RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 TAX1BP3O14907 124 aa11.21□□□□□ -0.61
CLPX-203ENST00000558958 SPRR1AP35321 89 aa11.21□□□□□ -0.61
CLPX-203ENST00000558958 REG3GQ6UW15 175 aa11.21□□□□□ -0.61
CLPX-203ENST00000558958 CDK2AP2O75956 126 aa11.2□□□□□ -0.62
CLPX-203ENST00000558958 C6orf99Q4VX62 202 aa11.2□□□□□ -0.62
CLPX-203ENST00000558958 PSORS1C2Q9UIG4 136 aa11.19□□□□□ -0.62
CLPX-203ENST00000558958 DIRC1Q969H9 104 aa11.19□□□□□ -0.62
CLPX-203ENST00000558958 KRTAP4-16G5E9R7 235 aaPredicted RBP11.18□□□□□ -0.62
CLPX-203ENST00000558958 TRIAP1O43715 76 aa11.17□□□□□ -0.62
CLPX-203ENST00000558958 NAA38Q9BRA0 125 aaKnown RBP11.17□□□□□ -0.62
CLPX-203ENST00000558958 VPS13BQ7Z7G8 4022 aa11.16□□□□□ -0.62
CLPX-203ENST00000558958 C9orf118A6NHY6 69 aa11.16□□□□□ -0.62
CLPX-203ENST00000558958 PSMB2P49721 201 aa11.16□□□□□ -0.62
CLPX-203ENST00000558958 TRBV7-6A0A0J9YX20 115 aa11.15□□□□□ -0.62
CLPX-203ENST00000558958 HSPG2P98160 4391 aa11.15□□□□□ -0.62
CLPX-203ENST00000558958 ETDCA0A1B0GVM5 59 aa11.14□□□□□ -0.63
CLPX-203ENST00000558958 H3BUT2 72 aa11.14□□□□□ -0.63
CLPX-203ENST00000558958 BCE1O60756 84 aa11.14□□□□□ -0.63
CLPX-203ENST00000558958 SMR3BP02814 79 aaPredicted RBP11.14□□□□□ -0.63
CLPX-203ENST00000558958 KIAA1109Q2LD37 5005 aa11.14□□□□□ -0.63
CLPX-203ENST00000558958 B5MCH6 92 aa11.13□□□□□ -0.63
CLPX-203ENST00000558958 VAMP3Q15836 100 aa11.13□□□□□ -0.63
CLPX-203ENST00000558958 C1orf137Q5JT78 98 aa11.13□□□□□ -0.63
CLPX-203ENST00000558958 COX7BP24311 80 aa11.12□□□□□ -0.63
CLPX-203ENST00000558958 ELOF1P60002 83 aaKnown RBP11.12□□□□□ -0.63
CLPX-203ENST00000558958 FAM19A1Q7Z5A9 133 aa11.12□□□□□ -0.63
CLPX-203ENST00000558958 LINC00528Q8N1L1 170 aa11.12□□□□□ -0.63
CLPX-203ENST00000558958 BIRC6Q9NR09 4857 aa11.12□□□□□ -0.63
CLPX-203ENST00000558958 COX6CP09669 75 aa11.12□□□□□ -0.63
CLPX-203ENST00000558958 Q6ZRX8 168 aa11.11□□□□□ -0.63
CLPX-203ENST00000558958 H0YGX0 51 aa11.1□□□□□ -0.63
CLPX-203ENST00000558958 SCGB1C2P0DMR2 95 aa11.1□□□□□ -0.63
CLPX-203ENST00000558958 FAT1Q14517 4588 aa11.1□□□□□ -0.63
CLPX-203ENST00000558958 H0Y9J4 135 aa11.09□□□□□ -0.63
CLPX-203ENST00000558958 PRLHP81277 87 aa11.09□□□□□ -0.63
CLPX-203ENST00000558958 KRTAP13-1Q8IUC0 172 aa11.09□□□□□ -0.63
CLPX-203ENST00000558958 A0A1W2PPM0 123 aa11.08□□□□□ -0.64
CLPX-203ENST00000558958 UBE2AP49459 152 aa11.08□□□□□ -0.64
CLPX-203ENST00000558958 IGLV7-43P04211 117 aa11.07□□□□□ -0.64
CLPX-203ENST00000558958 RPL37AP61513 92 aaKnown RBP11.07□□□□□ -0.64
CLPX-203ENST00000558958 LINC00575Q6W349 94 aa11.06□□□□□ -0.64
CLPX-203ENST00000558958 CLEC2BQ92478 149 aa11.06□□□□□ -0.64
CLPX-203ENST00000558958 Q9BRP9 147 aa11.06□□□□□ -0.64
CLPX-203ENST00000558958 FAM218AQ96MZ4 157 aa11.06□□□□□ -0.64
CLPX-203ENST00000558958 INAFM2P0DMQ5 153 aa11.05□□□□□ -0.64
CLPX-203ENST00000558958 FABP2P12104 132 aa11.05□□□□□ -0.64
CLPX-203ENST00000558958 LYRM7Q5U5X0 104 aa11.05□□□□□ -0.64
CLPX-203ENST00000558958 ZNF861PO60384 105 aa11.04□□□□□ -0.64
CLPX-203ENST00000558958 SMCR5Q8TEV8 140 aa11.04□□□□□ -0.64
CLPX-203ENST00000558958 DHRS4-AS1Q9P1J3 65 aa11.04□□□□□ -0.64
CLPX-203ENST00000558958 KRTAP10-4P60372 401 aaPredicted RBP11.03□□□□□ -0.64
CLPX-203ENST00000558958 SLC25A20O43772 301 aa11.02□□□□□ -0.65
CLPX-203ENST00000558958 HIGD2AQ9BW72 106 aa11.02□□□□□ -0.65
CLPX-203ENST00000558958 FAM229AH3BQW9 127 aa11.01□□□□□ -0.65
CLPX-203ENST00000558958 TCL1BO95988 128 aa11.01□□□□□ -0.65
CLPX-203ENST00000558958 SRRM2Q9UQ35 2752 aaKnown RBP11.01□□□□□ -0.65
CLPX-203ENST00000558958 A0A1B0GX51 115 aa11□□□□□ -0.65
CLPX-203ENST00000558958 hADV29S1A0JD25 119 aa11□□□□□ -0.65
CLPX-203ENST00000558958 LST1O00453 97 aa11□□□□□ -0.65
CLPX-203ENST00000558958 ERC2-IT1O76042 136 aa11□□□□□ -0.65
CLPX-203ENST00000558958 TRBV20-1A0A075B6N2 111 aa11□□□□□ -0.65
CLPX-203ENST00000558958 PLA2G1BP04054 148 aaKnown RBP10.99□□□□□ -0.65
CLPX-203ENST00000558958 SNCGO76070 127 aa10.98□□□□□ -0.65
CLPX-203ENST00000558958 ATXN8Q156A1 80 aa10.98□□□□□ -0.65
CLPX-203ENST00000558958 Q5VSD8 79 aa10.98□□□□□ -0.65
CLPX-203ENST00000558958 KRTAP17-1Q9BYP8 105 aa10.98□□□□□ -0.65
CLPX-203ENST00000558958 SPCS1Q9Y6A9 102 aa10.98□□□□□ -0.65
CLPX-203ENST00000558958 TRACP01848 142 aa10.97□□□□□ -0.65
CLPX-203ENST00000558958 Q8N1X5 172 aa10.97□□□□□ -0.65
CLPX-203ENST00000558958 Q6ZQY7 126 aa10.94□□□□□ -0.66
CLPX-203ENST00000558958 K7EP34 96 aa10.93□□□□□ -0.66
CLPX-203ENST00000558958 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.93□□□□□ -0.66
CLPX-203ENST00000558958 PKHD1L1Q86WI1 4243 aa10.93□□□□□ -0.66
CLPX-203ENST00000558958 DNAL4O96015 105 aa10.93□□□□□ -0.66
CLPX-203ENST00000558958 SPINK6Q6UWN8 80 aa10.93□□□□□ -0.66
CLPX-203ENST00000558958 ST20-AS1Q8NBB2 130 aa10.93□□□□□ -0.66
CLPX-203ENST00000558958 H3BMG7 143 aa10.92□□□□□ -0.66
CLPX-203ENST00000558958 A0A1B0GV90 55 aa10.91□□□□□ -0.66
CLPX-203ENST00000558958 HERC2O95714 4834 aa10.9□□□□□ -0.66
CLPX-203ENST00000558958 LINC01547P58512 204 aaPredicted RBP10.89□□□□□ -0.67
CLPX-203ENST00000558958 GTF2H5Q6ZYL4 71 aa10.89□□□□□ -0.67
CLPX-203ENST00000558958 IGLV5-48A0A075B6I7 105 aa10.88□□□□□ -0.67
CLPX-203ENST00000558958 OCIAD2Q56VL3 154 aa10.88□□□□□ -0.67
CLPX-203ENST00000558958 SPRR4Q96PI1 79 aa10.88□□□□□ -0.67
CLPX-203ENST00000558958 ZNF706Q9Y5V0 76 aaPredicted RBP10.88□□□□□ -0.67
CLPX-203ENST00000558958 ORMDL1Q9P0S3 153 aa10.87□□□□□ -0.67
CLPX-203ENST00000558958 DEFB105AQ8NG35 78 aa10.87□□□□□ -0.67
CLPX-203ENST00000558958 C9JAW5 83 aa10.86□□□□□ -0.67
CLPX-203ENST00000558958 GAGE2AQ6NT46 116 aa10.86□□□□□ -0.67
CLPX-203ENST00000558958 Q8N377 158 aa10.86□□□□□ -0.67
CLPX-203ENST00000558958 TEX49A0A1B0GTD5 131 aa10.85□□□□□ -0.67
CLPX-203ENST00000558958 GHRHP01286 108 aa10.84□□□□□ -0.67
CLPX-203ENST00000558958 SPRR1BP22528 89 aa10.84□□□□□ -0.67
CLPX-203ENST00000558958 BAALC-AS2P0C853 105 aa10.83□□□□□ -0.68
CLPX-203ENST00000558958 LINC00483Q53H64 154 aa10.83□□□□□ -0.68
CLPX-203ENST00000558958 PPDPFLQ8WWR9 84 aa10.83□□□□□ -0.68
CLPX-203ENST00000558958 H3BQ85 93 aa10.82□□□□□ -0.68
CLPX-203ENST00000558958 TMEM256-PLSCR3K7ERE1 68 aa10.81□□□□□ -0.68
CLPX-203ENST00000558958 KRTAP1-4P0C5Y4 121 aa10.81□□□□□ -0.68
CLPX-203ENST00000558958 MTURNQ8N3F0 131 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms