RNA–Protein interactions for RNA: ENST00000559043.1

CDC42BPB-204, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 5

Gene CDC42BPB, Length 1,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-204ENST00000559043 C14orf132Q9NPU4 83 aa10.26□□□□□ -0.77
CDC42BPB-204ENST00000559043 DNAH11Q96DT5 4516 aa10.26□□□□□ -0.77
CDC42BPB-204ENST00000559043 TMEM256-PLSCR3K7ERE1 68 aa10.26□□□□□ -0.77
CDC42BPB-204ENST00000559043 GAGE2AQ6NT46 116 aa10.26□□□□□ -0.77
CDC42BPB-204ENST00000559043 LINC00643Q86TS7 51 aa10.26□□□□□ -0.77
CDC42BPB-204ENST00000559043 PKD1P98161 4303 aa10.26□□□□□ -0.77
CDC42BPB-204ENST00000559043 NDUFC2-KCTD14E9PQ53 114 aa10.25□□□□□ -0.77
CDC42BPB-204ENST00000559043 TRBV10-3A0A0K0K1G6 114 aa10.24□□□□□ -0.77
CDC42BPB-204ENST00000559043 VPREB1P12018 145 aa10.24□□□□□ -0.77
CDC42BPB-204ENST00000559043 IMUPQ9GZP8 106 aa10.23□□□□□ -0.77
CDC42BPB-204ENST00000559043 HECTD4Q9Y4D8 3996 aa10.23□□□□□ -0.77
CDC42BPB-204ENST00000559043 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.23□□□□□ -0.77
CDC42BPB-204ENST00000559043 hADV29S1A0JD25 119 aa10.23□□□□□ -0.77
CDC42BPB-204ENST00000559043 JMJD7-PLA2G4BH0Y9G9 81 aa10.23□□□□□ -0.77
CDC42BPB-204ENST00000559043 TRAV23DV6A0A075B6W5 121 aa10.22□□□□□ -0.77
CDC42BPB-204ENST00000559043 NDUFV3P56181 108 aaKnown RBP10.22□□□□□ -0.77
CDC42BPB-204ENST00000559043 KRTAP10-2P60368 255 aa10.22□□□□□ -0.77
CDC42BPB-204ENST00000559043 LINC00336Q6ZUF6 198 aa10.22□□□□□ -0.77
CDC42BPB-204ENST00000559043 A0A1B0GVY2 172 aa10.21□□□□□ -0.78
CDC42BPB-204ENST00000559043 ANAPC13Q9BS18 74 aa10.21□□□□□ -0.78
CDC42BPB-204ENST00000559043 SYCNQ0VAF6 134 aa10.2□□□□□ -0.78
CDC42BPB-204ENST00000559043 DIRC1Q969H9 104 aa10.2□□□□□ -0.78
CDC42BPB-204ENST00000559043 M0R378 163 aa10.19□□□□□ -0.78
CDC42BPB-204ENST00000559043 Q6ZRP5 223 aa10.19□□□□□ -0.78
CDC42BPB-204ENST00000559043 TRBV7-6A0A0J9YX20 115 aa10.19□□□□□ -0.78
CDC42BPB-204ENST00000559043 ZNF73O43830 326 aaPredicted RBP10.18□□□□□ -0.78
CDC42BPB-204ENST00000559043 CCKP06307 115 aa10.18□□□□□ -0.78
CDC42BPB-204ENST00000559043 C14orf177Q52M58 125 aa10.17□□□□□ -0.78
CDC42BPB-204ENST00000559043 H3BQ85 93 aa10.16□□□□□ -0.78
CDC42BPB-204ENST00000559043 ELOF1P60002 83 aaKnown RBP10.16□□□□□ -0.78
CDC42BPB-204ENST00000559043 LINC00846Q9NV44 126 aa10.16□□□□□ -0.78
CDC42BPB-204ENST00000559043 PKHD1P08F94 4074 aa10.16□□□□□ -0.78
CDC42BPB-204ENST00000559043 TLX1NBP0CAT3 122 aa10.15□□□□□ -0.78
CDC42BPB-204ENST00000559043 CNBPP62633 177 aaKnown RBP10.15□□□□□ -0.78
CDC42BPB-204ENST00000559043 COX7BP24311 80 aa10.15□□□□□ -0.78
CDC42BPB-204ENST00000559043 Q6ZQY7 126 aa10.14□□□□□ -0.79
CDC42BPB-204ENST00000559043 DNAH5Q8TE73 4624 aa10.13□□□□□ -0.79
CDC42BPB-204ENST00000559043 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.12□□□□□ -0.79
CDC42BPB-204ENST00000559043 C9orf163Q8N9P6 203 aa10.12□□□□□ -0.79
CDC42BPB-204ENST00000559043 IGLV5-52A0A0A0MRZ9 124 aa10.11□□□□□ -0.79
CDC42BPB-204ENST00000559043 Q6JHZ5 121 aa10.11□□□□□ -0.79
CDC42BPB-204ENST00000559043 RBM3P98179 157 aaKnown RBP10.1□□□□□ -0.79
CDC42BPB-204ENST00000559043 PLA2G2DQ9UNK4 145 aa10.1□□□□□ -0.79
CDC42BPB-204ENST00000559043 LOC110117498A0A087WWA1 95 aa10.1□□□□□ -0.79
CDC42BPB-204ENST00000559043 LINC00528Q8N1L1 170 aa10.1□□□□□ -0.79
CDC42BPB-204ENST00000559043 FAM236AA0A1B0GUQ0 79 aa10.08□□□□□ -0.8
CDC42BPB-204ENST00000559043 FAM236BA0A1B0GV22 79 aa10.08□□□□□ -0.8
CDC42BPB-204ENST00000559043 GHRHP01286 108 aa10.08□□□□□ -0.8
CDC42BPB-204ENST00000559043 Q6ZQT0 140 aa10.08□□□□□ -0.8
CDC42BPB-204ENST00000559043 SERTAD4-AS1Q5TG53 156 aa10.08□□□□□ -0.8
CDC42BPB-204ENST00000559043 KCNQ1DNQ9H478 68 aa10.08□□□□□ -0.8
CDC42BPB-204ENST00000559043 LAMTOR3Q9UHA4 124 aa10.08□□□□□ -0.8
CDC42BPB-204ENST00000559043 KRTAP10-1P60331 282 aa10.06□□□□□ -0.8
CDC42BPB-204ENST00000559043 NKAPP1Q8N9T2 125 aa10.06□□□□□ -0.8
CDC42BPB-204ENST00000559043 EPPK1P58107 5090 aaKnown RBP10.06□□□□□ -0.8
CDC42BPB-204ENST00000559043 IGLV5-37A0A075B6J1 123 aa10.06□□□□□ -0.8
CDC42BPB-204ENST00000559043 C7orf33Q8WU49 177 aa10.06□□□□□ -0.8
CDC42BPB-204ENST00000559043 PANO1I0J062 215 aa10.05□□□□□ -0.8
CDC42BPB-204ENST00000559043 PDE6GP18545 87 aa10.04□□□□□ -0.8
CDC42BPB-204ENST00000559043 HIST1H4AP62805 103 aaKnown RBP10.04□□□□□ -0.8
CDC42BPB-204ENST00000559043 IGKV3D-7A0A0C4DH55 119 aa10.03□□□□□ -0.8
CDC42BPB-204ENST00000559043 DSCR8Q96T75 97 aa10.03□□□□□ -0.8
CDC42BPB-204ENST00000559043 FAM30AQ9NZY2 134 aa10.03□□□□□ -0.8
CDC42BPB-204ENST00000559043 DYNC1H1Q14204 4646 aaKnown RBP10.03□□□□□ -0.8
CDC42BPB-204ENST00000559043 A0A096LNI7 61 aa10.03□□□□□ -0.8
CDC42BPB-204ENST00000559043 CHTF8P0CG12 524 aa10.03□□□□□ -0.8
CDC42BPB-204ENST00000559043 C16orf90A8MZG2 172 aa10.02□□□□□ -0.81
CDC42BPB-204ENST00000559043 CCDC179H3BU77 68 aa10.02□□□□□ -0.81
CDC42BPB-204ENST00000559043 LRP1BQ9NZR2 4599 aa10.02□□□□□ -0.81
CDC42BPB-204ENST00000559043 ATP5EP2Q5VTU8 51 aa10.01□□□□□ -0.81
CDC42BPB-204ENST00000559043 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.01□□□□□ -0.81
CDC42BPB-204ENST00000559043 TRBV7-4A0A0J9YYF1 115 aa10.01□□□□□ -0.81
CDC42BPB-204ENST00000559043 LOC107984640A0A0U1RRK4 108 aa10.01□□□□□ -0.81
CDC42BPB-204ENST00000559043 KRTAP7-1Q8IUC3 87 aa10□□□□□ -0.81
CDC42BPB-204ENST00000559043 IGKV2-24A0A0C4DH68 120 aa9.99□□□□□ -0.81
CDC42BPB-204ENST00000559043 FAM168BA1KXE4 195 aa9.99□□□□□ -0.81
CDC42BPB-204ENST00000559043 UBL5Q9BZL1 73 aa9.99□□□□□ -0.81
CDC42BPB-204ENST00000559043 IGLV1-50A0A075B6I6 118 aa9.99□□□□□ -0.81
CDC42BPB-204ENST00000559043 KRTAP4-16G5E9R7 235 aaPredicted RBP9.98□□□□□ -0.81
CDC42BPB-204ENST00000559043 PRYO14603 147 aa9.98□□□□□ -0.81
CDC42BPB-204ENST00000559043 SPRR1AP35321 89 aa9.98□□□□□ -0.81
CDC42BPB-204ENST00000559043 DNAH8Q96JB1 4490 aa9.97□□□□□ -0.81
CDC42BPB-204ENST00000559043 Q6ZSA8 131 aa9.97□□□□□ -0.81
CDC42BPB-204ENST00000559043 HAMPP81172 84 aa9.95□□□□□ -0.82
CDC42BPB-204ENST00000559043 RPL37AP8A6NKH3 93 aa9.95□□□□□ -0.82
CDC42BPB-204ENST00000559043 B5MCH6 92 aa9.95□□□□□ -0.82
CDC42BPB-204ENST00000559043 Q6ZRX8 168 aa9.95□□□□□ -0.82
CDC42BPB-204ENST00000559043 SPACA4Q8TDM5 124 aa9.95□□□□□ -0.82
CDC42BPB-204ENST00000559043 A0A1W2PNN7 141 aa9.94□□□□□ -0.82
CDC42BPB-204ENST00000559043 ATOX1O00244 68 aa9.94□□□□□ -0.82
CDC42BPB-204ENST00000559043 MRPL55Q7Z7F7 128 aaKnown RBP9.94□□□□□ -0.82
CDC42BPB-204ENST00000559043 DHRS4-AS1Q9P1J3 65 aa9.94□□□□□ -0.82
CDC42BPB-204ENST00000559043 A0A087WVE0 104 aa9.94□□□□□ -0.82
CDC42BPB-204ENST00000559043 LINC01547P58512 204 aaPredicted RBP9.92□□□□□ -0.82
CDC42BPB-204ENST00000559043 Q6ZVQ6 151 aa9.92□□□□□ -0.82
CDC42BPB-204ENST00000559043 FAM19A5Q7Z5A7 132 aaPredicted RBP9.92□□□□□ -0.82
CDC42BPB-204ENST00000559043 Q8N377 158 aa9.92□□□□□ -0.82
CDC42BPB-204ENST00000559043 Q9BRP9 147 aa9.92□□□□□ -0.82
CDC42BPB-204ENST00000559043 ETDCA0A1B0GVM5 59 aa9.9□□□□□ -0.82
CDC42BPB-204ENST00000559043 CIRBP-AS1Q8TBR5 109 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms