□□□□ -1.33
SNX1-204ENST00000559061 A4D1N5 150 aa6.75□□□□□ -1.33
SNX1-204ENST00000559061 ETDCA0A1B0GVM5 59 aa6.74□□□□□ -1.33
SNX1-204ENST00000559061 SPRR4Q96PI1 79 aa6.74□□□□□ -1.33
SNX1-204ENST00000559061 HIGD1BQ9P298 99 aa6.74□□□□□ -1.33
SNX1-204ENST00000559061 SLC25A34Q6PIV7 304 aa6.73□□□□□ -1.33
SNX1-204ENST00000559061 LINC00518Q8N0U6 118 aa6.73□□□□□ -1.33
SNX1-204ENST00000559061 OR13C6PQ8NH95 151 aa6.73□□□□□ -1.33
SNX1-204ENST00000559061 C6orf99Q4VX62 202 aa6.72□□□□□ -1.33
SNX1-204ENST00000559061 FAM229BQ4G0N7 80 aa6.71□□□□□ -1.34
SNX1-204ENST00000559061 LINC00483Q53H64 154 aa6.71□□□□□ -1.34
SNX1-204ENST00000559061 COPS9Q8WXC6 57 aa6.71□□□□□ -1.34
SNX1-204ENST00000559061 C12orf57Q99622 126 aa6.71□□□□□ -1.34
SNX1-204ENST00000559061 LOC105371267A0A1B0GV96 52 aa6.7□□□□□ -1.34
SNX1-204ENST00000559061 ELOF1P60002 83 aaKnown RBP6.7□□□□□ -1.34
SNX1-204ENST00000559061 C3orf22Q8N5N4 141 aa6.7□□□□□ -1.34
SNX1-204ENST00000559061 ST20-AS1Q8NBB2 130 aa6.7□□□□□ -1.34
SNX1-204ENST00000559061 SMIM11BQ8TCY0 68 aa6.7□□□□□ -1.34
SNX1-204ENST00000559061 HIST1H4GQ99525 98 aa6.7□□□□□ -1.34
SNX1-204ENST00000559061 A6NDN8 102 aa6.69□□□□□ -1.34
SNX1-204ENST00000559061 CFC1BP0CG36 223 aa6.68□□□□□ -1.34
SNX1-204ENST00000559061 CFC1P0CG37 223 aa6.68□□□□□ -1.34
SNX1-204ENST00000559061 CRYGAP11844 174 aa6.68□□□□□ -1.34
SNX1-204ENST00000559061 TRAV13-2A0A0B4J235 113 aa6.67□□□□□ -1.34
SNX1-204ENST00000559061 RPL13AP40429 203 aaKnown RBP6.67□□□□□ -1.34
SNX1-204ENST00000559061 FXYD2P54710 66 aa6.67□□□□□ -1.34
SNX1-204ENST00000559061 S100A12P80511 92 aa6.67□□□□□ -1.34
SNX1-204ENST00000559061 KRTAP4-8Q9BYQ9 185 aa6.67□□□□□ -1.34
SNX1-204ENST00000559061 TRBV7-6A0A0J9YX20 115 aa6.66□□□□□ -1.34
SNX1-204ENST00000559061 COX7BP24311 80 aa6.66□□□□□ -1.34
SNX1-204ENST00000559061 CEND1Q8N111 149 aa6.66□□□□□ -1.34
SNX1-204ENST00000559061 LINC01547P58512 204 aaPredicted RBP6.65□□□□□ -1.34
SNX1-204ENST00000559061 TAL2Q16559 108 aa6.65□□□□□ -1.34
SNX1-204ENST00000559061 GAGE2AQ6NT46 116 aa6.65□□□□□ -1.34
SNX1-204ENST00000559061 TYMSOSQ8TAI1 123 aa6.65□□□□□ -1.34
SNX1-204ENST00000559061 CBY1Q9Y3M2 126 aa6.64□□□□□ -1.35
SNX1-204ENST00000559061 ZNF706Q9Y5V0 76 aaPredicted RBP6.64□□□□□ -1.35
SNX1-204ENST00000559061 A0A0B4J2C4 111 aa6.63□□□□□ -1.35
SNX1-204ENST00000559061 A0A1B0GWB2 263 aa6.63□□□□□ -1.35
SNX1-204ENST00000559061 SMIM6P0DI80 62 aa6.63□□□□□ -1.35
SNX1-204ENST00000559061 SPRR1BP22528 89 aa6.63□□□□□ -1.35
SNX1-204ENST00000559061 PRO1933Q9H354 126 aa6.63□□□□□ -1.35
SNX1-204ENST00000559061 UQCR10Q9UDW1 63 aa6.63□□□□□ -1.35
SNX1-204ENST00000559061 LPAP08519 4548 aa6.63□□□□□ -1.35
SNX1-204ENST00000559061 HSD52Q0P140 79 aa6.62□□□□□ -1.35
SNX1-204ENST00000559061 DHRS4-AS1Q9P1J3 65 aa6.62□□□□□ -1.35
SNX1-204ENST00000559061 LRP2P98164 4655 aa6.61□□□□□ -1.35
SNX1-204ENST00000559061 IGLV5-48A0A075B6I7 105 aa6.6□□□□□ -1.35
SNX1-204ENST00000559061 K7ERJ3 54 aa6.6□□□□□ -1.35
SNX1-204ENST00000559061 HINT1P49773 126 aaPredicted RBP6.6□□□□□ -1.35
SNX1-204ENST00000559061 LINC00575Q6W349 94 aa6.6□□□□□ -1.35
SNX1-204ENST00000559061 SMIM29Q86T20 159 aa6.6□□□□□ -1.35
SNX1-204ENST00000559061 MOBPQ13875 183 aa6.59□□□□□ -1.35
SNX1-204ENST00000559061 LINC00304Q8N9R0 145 aa6.59□□□□□ -1.35
SNX1-204ENST00000559061 Q8NBF4 154 aa6.59□□□□□ -1.35
SNX1-204ENST00000559061 IGLV9-49A0A0B4J1Y8 123 aa6.58□□□□□ -1.36
SNX1-204ENST00000559061 H7C2G1 150 aa6.58□□□□□ -1.36
SNX1-204ENST00000559061 TSPAN13O95857 204 aa6.58□□□□□ -1.36
SNX1-204ENST00000559061 FAM218AQ96MZ4 157 aa6.58□□□□□ -1.36
SNX1-204ENST00000559061 BVES-AS1Q5T3Y7 98 aa6.57□□□□□ -1.36
SNX1-204ENST00000559061 Q8N377 158 aa6.57□□□□□ -1.36
SNX1-204ENST00000559061 RAB37Q96AX2 223 aa6.57□□□□□ -1.36
SNX1-204ENST00000559061 NHP2Q9NX24 153 aaKnown RBP6.56□□□□□ -1.36
SNX1-204ENST00000559061 PRO1854Q9UHT4 67 aa6.56□□□□□ -1.36
SNX1-204ENST00000559061 DEFB105AQ8NG35 78 aa6.55□□□□□ -1.36
SNX1-204ENST00000559061 UBR4Q5T4S7 5183 aa6.55□□□□□ -1.36
SNX1-204ENST00000559061 TMEM238LA0A1B0GVL6 79 aa6.54□□□□□ -1.36
SNX1-204ENST00000559061 A6NJY4 79 aa6.54□□□□□ -1.36
SNX1-204ENST00000559061 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.54□□□□□ -1.36
SNX1-204ENST00000559061 TRIAP1O43715 76 aa6.54□□□□□ -1.36
SNX1-204ENST00000559061 Q1RN00 199 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms